Cmc08g0223791 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0223791
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 13413854 .. 13414357 (+)
RNA-Seq Expression	Cmc08g0223791
Synteny	Cmc08g0223791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCATGGATTGTAGAGCCATCAACAAGATTACGGTAAAATATCGTCACCCTATACCTAGACCTGATGATATGTTAGATGAATTGCATTGATCTATTTTATTTACTAAAATTGATCTTAAGTCTGGATATCATCAGATTAGGATGAAAGTTGGAGATGAATGGAAAACTACATTTAAGACTAAGTATGGATTGTATGAGTGGTTAGTTATGCCTTTTGGTCTTACCAATGCACCTAGTACATTTATGCGTCTCATGAATCATGTTTTGCGTGAGTACATAGGAAAATTTGTAGTCGTTTACTTTGATGATATTTTGATTTATTCAAAGTCTTTAGAAATGCATGTGGAACATGTTAAACAGGTTTTGTGTGCTTTAAGAAAAGCTCAGTTGTTTGCCAATATGAAAAAGTGCGCATTTTGTCTAGATAAGATTAACTTTCTTGGGTTTGTTATTTCTGCAAATGGTATTGAAGTTGATAATGAGAAAGTTAAAGCTATCTAA

mRNA sequence

ATGTGCATGGATTGTAGAGCCATCAACAAGATTACGATTAGGATGAAAGTTGGAGATGAATGGAAAACTACATTTAAGACTAAGTATGGATTGTATGAGTGGTTAGTTATGCCTTTTGGTCTTACCAATGCACCTAGTACATTTATGCGTCTCATGAATCATGTTTTGCGTGAGTACATAGGAAAATTTGTAGTCGTTTACTTTGATGATATTTTGATTTATTCAAAGTCTTTAGAAATGCATGTGGAACATGTTAAACAGGTTTTGTGTGCTTTAAGAAAAGCTCAGTTGTTTGCCAATATGAAAAAGTGCGCATTTTGTCTAGATAAGATTAACTTTCTTGGGTTTGTTATTTCTGCAAATGGTATTGAAGTTGATAATGAGAAAGTTAAAGCTATCTAA

Coding sequence (CDS)

ATGTGCATGGATTGTAGAGCCATCAACAAGATTACGATTAGGATGAAAGTTGGAGATGAATGGAAAACTACATTTAAGACTAAGTATGGATTGTATGAGTGGTTAGTTATGCCTTTTGGTCTTACCAATGCACCTAGTACATTTATGCGTCTCATGAATCATGTTTTGCGTGAGTACATAGGAAAATTTGTAGTCGTTTACTTTGATGATATTTTGATTTATTCAAAGTCTTTAGAAATGCATGTGGAACATGTTAAACAGGTTTTGTGTGCTTTAAGAAAAGCTCAGTTGTTTGCCAATATGAAAAAGTGCGCATTTTGTCTAGATAAGATTAACTTTCTTGGGTTTGTTATTTCTGCAAATGGTATTGAAGTTGATAATGAGAAAGTTAAAGCTATCTAA

Protein sequence

MCMDCRAINKITIRMKVGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI

Homology

[Close]

BLAST of Cmc08g0223791 vs. NCBI nr
Match: XP_040994309.1 (uncharacterized protein LOC121240848 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 218.4 bits (555), Expect = 3.7e-53
Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MCMDCRAINKITIRMKVGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYI 60
           MC+DCRAIN ITIRMK GDEWKT FKTKYGLYEWLVMPFGLTNAPSTFM LMNHVLR +I
Sbjct: 496 MCVDCRAINNITIRMKEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMHLMNHVLRAFI 555

Query: 61  GKFVVVYFDDILIYSKSLEMHVEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISA 120
            +FV VYFDDILIYSK+LE HV H+K VL  LRK +LFAN+KKC FC DK+ FLGFV+S 
Sbjct: 556 SRFVGVYFDDILIYSKNLEEHVTHLKYVLEILRKERLFANLKKCTFCTDKLVFLGFVVSK 615

Query: 121 NGIEVDNEKVKAI 134
            GIEVD EKVKAI
Sbjct: 616 RGIEVDEEKVKAI 628

[Close]

BLAST of Cmc08g0223791 vs. NCBI nr
Match: XP_022158760.1 (uncharacterized protein LOC111025226 [Momordica charantia])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 107/167 (64.07%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 1   MCMDCRAINKIT----------------------------------IRMKVGDEWKTTFK 60
           MC+DCRAINKIT                                  IRM +GDEWKT FK
Sbjct: 243 MCVDCRAINKITIKYRHPIPRLDDMLDEXHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFK 302

Query: 61  TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVK 120
           TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREY+GKFVVVYFDDIL+YSKSL  HVEHV+
Sbjct: 303 TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLNEHVEHVR 362

Query: 121 QVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
            VL  L+K  L+AN+KKC+FC++K+NFLGFV+S+ G+EVD EKVKAI
Sbjct: 363 SVLNTLKKECLYANLKKCSFCMEKVNFLGFVVSSKGVEVDEEKVKAI 409

[Close]

BLAST of Cmc08g0223791 vs. NCBI nr
Match: XP_023553652.1 (uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 4.1e-52
Identity = 105/167 (62.87%), Postives = 121/167 (72.46%), Query Frame = 0


Query: 1   MCMDCRAINKIT----------------------------------IRMKVGDEWKTTFK 60
           MC+DCRAINKIT                                  IRM +GDEWKT FK
Sbjct: 728 MCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFK 787

Query: 61  TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVK 120
           TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREY+GKFVVVYFDDIL+YSKSL+ H+ HV+
Sbjct: 788 TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVR 847

Query: 121 QVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
            VL  LR   L+ N+KKC+FC++K+NFLGFV+S+NG+EVD EKVKAI
Sbjct: 848 NVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAI 894

[Close]

BLAST of Cmc08g0223791 vs. NCBI nr
Match: XP_023521183.1 (uncharacterized protein LOC111784872 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 4.1e-52
Identity = 105/167 (62.87%), Postives = 121/167 (72.46%), Query Frame = 0


Query: 1   MCMDCRAINKIT----------------------------------IRMKVGDEWKTTFK 60
           MC+DCRAINKIT                                  IRM +GDEWKT FK
Sbjct: 563 MCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFK 622

Query: 61  TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVK 120
           TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREY+GKFVVVYFDDIL+YSKSL+ H+ HV+
Sbjct: 623 TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVR 682

Query: 121 QVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
            VL  LR   L+ N+KKC+FC++K+NFLGFV+S+NG+EVD EKVKAI
Sbjct: 683 NVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAI 729

[Close]

BLAST of Cmc08g0223791 vs. NCBI nr
Match: CAN77900.1 (hypothetical protein VITISV_037350 [Vitis vinifera])

HSP 1 Score: 209.1 bits (531), Expect = 2.3e-50
Identity = 94/133 (70.68%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MCMDCRAINKITIRMKVGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYI 60
           +C+DCRAIN I ++M  GDEWKT FKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR +I
Sbjct: 486 VCVDCRAINNIMVKMNEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRVFI 545

Query: 61  GKFVVVYFDDILIYSKSLEMHVEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISA 120
            +FVVVYFDDIL+YSK+L+ H+ H+  VL  LRK +L+AN+KKC+FC+DK+ FLG+V+SA
Sbjct: 546 SRFVVVYFDDILVYSKNLDEHINHLHCVLXVLRKEKLYANLKKCSFCMDKVVFLGYVVSA 605

Query: 121 NGIEVDNEKVKAI 134
            GIEVD E VK+I
Sbjct: 606 KGIEVDEENVKSI 618

[Close]

BLAST of Cmc08g0223791 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-24
Identity = 54/121 (44.63%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 13  IRMKVGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDIL 72
           I MK  D  KT F T  G YE+L +PFGL NAP+ F R+++ +LRE+IGK   VY DDI+
Sbjct: 226 IHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDII 285

Query: 73  IYSKSLEMHVEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKA 132
           ++S+  + H ++++ VL +L KA L  N++K  F   ++ FLG++++A+GI+ D +KV+A
Sbjct: 286 VFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRA 345

Query: 133 I 134
           I
Sbjct: 346 I 346

[Close]

BLAST of Cmc08g0223791 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.0e-22
Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 22  KTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMH 81
           KT F TK+G YE+L MPFGL NAP+TF R MN +LR  + K  +VY DDI+++S SL+ H
Sbjct: 319 KTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEH 378

Query: 82  VEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
           ++ +  V   L KA L   + KC F   +  FLG V++ +GI+ + EK++AI
Sbjct: 379 LQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAI 430

[Close]

BLAST of Cmc08g0223791 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-21
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 22  KTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMH 81
           KT F TK G YE+L MPFGL NAP+TF R MN++LR  + K  +VY DDI+I+S SL  H
Sbjct: 318 KTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEH 377

Query: 82  VEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
           +  ++ V   L  A L   + KC F   + NFLG +++ +GI+ +  KVKAI
Sbjct: 378 LNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAI 429

[Close]

BLAST of Cmc08g0223791 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 0


Query: 13  IRMKVGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDIL 72
           IR++ GDE K  F+   G++E+LVMP+G++ AP+ F   +N +L E     VV Y DDIL
Sbjct: 510 IRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDIL 569

Query: 73  IYSKSLEMHVEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKA 132
           I+SKS   HV+HVK VL  L+ A L  N  KC F   ++ F+G+ IS  G     E +  
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDK 629

Query: 133 I 134
           +
Sbjct: 630 V 630

[Close]

BLAST of Cmc08g0223791 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 0


Query: 13  IRMKVGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDIL 72
           IR++ GDE K  F+   G++E+LVMP+G++ AP+ F   +N +L E     VV Y DDIL
Sbjct: 510 IRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDIL 569

Query: 73  IYSKSLEMHVEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKA 132
           I+SKS   HV+HVK VL  L+ A L  N  KC F   ++ F+G+ IS  G     E +  
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDK 629

Query: 133 I 134
           +
Sbjct: 630 V 630

[Close]

BLAST of Cmc08g0223791 vs. ExPASy TrEMBL
Match: A0A6J1DWQ2 (uncharacterized protein LOC111025226 OS=Momordica charantia OX=3673 GN=LOC111025226 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.9e-53
Identity = 107/167 (64.07%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 1   MCMDCRAINKIT----------------------------------IRMKVGDEWKTTFK 60
           MC+DCRAINKIT                                  IRM +GDEWKT FK
Sbjct: 243 MCVDCRAINKITIKYRHPIPRLDDMLDEXHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFK 302

Query: 61  TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVK 120
           TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREY+GKFVVVYFDDIL+YSKSL  HVEHV+
Sbjct: 303 TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLNEHVEHVR 362

Query: 121 QVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
            VL  L+K  L+AN+KKC+FC++K+NFLGFV+S+ G+EVD EKVKAI
Sbjct: 363 SVLNTLKKECLYANLKKCSFCMEKVNFLGFVVSSKGVEVDEEKVKAI 409

[Close]

BLAST of Cmc08g0223791 vs. ExPASy TrEMBL
Match: A5AG41 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_037350 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50
Identity = 94/133 (70.68%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MCMDCRAINKITIRMKVGDEWKTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYI 60
           +C+DCRAIN I ++M  GDEWKT FKTKYGLYEWLVMPFGLTNAPSTFMRLMNH LR +I
Sbjct: 486 VCVDCRAINNIMVKMNEGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRVFI 545

Query: 61  GKFVVVYFDDILIYSKSLEMHVEHVKQVLCALRKAQLFANMKKCAFCLDKINFLGFVISA 120
            +FVVVYFDDIL+YSK+L+ H+ H+  VL  LRK +L+AN+KKC+FC+DK+ FLG+V+SA
Sbjct: 546 SRFVVVYFDDILVYSKNLDEHINHLHCVLXVLRKEKLYANLKKCSFCMDKVVFLGYVVSA 605

Query: 121 NGIEVDNEKVKAI 134
            GIEVD E VK+I
Sbjct: 606 KGIEVDEENVKSI 618

[Close]

BLAST of Cmc08g0223791 vs. ExPASy TrEMBL
Match: A0A2N9FBE6 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12202 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 108/167 (64.67%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MCMDCRAINKIT----------------------------------IRMKVGDEWKTTFK 60
           MC+DCRAIN IT                                  IRMK GDEWKT FK
Sbjct: 613 MCVDCRAINNITVKYRHPIPRLDDMLDELHGSCVFTKIDLKSGYHQIRMKEGDEWKTAFK 672

Query: 61  TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVK 120
           TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLR +IG+FVVVYFDDILIYSK+LE HV H+K
Sbjct: 673 TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVVVYFDDILIYSKNLEEHVMHLK 732

Query: 121 QVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
            VL  LRK +LFAN+KKC FC DK+ FLGFV+S  GIEVD EKVKAI
Sbjct: 733 SVLEILRKEKLFANLKKCTFCTDKLVFLGFVVSKRGIEVDEEKVKAI 779

[Close]

BLAST of Cmc08g0223791 vs. ExPASy TrEMBL
Match: A0A2N9H7E7 (Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35605 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 108/167 (64.67%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MCMDCRAINKIT----------------------------------IRMKVGDEWKTTFK 60
           MC+DCRAIN IT                                  IRMK GDEWKT FK
Sbjct: 723 MCVDCRAINNITVKYRHPIPRLDDMLDELHGSCVFTKIDLKSGYHQIRMKEGDEWKTAFK 782

Query: 61  TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVK 120
           TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLR +IG+FVVVYFDDILIYSK+LE HV H+K
Sbjct: 783 TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVVVYFDDILIYSKNLEEHVMHLK 842

Query: 121 QVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
            VL  LRK +LFAN+KKC FC DK+ FLGFV+S  GIEVD EKVKAI
Sbjct: 843 SVLEILRKEKLFANLKKCTFCTDKLVFLGFVVSKRGIEVDEEKVKAI 889

[Close]

BLAST of Cmc08g0223791 vs. ExPASy TrEMBL
Match: A0A2N9F015 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12188 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 108/167 (64.67%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MCMDCRAINKIT----------------------------------IRMKVGDEWKTTFK 60
           MC+DCRAIN IT                                  IRMK GDEWKT FK
Sbjct: 490 MCVDCRAINNITVKYRHPIPRLDDMLDELHGSCVFTKIDLKSGYHQIRMKEGDEWKTAFK 549

Query: 61  TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYIGKFVVVYFDDILIYSKSLEMHVEHVK 120
           TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLR +IG+FVVVYFDDILIYSK+LE HV H+K
Sbjct: 550 TKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVVVYFDDILIYSKNLEEHVMHLK 609

Query: 121 QVLCALRKAQLFANMKKCAFCLDKINFLGFVISANGIEVDNEKVKAI 134
            VL  LRK +LFAN+KKC FC DK+ FLGFV+S  GIEVD EKVKAI
Sbjct: 610 SVLEILRKEKLFANLKKCTFCTDKLVFLGFVVSKRGIEVDEEKVKAI 656

The following BLAST results are available for this feature:

BLAST of Cmc08g0223791 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_040994309.1	3.7e-53	78.95	uncharacterized protein LOC121240848 [Juglans microcarpa x Juglans regia]	[more]
XP_022158760.1	1.4e-52	64.07	uncharacterized protein LOC111025226 [Momordica charantia]	[more]
XP_023553652.1	4.1e-52	62.87	uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]	[more]
XP_023521183.1	4.1e-52	62.87	uncharacterized protein LOC111784872 [Cucurbita pepo subsp. pepo]	[more]
CAN77900.1	2.3e-50	70.68	hypothetical protein VITISV_037350 [Vitis vinifera]	[more]

BLAST of Cmc08g0223791 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8I7P9	3.8e-24	44.63	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P04323	6.0e-22	46.43	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.0e-21	47.32	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	1.9e-20	42.15	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.9e-20	42.15	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0223791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWQ2	6.9e-53	64.07	uncharacterized protein LOC111025226 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A5AG41	1.1e-50	70.68	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A0A2N9FBE6	2.4e-50	64.67	Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12202 PE=4 SV=1	[more]
A0A2N9H7E7	2.4e-50	64.67	Reverse transcriptase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35605 PE=4 SV=1	[more]
A0A2N9F015	2.4e-50	64.67	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]

BLAST of Cmc08g0223791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 44..118 e-value: 3.9E-42 score: 145.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 13..43 e-value: 3.9E-42 score: 145.9
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 13..133
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 13..133
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..118 e-value: 3.78888E-54 score: 165.846
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 26..118 e-value: 3.2E-22 score: 79.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..118 score: 10.208052
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0223791.1	Cmc08g0223791.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding