Cmc08g0223821 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0223821
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ABC transporter F family member 4-like
Location	CMiso1.1chr08: 13431423 .. 13432223 (-)
RNA-Seq Expression	Cmc08g0223821
Synteny	Cmc08g0223821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAACATTTTGTAGACCTTCTGACAATGGAGGAAACACCAGTTCAATATCTTCTTCGTCGTCATCCTGACCAAGAGAGTCTAAGCAAGCAGGAGGCTGTTCGTGCTAAGTTGGGGAAGTTTGGACTTCCAAGCCACAATCACCTCACGCCAATTGCTAAATTATCTGGGGGCCAAAAGCCAGGGTTGTTTTTACCTCAATTTCCATGTCAAAGCCTCACATATTACTGTTGGATGAACCAACGAATCACTTGGACATGCAGAGTATTGATGCACTTGCAGATGCCTTGGATGAATTCACCGGCGGAGTTGTTCTGGTTAGTCATGATTCACGACTCATTTCACGTGTGTGGGAGAATGAAGAAAAAAGTGAAATTTGGGTCGTCGAAAATGGCACTGTGGAGTTTTTCCCTGGCACTTTCGAGGAATACAAGGAAGAATTGCAAAAGGAGATTAAAGCTGAGGTTGATGATTAGAGCCAGTTATTTTGAGAAAGACGTAGCACATTCTACTTCATCCTTTTTATTAGTTTCTAAGGTCCATTTTACAATTCAAGTATTCGGATCAATGTGTTCTAATTCTGTAATCCTCCTTACGTGAAGTTGTTATAATTCGGGTTTGTACAATTAGGGAGAGAATCGTCATGAGTTTTGCTGGAGTTACTACTGTAACATATTCTATGAAAAATTTGAGCCTTCAAAATTTCATTCTGTATTAGTGCTCTCGGATTCCCCTCCAGAAAATGTATGATGTAATATATTTTATTATTTAATATATTTTGTGTTATCTGAACAATAATTATC

mRNA sequence

GCAACATTTTGTAGACCTTCTGACAATGGAGGAAACACCAGTTCAATATCTTCTTCGTCGTCATCCTGACCAAGAGAGTCTAAGCAAGCAGGAGGCTGTTCGTGCTAAGTTGGGGAAGTTTGGACTTCCAAGCCACAATCACCTCACGCCAATTGCTAAATTATCTGGGGGCCAAAAGCCAGGGTTGTTTTTACCTCAATTTCCATGTCAAAGCCTCACATATTACTGTTGGATGAACCAACGAATCACTTGGACATGCAGAGTATTGATGCACTTGCAGATGCCTTGGATGAATTCACCGGCGGAGTTGTTCTGGTTAGTCATGATTCACGACTCATTTCACGTGTGTGGGAGAATGAAGAAAAAAGTGAAATTTGGGTCGTCGAAAATGGCACTGTGGAGTTTTTCCCTGGCACTTTCGAGGAATACAAGGAAGAATTGCAAAAGGAGATTAAAGCTGAGGTTGATGATTAGAGCCAGTTATTTTGAGAAAGACGTAGCACATTCTACTTCATCCTTTTTATTAGTTTCTAAGGTCCATTTTACAATTCAAGTATTCGGATCAATGTGTTCTAATTCTGTAATCCTCCTTACGTGAAGTTGTTATAATTCGGGTTTGTACAATTAGGGAGAGAATCGTCATGAGTTTTGCTGGAGTTACTACTGTAACATATTCTATGAAAAATTTGAGCCTTCAAAATTTCATTCTGTATTAGTGCTCTCGGATTCCCCTCCAGAAAATGTATGATGTAATATATTTTATTATTTAATATATTTTGTGTTATCTGAACAATAATTATC

Coding sequence (CDS)

ATGTCAAAGCCTCACATATTACTGTTGGATGAACCAACGAATCACTTGGACATGCAGAGTATTGATGCACTTGCAGATGCCTTGGATGAATTCACCGGCGGAGTTGTTCTGGTTAGTCATGATTCACGACTCATTTCACGTGTGTGGGAGAATGAAGAAAAAAGTGAAATTTGGGTCGTCGAAAATGGCACTGTGGAGTTTTTCCCTGGCACTTTCGAGGAATACAAGGAAGAATTGCAAAAGGAGATTAAAGCTGAGGTTGATGATTAG

Protein sequence

MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVVENGTVEFFPGTFEEYKEELQKEIKAEVDD

Homology

[Close]

BLAST of Cmc08g0223821 vs. NCBI nr
Match: KAG7027450.1 (ABC transporter F family member 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174.1 bits (440), Expect = 5.4e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 709 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 768

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 769 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 797

[Close]

BLAST of Cmc08g0223821 vs. NCBI nr
Match: XP_022966192.1 (ABC transporter F family member 4-like [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 5.4e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 639 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 698

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 699 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 727

[Close]

BLAST of Cmc08g0223821 vs. NCBI nr
Match: XP_022925094.1 (ABC transporter F family member 4-like [Cucurbita moschata])

HSP 1 Score: 174.1 bits (440), Expect = 5.4e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 639 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 698

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 699 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 727

[Close]

BLAST of Cmc08g0223821 vs. NCBI nr
Match: XP_008462810.1 (PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >XP_008462811.1 PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >KAA0066330.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYK00949.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 174.1 bits (440), Expect = 5.4e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 638 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 697

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 698 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 726

[Close]

BLAST of Cmc08g0223821 vs. NCBI nr
Match: XP_004151853.3 (ABC transporter F family member 4 [Cucumis sativus] >XP_011650048.2 ABC transporter F family member 4 [Cucumis sativus] >XP_031736813.1 ABC transporter F family member 4 [Cucumis sativus] >KAE8652333.1 hypothetical protein Csa_022120 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 5.4e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 638 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 697

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 698 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 726

[Close]

BLAST of Cmc08g0223821 vs. ExPASy Swiss-Prot
Match: Q9M1H3 (ABC transporter F family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCF4 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-39
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV   EEKS+IWVV
Sbjct: 635 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCAEEEKSQIWVV 694

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           E+GTV FFPGTFEEYKE+LQ+EIKAEVD+
Sbjct: 695 EDGTVNFFPGTFEEYKEDLQREIKAEVDE 723

[Close]

BLAST of Cmc08g0223821 vs. ExPASy Swiss-Prot
Match: Q9USH9 (Uncharacterized ABC transporter ATP-binding protein C825.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC825.01 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-19
Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           M++PHILLLDEPTN LD+ +IDALADAL+ F GGVV ++HD RLI +V E     EIW+V
Sbjct: 728 MTQPHILLLDEPTNALDIDTIDALADALNNFDGGVVFITHDFRLIDQVAE-----EIWIV 787

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           +NGTV+ F G   +YK  L+++I  E ++
Sbjct: 788 QNGTVKEFDGEIRDYKMMLKQQIAKEREE 811

[Close]

BLAST of Cmc08g0223821 vs. ExPASy Swiss-Prot
Match: Q8T6B4 (ABC transporter F family member 4 OS=Dictyostelium discoideum OX=44689 GN=abcF4 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.1e-19
Identity = 45/83 (54.22%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 2    SKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV- 61
            ++PHILLLDEPTNHLD+ +I+ALA+ ++ FTGGVVL+SH+  LI+ + E     +IWVV 
Sbjct: 1058 AEPHILLLDEPTNHLDIDAIEALAEGINAFTGGVVLISHNQHLINLIAE-----QIWVVK 1117

Query: 62   ENGTVEFFPGTFEEYKEELQKEI 84
            ++GT+  +PGTF +YK E+ +EI
Sbjct: 1118 KDGTIYLYPGTFMDYKNEISREI 1135

[Close]

BLAST of Cmc08g0223821 vs. ExPASy Swiss-Prot
Match: Q9UG63 (ATP-binding cassette sub-family F member 2 OS=Homo sapiens OX=9606 GN=ABCF2 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-17
Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 4   PHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVVENG 63
           PH+L LDEPTNHLD+++IDALADA++EF GG++LVSHD RLI +V       EIWV E  
Sbjct: 535 PHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFRLIQQV-----AQEIWVCEKQ 594

Query: 64  TVEFFPGTFEEYKEELQKEIKAE 87
           T+  +PG    YKE L+ ++  E
Sbjct: 595 TITKWPGDILAYKEHLKSKLVDE 612

[Close]

BLAST of Cmc08g0223821 vs. ExPASy Swiss-Prot
Match: Q99LE6 (ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-17
Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 4   PHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVVENG 63
           PH+L LDEPTNHLD+++IDALADA++EF GG++LVSHD RLI +V       EIWV E  
Sbjct: 540 PHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFRLIQQV-----AQEIWVCEKQ 599

Query: 64  TVEFFPGTFEEYKEELQKEIKAE 87
           T+  +PG    YKE L+ ++  E
Sbjct: 600 TITKWPGDILAYKEHLKSKLVDE 617

[Close]

BLAST of Cmc08g0223821 vs. ExPASy TrEMBL
Match: A0A1S3CJD6 (ABC transporter F family member 4-like OS=Cucumis melo OX=3656 GN=LOC103501091 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 638 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 697

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 698 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 726

[Close]

BLAST of Cmc08g0223821 vs. ExPASy TrEMBL
Match: A0A5A7VGP5 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001250 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 638 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 697

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 698 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 726

[Close]

BLAST of Cmc08g0223821 vs. ExPASy TrEMBL
Match: A0A6J1HMB1 (ABC transporter F family member 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465942 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 639 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 698

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 699 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 727

[Close]

BLAST of Cmc08g0223821 vs. ExPASy TrEMBL
Match: A0A0A0LNE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431120 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 638 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 697

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 698 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 726

[Close]

BLAST of Cmc08g0223821 vs. ExPASy TrEMBL
Match: A0A6J1EB44 (ABC transporter F family member 4-like OS=Cucurbita moschata OX=3662 GN=LOC111432440 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.6e-40
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV E+EEKSEIWVV
Sbjct: 639 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVV 698

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           ENGTVEFFPGTFEEYKEELQKEIKAEVDD
Sbjct: 699 ENGTVEFFPGTFEEYKEELQKEIKAEVDD 727

[Close]

BLAST of Cmc08g0223821 vs. TAIR 10
Match: AT3G54540.1 (general control non-repressible 4 )

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-40
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVV 60
           MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRV   EEKS+IWVV
Sbjct: 635 MSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCAEEEKSQIWVV 694

Query: 61  ENGTVEFFPGTFEEYKEELQKEIKAEVDD 90
           E+GTV FFPGTFEEYKE+LQ+EIKAEVD+
Sbjct: 695 EDGTVNFFPGTFEEYKEDLQREIKAEVDE 723

[Close]

BLAST of Cmc08g0223821 vs. TAIR 10
Match: AT1G64550.1 (general control non-repressible 3 )

HSP 1 Score: 80.1 bits (196), Expect = 9.9e-16
Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 3   KPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVVEN 62
           KPH+LLLDEP+NHLD+ +++AL   L  F GG+ +VSHD  LIS         E+WVV +
Sbjct: 640 KPHLLLLDEPSNHLDLDAVEALIQGLVLFQGGICMVSHDEHLIS-----GSVDELWVVSD 699

Query: 63  GTVEFFPGTFEEYKEELQ 81
           G +  F GTF +YK+ LQ
Sbjct: 700 GRIAPFHGTFHDYKKLLQ 712

[Close]

BLAST of Cmc08g0223821 vs. TAIR 10
Match: AT5G60790.1 (ABC transporter family protein )

HSP 1 Score: 77.8 bits (190), Expect = 4.9e-15
Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 3   KPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVVEN 62
           +P++LLLDEPTNHLD+++ID+LA+AL+E+ GG+VLVSHD RLI     N+   EIWV E 
Sbjct: 516 QPNMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLI-----NQVAHEIWVCEK 575

Query: 63  GTVEFFPGTFEEYKEELQKEIKAEVDD 90
             +  + G   ++K  L  + KA ++D
Sbjct: 576 QCITKWNGDIMDFKRHL--KAKAGLED 595

[Close]

BLAST of Cmc08g0223821 vs. TAIR 10
Match: AT5G64840.1 (general control non-repressible 5 )

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-08
Identity = 32/89 (35.96%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 6   ILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWVVENGTV 65
           +L+LDEPTNHLD+ S + L +A++E+ G V+ VSHD   I ++      + +  VE+G +
Sbjct: 564 LLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQI-----VNRVIEVEDGCL 623

Query: 66  EFFPGTFEEYKE--------ELQKEIKAE 87
           E + G +  Y E        EL++E + E
Sbjct: 624 EDYAGDYNYYLEKNLDARTKELEREAELE 647

[Close]

BLAST of Cmc08g0223821 vs. TAIR 10
Match: AT5G09930.1 (ABC transporter family protein )

HSP 1 Score: 51.2 bits (121), Expect = 4.9e-07
Identity = 31/86 (36.05%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 1   MSKPH-ILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVWENEEKSEIWV 60
           M KP  +L+LDEPTNHLD+ S + L +A++E+ G V+ VSHD   I ++      + +  
Sbjct: 544 MVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQI-----VNRVIE 603

Query: 61  VENGTVEFFPGTFEEYKEELQKEIKA 86
           V +G +  + G   +Y   L+K ++A
Sbjct: 604 VRDGGLMDYAG---DYNYFLEKNVEA 621

The following BLAST results are available for this feature:

BLAST of Cmc08g0223821 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027450.1	5.4e-40	97.75	ABC transporter F family member 4, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022966192.1	5.4e-40	97.75	ABC transporter F family member 4-like [Cucurbita maxima]	[more]
XP_022925094.1	5.4e-40	97.75	ABC transporter F family member 4-like [Cucurbita moschata]	[more]
XP_008462810.1	5.4e-40	97.75	PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >XP_008462811.1...	[more]
XP_004151853.3	5.4e-40	97.75	ABC transporter F family member 4 [Cucumis sativus] >XP_011650048.2 ABC transpor...	[more]

BLAST of Cmc08g0223821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1H3	2.1e-39	89.89	ABC transporter F family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCF4 PE=2 ...	[more]
Q9USH9	1.4e-19	55.06	Uncharacterized ABC transporter ATP-binding protein C825.01 OS=Schizosaccharomyc...	[more]
Q8T6B4	7.1e-19	54.22	ABC transporter F family member 4 OS=Dictyostelium discoideum OX=44689 GN=abcF4 ...	[more]
Q9UG63	1.3e-17	54.22	ATP-binding cassette sub-family F member 2 OS=Homo sapiens OX=9606 GN=ABCF2 PE=1...	[more]
Q99LE6	1.3e-17	54.22	ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=...	[more]

BLAST of Cmc08g0223821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJD6	2.6e-40	97.75	ABC transporter F family member 4-like OS=Cucumis melo OX=3656 GN=LOC103501091 P...	[more]
A0A5A7VGP5	2.6e-40	97.75	ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1HMB1	2.6e-40	97.75	ABC transporter F family member 4-like OS=Cucurbita maxima OX=3661 GN=LOC1114659...	[more]
A0A0A0LNE5	2.6e-40	97.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431120 PE=4 SV=1	[more]
A0A6J1EB44	2.6e-40	97.75	ABC transporter F family member 4-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Cmc08g0223821 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54540.1	1.5e-40	89.89	general control non-repressible 4	[more]
AT1G64550.1	9.9e-16	50.00	general control non-repressible 3	[more]
AT5G60790.1	4.9e-15	48.28	ABC transporter family protein	[more]
AT5G64840.1	2.0e-08	35.96	general control non-repressible 5	[more]
AT5G09930.1	4.9e-07	36.05	ABC transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..89 e-value: 4.1E-19 score: 71.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..81
None	No IPR available	PANTHER	PTHR19211:SF115	BNAA06G39310D PROTEIN	coord: 1..89
None	No IPR available	PANTHER	PTHR19211	ATP-BINDING TRANSPORT PROTEIN-RELATED	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0223821.1	Cmc08g0223821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding