Cmc08g0224961 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0224961
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr08: 15463531 .. 15464034 (-)
RNA-Seq Expression	Cmc08g0224961
Synteny	Cmc08g0224961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCTTGGTGAAAGAGGATATTCCAAGGGTGAGACTGACAAAACACTATTCATAAGTAGAACCGGCACTGATCTCGTTATAGCTCAAATTTATGTTGATGACATCATCTTTGGTGGATTTCCTAAAACTCTTGTTGAAAACTTCATTAACATAATGAAATCAGAATTCGAAATGAGCCTAGTAGGTGAATTGTCCTGCTTTCTGAGGTTACAGATCAAACAGATAAGTGAGGGAATGTTTATATCACAGGAGAAGTATGTCAAGAACTTAGTCAAGAAGTTTGGTCTGGATCAGTCACAACACAAAAGAACTCCTGTTGCGACTCATGCTAAAATTACGAAGAATATGGTAGGTACTGAAGTCGATCACAAATTGTACAGAAGCATGATTGGAAGCCTTTTATATTTGACAGCAAGTAGACCTGATATTGCCTATGCTGTGGGAATATGTGCTCGGTATCAGTCAGATCCTCGTACCTCTCATTTAAATACAGTTAATTAA

mRNA sequence

ATGTATCTTGGTGAAAGAGGATATTCCAAGGGTGAGACTGACAAAACACTATTCATAAGTAGAACCGGCACTGATCTCGTTATAGCTCAAATTTATGTTGATGACATCATCTTTGGTGGATTTCCTAAAACTCTTGTTGAAAACTTCATTAACATAATGAAATCAGAATTCGAAATGAGCCTAGTAGGTGAATTGTCCTGCTTTCTGAGGTTACAGATCAAACAGATAAGTGAGGGAATGTTTATATCACAGGAGAAGTATGTCAAGAACTTAGTCAAGAAGTTTGGTCTGGATCAGTCACAACACAAAAGAACTCCTGTTGCGACTCATGCTAAAATTACGAAGAATATGGTAGGTACTGAAGTCGATCACAAATTGTACAGAAGCATGATTGGAAGCCTTTTATATTTGACAGCAAGTAGACCTGATATTGCCTATGCTGTGGGAATATGTGCTCGGTATCAGTCAGATCCTCGTACCTCTCATTTAAATACAGTTAATTAA

Coding sequence (CDS)

ATGTATCTTGGTGAAAGAGGATATTCCAAGGGTGAGACTGACAAAACACTATTCATAAGTAGAACCGGCACTGATCTCGTTATAGCTCAAATTTATGTTGATGACATCATCTTTGGTGGATTTCCTAAAACTCTTGTTGAAAACTTCATTAACATAATGAAATCAGAATTCGAAATGAGCCTAGTAGGTGAATTGTCCTGCTTTCTGAGGTTACAGATCAAACAGATAAGTGAGGGAATGTTTATATCACAGGAGAAGTATGTCAAGAACTTAGTCAAGAAGTTTGGTCTGGATCAGTCACAACACAAAAGAACTCCTGTTGCGACTCATGCTAAAATTACGAAGAATATGGTAGGTACTGAAGTCGATCACAAATTGTACAGAAGCATGATTGGAAGCCTTTTATATTTGACAGCAAGTAGACCTGATATTGCCTATGCTGTGGGAATATGTGCTCGGTATCAGTCAGATCCTCGTACCTCTCATTTAAATACAGTTAATTAA

Protein sequence

MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMSLVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGTEVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTVN

Homology

[Close]

BLAST of Cmc08g0224961 vs. NCBI nr
Match: KAA0045419.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK04271.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 7.4e-83
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS
Sbjct: 121 MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 180

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT
Sbjct: 181 LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 240

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTS 162
           EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPR++
Sbjct: 241 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRST 281

[Close]

BLAST of Cmc08g0224961 vs. NCBI nr
Match: XP_016901806.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 7.2e-78
Identity = 150/166 (90.36%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYS+GE DKTLFI+RT TDL++ QIYVDDIIFGGFPKTLV+NFINIMKSEFEMS
Sbjct: 1   MYLGERGYSRGEIDKTLFINRTNTDLIVTQIYVDDIIFGGFPKTLVDNFINIMKSEFEMS 60

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMFISQEKY KNLVKKFGLDQSQHKRT VATHAKITK+MVGT
Sbjct: 61  LVGELSCFLGLQIKQGSEGMFISQEKYAKNLVKKFGLDQSQHKRTLVATHAKITKDMVGT 120

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
           EVDHKLYRSMI SLLYLTASRPDIAYAVGICA+YQSDPRTSHLN V
Sbjct: 121 EVDHKLYRSMIRSLLYLTASRPDIAYAVGICAQYQSDPRTSHLNVV 166

[Close]

BLAST of Cmc08g0224961 vs. NCBI nr
Match: KAA0054435.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK14601.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 298.5 bits (763), Expect = 3.6e-77
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGER YS+GETDKTLFI+RT T+L++AQIYVDDIIFGGFPKTLV+NFINIMKSEFEMS
Sbjct: 813 MYLGERVYSRGETDKTLFINRTSTNLIVAQIYVDDIIFGGFPKTLVDNFINIMKSEFEMS 872

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMFISQEKY KNLVKKFGLDQSQHKRTP  THAKITK+MVGT
Sbjct: 873 LVGELSCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLDQSQHKRTPAVTHAKITKDMVGT 932

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
           EVDHKLYRSMIGSLLYLT SRPDIAY VGICARYQSD RTSHLN +
Sbjct: 933 EVDHKLYRSMIGSLLYLTTSRPDIAYVVGICARYQSDSRTSHLNAI 978

[Close]

BLAST of Cmc08g0224961 vs. NCBI nr
Match: TYK08856.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.8e-76
Identity = 148/166 (89.16%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYS GE DKTLFI+RT TDL++ QIYVDDIIFGGF KTLV+NFINIMKSEFEMS
Sbjct: 176 MYLGERGYSMGEIDKTLFINRTNTDLIVTQIYVDDIIFGGFLKTLVDNFINIMKSEFEMS 235

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMFISQEKY KNLVKKFGLDQSQHKRT VATHAKITK+MVGT
Sbjct: 236 LVGELSCFLGLQIKQGSEGMFISQEKYAKNLVKKFGLDQSQHKRTLVATHAKITKDMVGT 295

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
           EVDHKLYRSMI SLLYLTASRPDIAYAVGICA+YQS+PRTSHLN V
Sbjct: 296 EVDHKLYRSMIRSLLYLTASRPDIAYAVGICAQYQSNPRTSHLNVV 341

[Close]

BLAST of Cmc08g0224961 vs. NCBI nr
Match: KAA0054623.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 8.2e-74
Identity = 144/166 (86.75%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYS+GETDKTL I+RT TDL++AQIYVDDIIFGGFPKTLV NFINIM SEFEMS
Sbjct: 562 MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMS 621

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMF+SQEKY KNLVKKFGLDQSQ+KRTP ATHAKITK+ VGT
Sbjct: 622 LVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGT 681

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
            VDHKLYRSMIGS LYL ASRPDIAYAV ICARYQSDP TSHLN V
Sbjct: 682 AVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAV 727

[Close]

BLAST of Cmc08g0224961 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-18
Identity = 48/165 (29.09%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 2    YLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMSL 61
            YL   G+    +D +LF+ + G  ++   +YVDDI+  G    L+++ ++ +   F +  
Sbjct: 1103 YLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKE 1162

Query: 62   VGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGTE 121
              +L  FL ++ K++ +G+ +SQ +Y  +L+ +  +  ++   TP+AT  K+T +     
Sbjct: 1163 HEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKL 1222

Query: 122  VDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
             D   YR ++GSL YL  +RPD++YAV   ++Y   P   H N +
Sbjct: 1223 PDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNAL 1267

[Close]

BLAST of Cmc08g0224961 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.9e-18
Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 2    YLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMSL 61
            YL   G+    +D +LF+ + G  +V   +YVDDI+  G   TL+ N ++ +   F +  
Sbjct: 1120 YLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKD 1179

Query: 62   VGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGTE 121
              EL  FL ++ K++  G+ +SQ +Y+ +L+ +  +  ++   TP+A   K++       
Sbjct: 1180 HEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKL 1239

Query: 122  VDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
             D   YR ++GSL YL  +RPDI+YAV   +++   P   HL  +
Sbjct: 1240 TDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQAL 1284

[Close]

BLAST of Cmc08g0224961 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 52/175 (29.71%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 2    YLGERGYSKGETDKTLFISR-TGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 61
            ++  + Y K  +D  ++  R +  + +I  +YVDD++  G  K L+      +   F+M 
Sbjct: 977  FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1036

Query: 62   LVGELSCFLRLQI--KQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMV 121
             +G     L ++I  ++ S  +++SQEKY++ ++++F +  ++   TP+A H K++K M 
Sbjct: 1037 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1096

Query: 122  GTEVDHK------LYRSMIGSLLY-LTASRPDIAYAVGICARYQSDPRTSHLNTV 167
             T V+ K       Y S +GSL+Y +  +RPDIA+AVG+ +R+  +P   H   V
Sbjct: 1097 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAV 1151

[Close]

BLAST of Cmc08g0224961 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-13
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 31  IYVDDIIFGGFPKTLVENFINIMKSEFEMSLVGELSCFLRLQIKQISEGMFISQEKYVKN 90
           +YVDDI+  G   TL+   I  + S F M  +G +  FL +QIK    G+F+SQ KY + 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  LVKKFGLDQSQHKRTPVATHAKITKNMVGTEV-DHKLYRSMIGSLLYLTASRPDIAYAVG 150
           ++   G+   +   TP+    K+  ++   +  D   +RS++G+L YLT +RPDI+YAV 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 151 ICARYQSDP 159
           I  +   +P
Sbjct: 125 IVCQRMHEP 131

[Close]

BLAST of Cmc08g0224961 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-12
Identity = 44/158 (27.85%), Postives = 84/158 (53.16%), Query Frame = 0


Query: 3    LGERGYSKGETDKTLFISRTG--TDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 62
            L E  +     D+ ++I   G   + +   +YVDD++      T + NF   +  +F M+
Sbjct: 1056 LKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMT 1115

Query: 63   LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 122
             + E+  F+ ++I+   + +++SQ  YVK ++ KF ++      TP+   +KI   ++ +
Sbjct: 1116 DLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLP--SKINYELLNS 1175

Query: 123  EVD-HKLYRSMIGSLLY-LTASRPDIAYAVGICARYQS 157
            + D +   RS+IG L+Y +  +RPD+  AV I +RY S
Sbjct: 1176 DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSS 1211

[Close]

BLAST of Cmc08g0224961 vs. ExPASy TrEMBL
Match: A0A5A7TW09 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4559G00240 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83
Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS
Sbjct: 121 MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 180

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT
Sbjct: 181 LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 240

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTS 162
           EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPR++
Sbjct: 241 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRST 281

[Close]

BLAST of Cmc08g0224961 vs. ExPASy TrEMBL
Match: A0A1S4E0Q2 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991414 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78
Identity = 150/166 (90.36%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYS+GE DKTLFI+RT TDL++ QIYVDDIIFGGFPKTLV+NFINIMKSEFEMS
Sbjct: 1   MYLGERGYSRGEIDKTLFINRTNTDLIVTQIYVDDIIFGGFPKTLVDNFINIMKSEFEMS 60

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMFISQEKY KNLVKKFGLDQSQHKRT VATHAKITK+MVGT
Sbjct: 61  LVGELSCFLGLQIKQGSEGMFISQEKYAKNLVKKFGLDQSQHKRTLVATHAKITKDMVGT 120

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
           EVDHKLYRSMI SLLYLTASRPDIAYAVGICA+YQSDPRTSHLN V
Sbjct: 121 EVDHKLYRSMIRSLLYLTASRPDIAYAVGICAQYQSDPRTSHLNVV 166

[Close]

BLAST of Cmc08g0224961 vs. ExPASy TrEMBL
Match: A0A5D3CS19 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001080 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGER YS+GETDKTLFI+RT T+L++AQIYVDDIIFGGFPKTLV+NFINIMKSEFEMS
Sbjct: 813 MYLGERVYSRGETDKTLFINRTSTNLIVAQIYVDDIIFGGFPKTLVDNFINIMKSEFEMS 872

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMFISQEKY KNLVKKFGLDQSQHKRTP  THAKITK+MVGT
Sbjct: 873 LVGELSCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLDQSQHKRTPAVTHAKITKDMVGT 932

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
           EVDHKLYRSMIGSLLYLT SRPDIAY VGICARYQSD RTSHLN +
Sbjct: 933 EVDHKLYRSMIGSLLYLTTSRPDIAYVVGICARYQSDSRTSHLNAI 978

[Close]

BLAST of Cmc08g0224961 vs. ExPASy TrEMBL
Match: A0A5D3CER9 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00450 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.3e-76
Identity = 148/166 (89.16%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYS GE DKTLFI+RT TDL++ QIYVDDIIFGGF KTLV+NFINIMKSEFEMS
Sbjct: 176 MYLGERGYSMGEIDKTLFINRTNTDLIVTQIYVDDIIFGGFLKTLVDNFINIMKSEFEMS 235

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMFISQEKY KNLVKKFGLDQSQHKRT VATHAKITK+MVGT
Sbjct: 236 LVGELSCFLGLQIKQGSEGMFISQEKYAKNLVKKFGLDQSQHKRTLVATHAKITKDMVGT 295

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
           EVDHKLYRSMI SLLYLTASRPDIAYAVGICA+YQS+PRTSHLN V
Sbjct: 296 EVDHKLYRSMIRSLLYLTASRPDIAYAVGICAQYQSNPRTSHLNVV 341

[Close]

BLAST of Cmc08g0224961 vs. ExPASy TrEMBL
Match: A0A5D3BY43 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00230 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.0e-74
Identity = 142/166 (85.54%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 1   MYLGERGYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMS 60
           MYLGERGYS+GETDKTLFI++T TDL++AQIYVDDIIFGGFPKTLV NFINIMKSEFEMS
Sbjct: 223 MYLGERGYSRGETDKTLFINKTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMKSEFEMS 282

Query: 61  LVGELSCFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGT 120
           LVGELSCFL LQIKQ SEGMFISQEKY KNLVKKFGL QSQ+K+TP ATH KITK+ +GT
Sbjct: 283 LVGELSCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLYQSQYKKTPAATHTKITKDTIGT 342

Query: 121 EVDHKLYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
            VDHKLYRSMIGSLLYL AS PDI YAVGIC RYQSDPRTSHLN V
Sbjct: 343 AVDHKLYRSMIGSLLYLIASIPDIDYAVGICVRYQSDPRTSHLNAV 388

[Close]

BLAST of Cmc08g0224961 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 85.5 bits (210), Expect = 4.4e-17
Identity = 51/160 (31.87%), Postives = 83/160 (51.88%), Query Frame = 0


Query: 7   GYSKGETDKTLFISRTGTDLVIAQIYVDDIIFGGFPKTLVENFINIMKSEFEMSLVGELS 66
           G+ +  +D T F+  T T  +   +YVDDII        V+   + +KS F++  +G L 
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317

Query: 67  CFLRLQIKQISEGMFISQEKYVKNLVKKFGLDQSQHKRTPVATHAKITKNMVGTEVDHKL 126
            FL L+I + + G+ I Q KY  +L+ + GL   +    P+      + +  G  VD K 
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377

Query: 127 YRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNTV 167
           YR +IG L+YL  +R DI++AV   +++   PR +H   V
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

[Close]

BLAST of Cmc08g0224961 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-14
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 31  IYVDDIIFGGFPKTLVENFINIMKSEFEMSLVGELSCFLRLQIKQISEGMFISQEKYVKN 90
           +YVDDI+  G   TL+   I  + S F M  +G +  FL +QIK    G+F+SQ KY + 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  LVKKFGLDQSQHKRTPVATHAKITKNMVGTEV-DHKLYRSMIGSLLYLTASRPDIAYAVG 150
           ++   G+   +   TP+    K+  ++   +  D   +RS++G+L YLT +RPDI+YAV 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 151 ICARYQSDP 159
           I  +   +P
Sbjct: 125 IVCQRMHEP 131

The following BLAST results are available for this feature:

BLAST of Cmc08g0224961 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045419.1	7.4e-83	98.76	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK04271.1 putative m...	[more]
XP_016901806.1	7.2e-78	90.36	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0054435.1	3.6e-77	88.55	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK14601.1 gag-pol polyprotein [...	[more]
TYK08856.1	8.8e-76	89.16	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0054623.1	8.2e-74	86.75	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0224961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	3.0e-18	29.09	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.9e-18	30.30	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	1.5e-17	29.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	2.2e-13	34.88	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	3.2e-12	27.85	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc08g0224961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TW09	3.6e-83	98.76	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4E0Q2	3.5e-78	90.36	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3CS19	1.7e-77	88.55	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G...	[more]
A0A5D3CER9	4.3e-76	89.16	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3BY43	4.0e-74	85.54	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G...	[more]

BLAST of Cmc08g0224961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.4e-17	31.88	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.6e-14	34.88	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 3..107 e-value: 2.4E-17 score: 63.4
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 6..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0224961.1	Cmc08g0224961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding