Cmc08g0223661 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0223661
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr08: 13205814 .. 13206998 (+)
RNA-Seq Expression	Cmc08g0223661
Synteny	Cmc08g0223661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTAGTACTATCAATGCAGAAGTGGTCGCATTATCTCTTAGGAAGAAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTTTATTGGAGCAGAGAGAGGTGCAACCACAGTTCCAAAAGTGGTTGACCAAGCTGTTGGGATATGACTTTGAAATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTTATGCACTTTCAAGAATGGATCACTCGTTAGAATTAAAGGCAATGTCAACGGCAGGCATTGTAGACATGAAAATAGTTACAAAGGAAGTCGAGAAGGATGAAGAACTTCAACTTATAACACAACAGTTGCAGGCTGACCCGACAATGGAGGGAAAATATTCCTTGTCGAATGGCAAGCTACTGTATAAAGGAAGGGTGGTGCTGTCCAAATCTTCTTCACTTATACCCAGCCTCTTACACACTTTTCACGATTCTATATTGGGAGGACATTCGGGATTTTTGAGGACCTACAAGCGGATGAGTGGTGAGTTGTTCTGGAAAGGTATGAAGGCAGATATTAAGAAGTATGTTGAACAGTGTGGAATCTGTCAAAGAAATAAGAGTGAAGCAACCAAACCGGCAGGGGTTCTTCAACCATTACCCATACCCAACCGCATATTGAAAGATTGGACTATGGACTTCATCGAAGGGTTGCCTAAAGCAGGAGGTATGAATGTGATTATGGTGGTGGTTGACCGGCCGAGCAAATATGCTTACTTTGTCACCATGAAGCACCCGTTCTCAGCAAAGCAAGTAGCCATCGAATTCATTGATAAGATAGTTTGGAGACATGGCATTCCTAAGTCAATCATATCAGACAGAGATAAAATCTTCTTAAGCAACTTTTGGAAGGAATTATTCTATGCCATGGATACTATCCTTAAACGAAGCACCGCTTTTCATCCCCAAACCGACGGCCAGACAGAAAGGGTCAATCAGTGTTTAGAAACCTACTTAAGATGTTTTTGTAATGAGCAACCGAACAAATGGCATCAATTCATACCATGGGCAGAATTATGGTACAATACCACCTTCCATTCCTCAACACACACGACCCCCTTCCAAGCCGTGTATGGTAGACCCCCACCACCCTTGATAACCTATGGAGAGAAGAAGACACCTAATGATGAAGTTGAAACAATGCTAAAAGAGAGATTTGACGATTAG

mRNA sequence

ATGGATGTAGTACTATCAATGCAGAAGTGGTCGCATTATCTCTTAGGAAGAAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTTTATTGGAGCAGAGAGAGGTGCAACCACAGTTCCAAAAGTGGTTGACCAAGCTGTTGGGATATGACTTTGAAATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTTATGCACTTTCAAGAATGGATCACTCGTTAGAATTAAAGGCAATGTCAACGGCAGGCATTGTAGACATGAAAATAGTTACAAAGGAAGTCGAGAAGGATGAAGAACTTCAACTTATAACACAACAGTTGCAGGCTGACCCGACAATGGAGGGAAAATATTCCTTGTCGAATGGCAAGCTACTGTATAAAGGAAGGGTGGTGCTGTCCAAATCTTCTTCACTTATACCCAGCCTCTTACACACTTTTCACGATTCTATATTGGGAGGACATTCGGGATTTTTGAGGACCTACAAGCGGATGAGTGGTGAGTTGTTCTGGAAAGGTATGAAGGCAGATATTAAGAAGTATGTTGAACAGTGTGGAATCTGTCAAAGAAATAAGAGTGAAGCAACCAAACCGGCAGGGGTTCTTCAACCATTACCCATACCCAACCGCATATTGAAAGATTGGACTATGGACTTCATCGAAGGGTTGCCTAAAGCAGGAGGTATGAATGTGATTATGGTGGTGGTTGACCGGCCGAGCAAATATGCTTACTTTGTCACCATGAAGCACCCGTTCTCAGCAAAGCAAGTAGCCATCGAATTCATTGATAAGATAGTTTGGAGACATGGCATTCCTAAGTCAATCATATCAGACAGAGATAAAATCTTCTTAAGCAACTTTTGGAAGGAATTATTCTATGCCATGGATACTATCCTTAAACGAAGCACCGCTTTTCATCCCCAAACCGACGGCCAGACAGAAAGGGTCAATCAGTGTTTAGAAACCTACTTAAGATGTTTTTGTAATGAGCAACCGAACAAATGGCATCAATTCATACCATGGGCAGAATTATGGTACAATACCACCTTCCATTCCTCAACACACACGACCCCCTTCCAAGCCGTGTATGGTAGACCCCCACCACCCTTGATAACCTATGGAGAGAAGAAGACACCTAATGATGAAGTTGAAACAATGCTAAAAGAGAGATTTGACGATTAG

Coding sequence (CDS)

ATGGATGTAGTACTATCAATGCAGAAGTGGTCGCATTATCTCTTAGGAAGAAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTTTATTGGAGCAGAGAGAGGTGCAACCACAGTTCCAAAAGTGGTTGACCAAGCTGTTGGGATATGACTTTGAAATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTTATGCACTTTCAAGAATGGATCACTCGTTAGAATTAAAGGCAATGTCAACGGCAGGCATTGTAGACATGAAAATAGTTACAAAGGAAGTCGAGAAGGATGAAGAACTTCAACTTATAACACAACAGTTGCAGGCTGACCCGACAATGGAGGGAAAATATTCCTTGTCGAATGGCAAGCTACTGTATAAAGGAAGGGTGGTGCTGTCCAAATCTTCTTCACTTATACCCAGCCTCTTACACACTTTTCACGATTCTATATTGGGAGGACATTCGGGATTTTTGAGGACCTACAAGCGGATGAGTGGTGAGTTGTTCTGGAAAGGTATGAAGGCAGATATTAAGAAGTATGTTGAACAGTGTGGAATCTGTCAAAGAAATAAGAGTGAAGCAACCAAACCGGCAGGGGTTCTTCAACCATTACCCATACCCAACCGCATATTGAAAGATTGGACTATGGACTTCATCGAAGGGTTGCCTAAAGCAGGAGGTATGAATGTGATTATGGTGGTGGTTGACCGGCCGAGCAAATATGCTTACTTTGTCACCATGAAGCACCCGTTCTCAGCAAAGCAAGTAGCCATCGAATTCATTGATAAGATAGTTTGGAGACATGGCATTCCTAAGTCAATCATATCAGACAGAGATAAAATCTTCTTAAGCAACTTTTGGAAGGAATTATTCTATGCCATGGATACTATCCTTAAACGAAGCACCGCTTTTCATCCCCAAACCGACGGCCAGACAGAAAGGGTCAATCAGTGTTTAGAAACCTACTTAAGATGTTTTTGTAATGAGCAACCGAACAAATGGCATCAATTCATACCATGGGCAGAATTATGGTACAATACCACCTTCCATTCCTCAACACACACGACCCCCTTCCAAGCCGTGTATGGTAGACCCCCACCACCCTTGATAACCTATGGAGAGAAGAAGACACCTAATGATGAAGTTGAAACAATGCTAAAAGAGAGATTTGACGATTAG

Protein sequence

MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYSLSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIKKYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRPSKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPFQAVYGRPPPPLITYGEKKTPNDEVETMLKERFDD

Homology

[Close]

BLAST of Cmc08g0223661 vs. NCBI nr
Match: TYK09687.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 810.8 bits (2093), Expect = 5.0e-231
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
           MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 1   MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60

Query: 61  LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
           LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS
Sbjct: 61  LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120

Query: 121 LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
           LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK
Sbjct: 121 LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180

Query: 181 KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
           KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP
Sbjct: 181 KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240

Query: 241 SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
           SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL
Sbjct: 241 SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300

Query: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
           KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF
Sbjct: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360

Query: 361 QAVYGRPPPPLITYGEKKTPNDEVETMLKERFDD 395
           QAVYGRPPPPLITYGEKKTPNDEVETMLKERFDD
Sbjct: 361 QAVYGRPPPPLITYGEKKTPNDEVETMLKERFDD 394

[Close]

BLAST of Cmc08g0223661 vs. NCBI nr
Match: KAA0056659.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 742.7 bits (1916), Expect = 1.7e-210
Identity = 359/391 (91.82%), Postives = 375/391 (95.91%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 910  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 969

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+TQQLQ +P +EGKYS
Sbjct: 970  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLTQQLQTNPALEGKYS 1029

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+NG L+YKGRVVLSKSSSLIPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1030 LTNGTLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKEDIK 1089

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1090 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1149

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQVAIEFIDKIV RH IPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1150 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHDIPKSIISDRDKIFVSNFWKELFYAMDTIL 1209

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTA HPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1210 KRSTAVHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1269

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVETMLKER
Sbjct: 1270 QTVYGRPPPPLISYGDKKTPNDEVETMLKER 1300

[Close]

BLAST of Cmc08g0223661 vs. NCBI nr
Match: KAA0059481.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 742.7 bits (1916), Expect = 1.7e-210
Identity = 357/391 (91.30%), Postives = 376/391 (96.16%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+ QQLQ +P +EGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+NG L+YKGRVVLSKSSS+IPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQV +EFIDKIV RHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVTMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1293

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVET+LKER
Sbjct: 1294 QTVYGRPPPPLISYGDKKTPNDEVETLLKER 1324

[Close]

BLAST of Cmc08g0223661 vs. NCBI nr
Match: TYK03842.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 740.7 bits (1911), Expect = 6.4e-210
Identity = 356/391 (91.05%), Postives = 376/391 (96.16%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+ QQLQ +P +EGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+N  L+YKGRVVLSKSSS+IPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNRTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQVA+EFIDKIV RHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTAFHPQTDGQTER+NQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1234 KRSTAFHPQTDGQTERINQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1293

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVET+LKER
Sbjct: 1294 QTVYGRPPPPLISYGDKKTPNDEVETLLKER 1324

[Close]

BLAST of Cmc08g0223661 vs. NCBI nr
Match: TYK28944.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 356/391 (91.05%), Postives = 376/391 (96.16%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+ QQLQ +P +EGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYS 1053

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+NG L+YKGRVVLSKSSS+IPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQVA+EFIDKIV RHGIPKSIISDRDKIF+SNFWKELFYAM+TIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1293

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVE +LKER
Sbjct: 1294 QTVYGRPPPPLISYGDKKTPNDEVEALLKER 1324

[Close]

BLAST of Cmc08g0223661 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.6e-52
Identity = 132/406 (32.51%), Postives = 201/406 (49.51%), Query Frame = 0


Query: 3    VVLSMQKWSHYLLG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQ 62
            ++ S++ W HYL      F I++D + L  +   E      +  +W   L  ++FEI Y+
Sbjct: 759  IIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYR 818

Query: 63   PGLQNKAAYALSRM------------DHSLE-LKAMSTAGIVDMKIVTKEVEKDEELQLI 122
            PG  N  A ALSR+            D+S+  +  +S       ++VT+     + L L+
Sbjct: 819  PGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL 878

Query: 123  TQQLQADPTMEGKYSLSNGKLL-YKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYK 182
              +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G      
Sbjct: 879  NNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 938

Query: 183  RMSGELFWKGMKADIKKYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGL 242
             +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P   R  +  +MDFI  L
Sbjct: 939  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 998

Query: 243  PKAGGMNVIMVVVDRPSKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIF 302
            P++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF
Sbjct: 999  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1058

Query: 303  LSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAE 362
             S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +
Sbjct: 1059 TSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQ 1118

Query: 363  LWYNTTFHSSTHTTPFQAVYGRPP---PPLITYGEKKTPNDEVETM 388
              YN   HS+T  TPF+ V+   P   P  +     KT  +  ET+
Sbjct: 1119 QSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1161

[Close]

BLAST of Cmc08g0223661 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.6e-52
Identity = 132/406 (32.51%), Postives = 201/406 (49.51%), Query Frame = 0


Query: 3    VVLSMQKWSHYLLG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQ 62
            ++ S++ W HYL      F I++D + L  +   E      +  +W   L  ++FEI Y+
Sbjct: 759  IIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYR 818

Query: 63   PGLQNKAAYALSRM------------DHSLE-LKAMSTAGIVDMKIVTKEVEKDEELQLI 122
            PG  N  A ALSR+            D+S+  +  +S       ++VT+     + L L+
Sbjct: 819  PGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL 878

Query: 123  TQQLQADPTMEGKYSLSNGKLL-YKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYK 182
              +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G      
Sbjct: 879  NNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 938

Query: 183  RMSGELFWKGMKADIKKYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGL 242
             +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P   R  +  +MDFI  L
Sbjct: 939  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 998

Query: 243  PKAGGMNVIMVVVDRPSKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIF 302
            P++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF
Sbjct: 999  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1058

Query: 303  LSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAE 362
             S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +
Sbjct: 1059 TSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQ 1118

Query: 363  LWYNTTFHSSTHTTPFQAVYGRPP---PPLITYGEKKTPNDEVETM 388
              YN   HS+T  TPF+ V+   P   P  +     KT  +  ET+
Sbjct: 1119 QSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1161

[Close]

BLAST of Cmc08g0223661 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.6e-52
Identity = 132/406 (32.51%), Postives = 201/406 (49.51%), Query Frame = 0


Query: 3    VVLSMQKWSHYLLG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQ 62
            ++ S++ W HYL      F I++D + L  +   E      +  +W   L  ++FEI Y+
Sbjct: 759  IIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYR 818

Query: 63   PGLQNKAAYALSRM------------DHSLE-LKAMSTAGIVDMKIVTKEVEKDEELQLI 122
            PG  N  A ALSR+            D+S+  +  +S       ++VT+     + L L+
Sbjct: 819  PGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL 878

Query: 123  TQQLQADPTMEGKYSLSNGKLL-YKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYK 182
              +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G      
Sbjct: 879  NNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 938

Query: 183  RMSGELFWKGMKADIKKYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGL 242
             +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P   R  +  +MDFI  L
Sbjct: 939  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 998

Query: 243  PKAGGMNVIMVVVDRPSKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIF 302
            P++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF
Sbjct: 999  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1058

Query: 303  LSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAE 362
             S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +
Sbjct: 1059 TSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQ 1118

Query: 363  LWYNTTFHSSTHTTPFQAVYGRPP---PPLITYGEKKTPNDEVETM 388
              YN   HS+T  TPF+ V+   P   P  +     KT  +  ET+
Sbjct: 1119 QSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1161

[Close]

BLAST of Cmc08g0223661 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.6e-52
Identity = 132/406 (32.51%), Postives = 201/406 (49.51%), Query Frame = 0


Query: 3    VVLSMQKWSHYLLG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQ 62
            ++ S++ W HYL      F I++D + L  +   E      +  +W   L  ++FEI Y+
Sbjct: 759  IIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYR 818

Query: 63   PGLQNKAAYALSRM------------DHSLE-LKAMSTAGIVDMKIVTKEVEKDEELQLI 122
            PG  N  A ALSR+            D+S+  +  +S       ++VT+     + L L+
Sbjct: 819  PGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL 878

Query: 123  TQQLQADPTMEGKYSLSNGKLL-YKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYK 182
              +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G      
Sbjct: 879  NNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 938

Query: 183  RMSGELFWKGMKADIKKYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGL 242
             +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P   R  +  +MDFI  L
Sbjct: 939  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 998

Query: 243  PKAGGMNVIMVVVDRPSKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIF 302
            P++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF
Sbjct: 999  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1058

Query: 303  LSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAE 362
             S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +
Sbjct: 1059 TSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQ 1118

Query: 363  LWYNTTFHSSTHTTPFQAVYGRPP---PPLITYGEKKTPNDEVETM 388
              YN   HS+T  TPF+ V+   P   P  +     KT  +  ET+
Sbjct: 1119 QSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1161

[Close]

BLAST of Cmc08g0223661 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.6e-52
Identity = 132/406 (32.51%), Postives = 201/406 (49.51%), Query Frame = 0


Query: 3    VVLSMQKWSHYLLG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQ 62
            ++ S++ W HYL      F I++D + L  +   E      +  +W   L  ++FEI Y+
Sbjct: 759  IIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYR 818

Query: 63   PGLQNKAAYALSRM------------DHSLE-LKAMSTAGIVDMKIVTKEVEKDEELQLI 122
            PG  N  A ALSR+            D+S+  +  +S       ++VT+     + L L+
Sbjct: 819  PGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL 878

Query: 123  TQQLQADPTMEGKYSLSNGKLL-YKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYK 182
              +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G      
Sbjct: 879  NNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 938

Query: 183  RMSGELFWKGMKADIKKYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGL 242
             +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P   R  +  +MDFI  L
Sbjct: 939  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 998

Query: 243  PKAGGMNVIMVVVDRPSKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIF 302
            P++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF
Sbjct: 999  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1058

Query: 303  LSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAE 362
             S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +
Sbjct: 1059 TSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQ 1118

Query: 363  LWYNTTFHSSTHTTPFQAVYGRPP---PPLITYGEKKTPNDEVETM 388
              YN   HS+T  TPF+ V+   P   P  +     KT  +  ET+
Sbjct: 1119 QSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI 1161

[Close]

BLAST of Cmc08g0223661 vs. ExPASy TrEMBL
Match: A0A5D3CCG2 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00950 PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 2.4e-231
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
           MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 1   MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60

Query: 61  LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
           LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS
Sbjct: 61  LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120

Query: 121 LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
           LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK
Sbjct: 121 LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180

Query: 181 KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
           KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP
Sbjct: 181 KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240

Query: 241 SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
           SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL
Sbjct: 241 SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300

Query: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
           KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF
Sbjct: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360

Query: 361 QAVYGRPPPPLITYGEKKTPNDEVETMLKERFDD 395
           QAVYGRPPPPLITYGEKKTPNDEVETMLKERFDD
Sbjct: 361 QAVYGRPPPPLITYGEKKTPNDEVETMLKERFDD 394

[Close]

BLAST of Cmc08g0223661 vs. ExPASy TrEMBL
Match: A0A5A7UT21 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001910 PE=4 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 8.2e-211
Identity = 359/391 (91.82%), Postives = 375/391 (95.91%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 910  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 969

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+TQQLQ +P +EGKYS
Sbjct: 970  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLTQQLQTNPALEGKYS 1029

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+NG L+YKGRVVLSKSSSLIPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1030 LTNGTLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKEDIK 1089

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1090 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1149

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQVAIEFIDKIV RH IPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1150 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHDIPKSIISDRDKIFVSNFWKELFYAMDTIL 1209

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTA HPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1210 KRSTAVHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1269

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVETMLKER
Sbjct: 1270 QTVYGRPPPPLISYGDKKTPNDEVETMLKER 1300

[Close]

BLAST of Cmc08g0223661 vs. ExPASy TrEMBL
Match: A0A5A7V194 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002120 PE=4 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 8.2e-211
Identity = 357/391 (91.30%), Postives = 376/391 (96.16%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+ QQLQ +P +EGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+NG L+YKGRVVLSKSSS+IPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQV +EFIDKIV RHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVTMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1293

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVET+LKER
Sbjct: 1294 QTVYGRPPPPLISYGDKKTPNDEVETLLKER 1324

[Close]

BLAST of Cmc08g0223661 vs. ExPASy TrEMBL
Match: A0A5D3BYA1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00360 PE=4 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 3.1e-210
Identity = 356/391 (91.05%), Postives = 376/391 (96.16%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+ QQLQ +P +EGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+N  L+YKGRVVLSKSSS+IPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNRTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQVA+EFIDKIV RHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTAFHPQTDGQTER+NQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1234 KRSTAFHPQTDGQTERINQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1293

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVET+LKER
Sbjct: 1294 QTVYGRPPPPLISYGDKKTPNDEVETLLKER 1324

[Close]

BLAST of Cmc08g0223661 vs. ExPASy TrEMBL
Match: A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 6.9e-210
Identity = 356/391 (91.05%), Postives = 376/391 (96.16%), Query Frame = 0


Query: 1    MDVVLSMQKWSHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            M VVLS+QKW HYLLGRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAAYALSRMDHSLELKAMSTAGIVDMKIVTKEVEKDEELQLITQQLQADPTMEGKYS 120
            LQNKAA ALSRMDHS+ELKA+ST GIVDM++VTKEVEKDEELQL+ QQLQ +P +EGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYS 1053

Query: 121  LSNGKLLYKGRVVLSKSSSLIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKADIK 180
            L+NG L+YKGRVVLSKSSS+IPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCGICQRNKSEATKPAGVLQPLPIPNRILKDWTMDFIEGLPKAGGMNVIMVVVDRP 240
            KYVEQC ICQRNKSEATKPAGVLQPLPIP+RIL+DWTMDFIEGLPKAGGMNVIMVVVDR 
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKHPFSAKQVAIEFIDKIVWRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMKHPFSAKQVA+EFIDKIV RHGIPKSIISDRDKIF+SNFWKELFYAM+TIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTHTTPF 360
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSST TTPF
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPF 1293

Query: 361  QAVYGRPPPPLITYGEKKTPNDEVETMLKER 392
            Q VYGRPPPPLI+YG+KKTPNDEVE +LKER
Sbjct: 1294 QTVYGRPPPPLISYGDKKTPNDEVEALLKER 1324

The following BLAST results are available for this feature:

BLAST of Cmc08g0223661 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK09687.1	5.0e-231	100.00	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0056659.1	1.7e-210	91.82	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0059481.1	1.7e-210	91.30	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK03842.1	6.4e-210	91.05	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK28944.1	1.4e-209	91.05	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0223661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.6e-52	32.51	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.6e-52	32.51	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.6e-52	32.51	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.6e-52	32.51	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.6e-52	32.51	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0223661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCG2	2.4e-231	100.00	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7UT21	8.2e-211	91.82	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7V194	8.2e-211	91.30	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BYA1	3.1e-210	91.05	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3E325	6.9e-210	91.05	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc08g0223661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 138..194 e-value: 4.9E-18 score: 64.9
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 3..51 e-value: 3.1E-9 score: 37.1
None	No IPR available	GENE3D	1.10.340.70		coord: 102..193 e-value: 1.9E-16 score: 62.0
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 18..362
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 203..392 e-value: 1.3E-48 score: 166.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 203..367 score: 20.812504
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 205..367
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0223661.1	Cmc08g0223661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding