Cmc08g0225061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	KH domain-containing protein
Location	CMiso1.1chr08: 15725645 .. 15725983 (+)
RNA-Seq Expression	Cmc08g0225061
Synteny	Cmc08g0225061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACTAATGTTACTTTCATTTTTTCCTTTTCACAGCCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGTTTGGAAATTCCAATGGACACATATCCGAATGTAAATTCAATAAAGAAGTGTCTCTGTATGCGGTTTCTGAAATCCTTTCAGAATGTGGATTATTTAACACTTTAATTTGTCTTATTCCTTGGATGGCAGTTCAATTTTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAAGATGTCGTGTGTAA

mRNA sequence

ATGACCACTAATGTTACTTTCATTTTTTCCTTTTCACAGCCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGTTTGGAAATTCCAATGGACACATATCCGAATGTAAATTCAATAAAGAAGTGTCTCTGTATGCGGTTTCTGAAATCCTTTCAGAATTTCAATTTTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAAGATGTCGTGTGTAA

Coding sequence (CDS)

ATGACCACTAATGTTACTTTCATTTTTTCCTTTTCACAGCCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGTTTGGAAATTCCAATGGACACATATCCGAATGTAAATTCAATAAAGAAGTGTCTCTGTATGCGGTTTCTGAAATCCTTTCAGAATTTCAATTTTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAAGATGTCGTGTGTAA

Protein sequence

MTTNVTFIFSFSQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNFVGRLLGPRGNSLKRVEATTRCRV

Homology

[Close]

BLAST of Cmc08g0225061 vs. NCBI nr
Match: TYK24899.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 44  EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 103

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 104 NFVGRLLGPRGNSLKRVEATTGCRV 110

[Close]

BLAST of Cmc08g0225061 vs. NCBI nr
Match: TYJ96583.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 44  EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 103

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 104 NFVGRLLGPRGNSLKRVEATTGCRV 110

[Close]

BLAST of Cmc08g0225061 vs. NCBI nr
Match: XP_038905003.1 (KH domain-containing protein At2g38610-like isoform X2 [Benincasa hispida])

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 54  EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 113

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 114 NFVGRLLGPRGNSLKRVEATTGCRV 120

[Close]

BLAST of Cmc08g0225061 vs. NCBI nr
Match: XP_004137670.3 (KH domain-containing protein At3g08620 [Cucumis sativus] >KGN58951.2 hypothetical protein Csa_001075 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 176 EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 235

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 236 NFVGRLLGPRGNSLKRVEATTGCRV 242

[Close]

BLAST of Cmc08g0225061 vs. NCBI nr
Match: XP_038905002.1 (KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida])

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 107 EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 166

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 167 NFVGRLLGPRGNSLKRVEATTGCRV 173

[Close]

BLAST of Cmc08g0225061 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-26
Identity = 61/86 (70.93%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 12  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQN 71
           SQ RLSG PGMTMDWQGAP SPSS+TVKRILRLEIP+D YP                  N
Sbjct: 108 SQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYP------------------N 167

Query: 72  FNFVGRLLGPRGNSLKRVEATTRCRV 98
           FNFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 168 FNFVGRLLGPRGNSLKRVEATTGCRV 175

[Close]

BLAST of Cmc08g0225061 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.4e-22
Identity = 53/83 (63.86%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 15  RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNF 74
           R+ G  GM M+WQGAPASPSS+ VKRILRL++P+DTYP                  NFNF
Sbjct: 110 RIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYP------------------NFNF 169

Query: 75  VGRLLGPRGNSLKRVEATTRCRV 98
           VGRLLGPRGNSLKRVEATT CRV
Sbjct: 170 VGRLLGPRGNSLKRVEATTGCRV 174

[Close]

BLAST of Cmc08g0225061 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-19
Identity = 49/85 (57.65%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           Q RL    G +MDWQGAP SPSS  VK+ILRL++P+D+YP                  NF
Sbjct: 107 QERLGFPQGTSMDWQGAPPSPSSHVVKKILRLDVPVDSYP------------------NF 166

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGR+LGPRGNSLKRVEA+T CRV
Sbjct: 167 NFVGRILGPRGNSLKRVEASTGCRV 173

[Close]

BLAST of Cmc08g0225061 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 8.3e-13
Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 12  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQN 71
           S+  +  +PG   +W  +P S S    KR +R++IP+D YP                  N
Sbjct: 140 SERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDIPVDNYP------------------N 199

Query: 72  FNFVGRLLGPRGNSLKRVEATTRCRV 98
           FNFVGRLLGPRGNSLKRVEA+T CRV
Sbjct: 200 FNFVGRLLGPRGNSLKRVEASTDCRV 205

[Close]

BLAST of Cmc08g0225061 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 12  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQN 71
           S+  +S +P    +W  +P S S   VKR +R++IP+D YP                  N
Sbjct: 134 SERSVSSSP--APNWLNSPGSSSGLIVKRTIRVDIPVDKYP------------------N 193

Query: 72  FNFVGRLLGPRGNSLKRVEATTRCRV 98
           +NFVGRLLGPRGNSLKRVEA+T CRV
Sbjct: 194 YNFVGRLLGPRGNSLKRVEASTDCRV 199

[Close]

BLAST of Cmc08g0225061 vs. ExPASy TrEMBL
Match: A0A5D3DNL2 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00100 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 44  EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 103

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 104 NFVGRLLGPRGNSLKRVEATTGCRV 110

[Close]

BLAST of Cmc08g0225061 vs. ExPASy TrEMBL
Match: A0A5A7TS75 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005970 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 44  EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 103

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 104 NFVGRLLGPRGNSLKRVEATTGCRV 110

[Close]

BLAST of Cmc08g0225061 vs. ExPASy TrEMBL
Match: A0A5D3BBA5 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1243G00030 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 44  EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 103

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 104 NFVGRLLGPRGNSLKRVEATTGCRV 110

[Close]

BLAST of Cmc08g0225061 vs. ExPASy TrEMBL
Match: A0A0A0LCK8 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G727970 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13  QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
           +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 64  EPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 123

Query: 73  NFVGRLLGPRGNSLKRVEATTRCRV 98
           NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 124 NFVGRLLGPRGNSLKRVEATTGCRV 130

[Close]

BLAST of Cmc08g0225061 vs. ExPASy TrEMBL
Match: A0A5A7SID7 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00410 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.9e-26
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 13 QPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNF 72
          +PRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIP+DTYP                  NF
Sbjct: 10 KPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP------------------NF 69

Query: 73 NFVGRLLGPRGNSLKRVEATTRCRV 98
          NFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 70 NFVGRLLGPRGNSLKRVEATTGCRV 76

[Close]

BLAST of Cmc08g0225061 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.1e-27
Identity = 61/86 (70.93%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 12  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQN 71
           SQ RLSG PGMTMDWQGAP SPSS+TVKRILRLEIP+D YP                  N
Sbjct: 108 SQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYP------------------N 167

Query: 72  FNFVGRLLGPRGNSLKRVEATTRCRV 98
           FNFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 168 FNFVGRLLGPRGNSLKRVEATTGCRV 175

[Close]

BLAST of Cmc08g0225061 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.1e-27
Identity = 61/86 (70.93%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 12  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQN 71
           SQ RLSG PGMTMDWQGAP SPSS+TVKRILRLEIP+D YP                  N
Sbjct: 108 SQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYP------------------N 167

Query: 72  FNFVGRLLGPRGNSLKRVEATTRCRV 98
           FNFVGRLLGPRGNSLKRVEATT CRV
Sbjct: 168 FNFVGRLLGPRGNSLKRVEATTGCRV 175

[Close]

BLAST of Cmc08g0225061 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.1e-23
Identity = 53/83 (63.86%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 15  RLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQNFNF 74
           R+ G  GM M+WQGAPASPSS+ VKRILRL++P+DTYP                  NFNF
Sbjct: 110 RIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYP------------------NFNF 169

Query: 75  VGRLLGPRGNSLKRVEATTRCRV 98
           VGRLLGPRGNSLKRVEATT CRV
Sbjct: 170 VGRLLGPRGNSLKRVEATTGCRV 174

[Close]

BLAST of Cmc08g0225061 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 74.3 bits (181), Expect = 5.9e-14
Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 12  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQN 71
           S+  +  +PG   +W  +P S S    KR +R++IP+D YP                  N
Sbjct: 140 SERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDIPVDNYP------------------N 199

Query: 72  FNFVGRLLGPRGNSLKRVEATTRCRV 98
           FNFVGRLLGPRGNSLKRVEA+T CRV
Sbjct: 200 FNFVGRLLGPRGNSLKRVEASTDCRV 205

[Close]

BLAST of Cmc08g0225061 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 73.9 bits (180), Expect = 7.7e-14
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 12  SQPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPMDTYPNVNSIKKCLCMRFLKSFQN 71
           S+  +S +P    +W  +P S S   VKR +R++IP+D YP                  N
Sbjct: 134 SERSVSSSP--APNWLNSPGSSSGLIVKRTIRVDIPVDKYP------------------N 193

Query: 72  FNFVGRLLGPRGNSLKRVEATTRCRV 98
           +NFVGRLLGPRGNSLKRVEA+T CRV
Sbjct: 194 YNFVGRLLGPRGNSLKRVEASTDCRV 199

The following BLAST results are available for this feature:

BLAST of Cmc08g0225061 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24899.1	1.4e-25	75.29	KH domain-containing protein [Cucumis melo var. makuwa]	[more]
TYJ96583.1	1.4e-25	75.29	KH domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_038905003.1	1.4e-25	75.29	KH domain-containing protein At2g38610-like isoform X2 [Benincasa hispida]	[more]
XP_004137670.3	1.4e-25	75.29	KH domain-containing protein At3g08620 [Cucumis sativus] >KGN58951.2 hypothetica...	[more]
XP_038905002.1	1.4e-25	75.29	KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida]	[more]

BLAST of Cmc08g0225061 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVI3	2.9e-26	70.93	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q8GYR4	4.4e-22	63.86	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q75GR5	2.0e-19	57.65	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	8.3e-13	46.51	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]
Q0WLR1	1.1e-12	46.51	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]

BLAST of Cmc08g0225061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNL2	6.8e-26	75.29	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7TS75	6.8e-26	75.29	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3BBA5	6.8e-26	75.29	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LCK8	6.8e-26	75.29	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G727970 PE=4 SV=...	[more]
A0A5A7SID7	8.9e-26	75.29	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Cmc08g0225061 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38610.1	2.1e-27	70.93	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	2.1e-27	70.93	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	3.1e-23	63.86	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	5.9e-14	46.51	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	7.7e-14	46.51	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 12..97 e-value: 1.5E-13 score: 53.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 63..97
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 66..97
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 18..62
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 66..97 coord: 18..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225061.1	Cmc08g0225061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding