Cmc08g0223491 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0223491
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr08: 13000087 .. 13001109 (-)
RNA-Seq ExpressionCmc08g0223491
SyntenyCmc08g0223491
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCTAGTAAACTACTCGACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCCTCTGAACCAGTAGTAAGGGAGTACCCTGATGTCTTCTCCGACGAGCTCCCAAGACTTTCGCCTCCCAGAGAGATAGACTTCGCCATTGAATTAGAGCCAGACACTGCTCCTATCTCGAGAGCCCCTTACAGAAGGGCTCCAGCCGAGCTAAAGGAGATGAAGGTCCAGCTGCAGGAGTTGCTGGACAAGGGTTTCATCCGACCCAGTGCGTCACCTTGGGGAGCCCCAGTGTTGTTTGTGAAGAAGAAGGATGAGTCGATGCGCCTTTACATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAAAATCGCTATCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCTAAGACGGCTTTCCGTTCGAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCCCCTGCGGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCATTCGTCATAGTTTTCATTGACGACATCTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTTTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGCGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACGGTTAACGAGATTCGTAGTTTCCTGGGCTTGGCAAGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCTTTAACCCAGTTGACCAGAAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTACGAGAGTAGCTTCTAG

mRNA sequence

ATGAAGGCTAGTAAACTACTCGACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCCTCTGAACCAGTAGTAAGGGAGTACCCTGATGTCTTCTCCGACGAGCTCCCAAGACTTTCGCCTCCCAGAGAGATAGACTTCGCCATTGAATTAGAGCCAGACACTGCTCCTATCTCGAGAGCCCCTTACAGAAGGGCTCCAGCCGAGCTAAAGGAGATGAAGGTCCAGCTGCAGGAGTTGCTGGACAAGGGTTTCATCCGACCCAGTGCGTCACCTTGGGGAGCCCCAGTGTTGTTTGTGAAGAAGAAGGATGAGTCGATGCGCCTTTACATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAAAATCGCTATCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCTAAGACGGCTTTCCGTTCGAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCCCCTGCGGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCATTCGTCATAGTTTTCATTGACGACATCTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTTTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGCGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACGGTTAACGAGATTCGTAGTTTCCTGGGCTTGGCAAGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCTTTAACCCAGTTGACCAGAAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTACGAGAGTAGCTTCTAG

Coding sequence (CDS)

ATGAAGGCTAGTAAACTACTCGACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCCTCTGAACCAGTAGTAAGGGAGTACCCTGATGTCTTCTCCGACGAGCTCCCAAGACTTTCGCCTCCCAGAGAGATAGACTTCGCCATTGAATTAGAGCCAGACACTGCTCCTATCTCGAGAGCCCCTTACAGAAGGGCTCCAGCCGAGCTAAAGGAGATGAAGGTCCAGCTGCAGGAGTTGCTGGACAAGGGTTTCATCCGACCCAGTGCGTCACCTTGGGGAGCCCCAGTGTTGTTTGTGAAGAAGAAGGATGAGTCGATGCGCCTTTACATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAAAATCGCTATCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCTAAGACGGCTTTCCGTTCGAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCCCCTGCGGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCATTCGTCATAGTTTTCATTGACGACATCTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTACGCCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTTTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGCGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACGGTTAACGAGATTCGTAGTTTCCTGGGCTTGGCAAGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCTTTAACCCAGTTGACCAGAAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTACGAGAGTAGCTTCTAG

Protein sequence

MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIELEPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVLETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFLGLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF
Homology
[Close]
BLAST of Cmc08g0223491 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 641.7 bits (1654), Expect = 3.5e-180
Identity = 319/340 (93.82%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVFSDELP L PPRE+DFAIEL
Sbjct: 533 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFSDELPGLPPPREVDFAIEL 592

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 593 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 652

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 653 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 712

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 713 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 772

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EI+SFL
Sbjct: 773 ETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFL 832

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTRKGTPFVWSPA ESSF
Sbjct: 833 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 872

[Close]
BLAST of Cmc08g0223491 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 641.0 bits (1652), Expect = 6.0e-180
Identity = 318/340 (93.53%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVF DELP L PPRE+DFAIEL
Sbjct: 498 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 558 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 618 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 678 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EIRSFL
Sbjct: 738 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTRKGTPFVWSPA ESSF
Sbjct: 798 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 837

[Close]
BLAST of Cmc08g0223491 vs. NCBI nr
Match: KAA0050727.1 (pol protein [Cucumis melo var. makuwa] >TYJ95692.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 640.6 bits (1651), Expect = 7.8e-180
Identity = 321/340 (94.41%), Postives = 327/340 (96.18%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL+QGTWGILASVVDTREPEVSLSSEPVVREYP+VF DELP LSPPREIDFAIEL
Sbjct: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPNVFPDELPGLSPPREIDFAIEL 60

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EPDTAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 61  EPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNK+TVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY
Sbjct: 121 DYRELNKLTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEFIVMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 181 GHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
            TLRAN+LYAKFSKCEFWLKKV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL
Sbjct: 241 VTLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRI SPLTQLTRKGTPFVWSPA ESSF
Sbjct: 301 GLAGYYRRFVEDFSRITSPLTQLTRKGTPFVWSPACESSF 340

[Close]
BLAST of Cmc08g0223491 vs. NCBI nr
Match: KAA0058812.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 639.0 bits (1647), Expect = 2.3e-179
Identity = 316/340 (92.94%), Postives = 325/340 (95.59%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVF DELP L PPRE+DFAIEL
Sbjct: 413 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 472

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 473 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 532

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SRY
Sbjct: 533 DYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRY 592

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEF+VMSFGLTNAPAVFMDLMNRVFKDF+DSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 593 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVL 652

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EIRSFL
Sbjct: 653 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 712

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTRKGTPFVWSPA ESSF
Sbjct: 713 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 752

[Close]
BLAST of Cmc08g0223491 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 638.6 bits (1646), Expect = 3.0e-179
Identity = 318/340 (93.53%), Postives = 325/340 (95.59%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVF DELP L PPRE+DFAIEL
Sbjct: 486 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 545

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 546 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 605

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR RY
Sbjct: 606 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRY 665

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 666 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 725

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EIRSFL
Sbjct: 726 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 785

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTR+GTPFVWSP  ESSF
Sbjct: 786 GLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPTCESSF 825

[Close]
BLAST of Cmc08g0223491 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.8e-58
Identity = 112/314 (35.67%), Postives = 193/314 (61.46%), Query Frame = 0 

Query: 33  VVREYPDVFSDELPRLSPPREIDFAIELEPDTAPISRAPYRRAPAELKEMKVQLQELLDK 92
           ++++Y D+   E  +L+   +    I  + +    S+  Y +A  +  E++ Q+Q++L++
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQ--EVESQIQDMLNQ 235

Query: 93  GFIRPSASPWGAPVLFVKKKDES-----MRLYIDYRELNKVTVKNRYPLPRIDDLFDQLQ 152
           G IR S SP+ +P+  V KK ++      R+ IDYR+LN++TV +R+P+P +D++  +L 
Sbjct: 236 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 295

Query: 153 GATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF 212
               F+ IDL  G+HQ+ +    + KTAF +++GHYE++ M FGL NAPA F   MN + 
Sbjct: 296 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDIL 355

Query: 213 KDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVLETLRANRLYAKFSKCEFWLKKVSFLGH 272
           +  L+   +V++DDI+++S +  EH + L  V E L    L  +  KCEF  ++ +FLGH
Sbjct: 356 RPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGH 415

Query: 273 VVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFLGLASYYRRFVEDFSRIASPLTQLTRKG 332
           V++ +G+  +P KIEA+  +P P+   EI++FLGL  YYR+F+ +F+ IA P+T+  +K 
Sbjct: 416 VLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKN 475

Query: 333 TPF-VWSPAYESSF 341
                 +P Y+S+F
Sbjct: 476 MKIDTTNPEYDSAF 487

[Close]
BLAST of Cmc08g0223491 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.6e-57
Identity = 105/269 (39.03%), Postives = 169/269 (62.83%), Query Frame = 0 

Query: 65  APISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDES-----MRLY 124
           +PI    Y  A     E++ Q+QE+L++G IR S SP+ +P   V KK ++      R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 125 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSR 184
           IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 185 YGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQV 244
            GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   ++ V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 245 LETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSF 304
              L    L  +  KCEF  K+ +FLGH+V+ +G+  +P K++A+ ++P P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 305 LGLASYYRRFVEDFSRIASPLTQLTRKGT 329
           LGL  YYR+F+ +++ IA P+T   +K T
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRT 473

[Close]
BLAST of Cmc08g0223491 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.6e-57
Identity = 111/298 (37.25%), Postives = 182/298 (61.07%), Query Frame = 0 

Query: 36  EYPDVFSDELPRLSPPREIDFAIELEPDT---APISRAPYRRAPAELKEMKVQLQELLDK 95
           E+P +F   L  +S    ++ A++ E  T    PI    Y        E++ Q+ ELL  
Sbjct: 94  EFPRIFEPPLSGMS----VETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQD 153

Query: 96  GFIRPSASPWGAPVLFVKKK-----DESMRLYIDYRELNKVTVKNRYPLPRIDDLFDQLQ 155
           G IRPS SP+ +P+  V KK     ++  R+ +D++ LN VT+ + YP+P I+     L 
Sbjct: 154 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLG 213

Query: 156 GATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF 215
            A  F+ +DL SG+HQ+ +++SDIPKTAF +  G YEF+ + FGL NAPA+F  +++ + 
Sbjct: 214 NAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDIL 273

Query: 216 KDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVLETLRANRLYAKFSKCEFWLKKVSFLGH 275
           ++ +     V+IDDI+++S+    H ++LR VL +L    L     K  F   +V FLG+
Sbjct: 274 REHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGY 333

Query: 276 VVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFLGLASYYRRFVEDFSRIASPLTQLTR 326
           +V+++G+  DP K+ A++  P P++V E++ FLG+ SYYR+F++D++++A PLT LTR
Sbjct: 334 IVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTR 387

[Close]
BLAST of Cmc08g0223491 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.6e-56
Identity = 110/317 (34.70%), Postives = 189/317 (59.62%), Query Frame = 0 

Query: 22  REPEVSLSSEPVVREYPDVF----SDELPRLSPPREIDFAIELEPDTAPISRAPYRRAPA 81
           +EPE+      + +E+ D+     +++LP+  P + ++F +EL  +   +    Y   P 
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLPK--PIKGLEFEVELTQENYRLPIRNYPLPPG 429

Query: 82  ELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYIDYRELNKVTVKNRYPLP 141
           +++ M  ++ + L  G IR S +    PV+FV KK+ ++R+ +DY+ LNK    N YPLP
Sbjct: 430 KMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 489

Query: 142 RIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPA 201
            I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR   G +E++VM +G++ APA
Sbjct: 490 LIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPA 549

Query: 202 VFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVLETLRANRLYAKFSKCEF 261
            F   +N +  +  +S V+ ++DDILI+SK+E+EH +H++ VL+ L+   L    +KCEF
Sbjct: 550 HFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 609

Query: 262 WLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFLGLASYYRRFVEDFSRIA 321
              +V F+G+ +S +G +     I+ V  W +P    E+R FLG  +Y R+F+   S++ 
Sbjct: 610 HQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLT 669

Query: 322 SPLTQLTRKGTPFVWSP 335
            PL  L +K   + W+P
Sbjct: 670 HPLNNLLKKDVRWKWTP 680

[Close]
BLAST of Cmc08g0223491 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.6e-56
Identity = 110/317 (34.70%), Postives = 189/317 (59.62%), Query Frame = 0 

Query: 22  REPEVSLSSEPVVREYPDVF----SDELPRLSPPREIDFAIELEPDTAPISRAPYRRAPA 81
           +EPE+      + +E+ D+     +++LP+  P + ++F +EL  +   +    Y   P 
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLPK--PIKGLEFEVELTQENYRLPIRNYPLPPG 429

Query: 82  ELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYIDYRELNKVTVKNRYPLP 141
           +++ M  ++ + L  G IR S +    PV+FV KK+ ++R+ +DY+ LNK    N YPLP
Sbjct: 430 KMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 489

Query: 142 RIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPA 201
            I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR   G +E++VM +G++ APA
Sbjct: 490 LIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPA 549

Query: 202 VFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVLETLRANRLYAKFSKCEF 261
            F   +N +  +  +S V+ ++DDILI+SK+E+EH +H++ VL+ L+   L    +KCEF
Sbjct: 550 HFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 609

Query: 262 WLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFLGLASYYRRFVEDFSRIA 321
              +V F+G+ +S +G +     I+ V  W +P    E+R FLG  +Y R+F+   S++ 
Sbjct: 610 HQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLT 669

Query: 322 SPLTQLTRKGTPFVWSP 335
            PL  L +K   + W+P
Sbjct: 670 HPLNNLLKKDVRWKWTP 680

[Close]
BLAST of Cmc08g0223491 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 1.7e-180
Identity = 319/340 (93.82%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVFSDELP L PPRE+DFAIEL
Sbjct: 533 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFSDELPGLPPPREVDFAIEL 592

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 593 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 652

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 653 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 712

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 713 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 772

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EI+SFL
Sbjct: 773 ETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFL 832

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTRKGTPFVWSPA ESSF
Sbjct: 833 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 872

[Close]
BLAST of Cmc08g0223491 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.9e-180
Identity = 318/340 (93.53%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVF DELP L PPRE+DFAIEL
Sbjct: 498 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 558 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRY
Sbjct: 618 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 678 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EIRSFL
Sbjct: 738 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTRKGTPFVWSPA ESSF
Sbjct: 798 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 837

[Close]
BLAST of Cmc08g0223491 vs. ExPASy TrEMBL
Match: A0A5D3B768 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00190 PE=4 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 3.8e-180
Identity = 321/340 (94.41%), Postives = 327/340 (96.18%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL+QGTWGILASVVDTREPEVSLSSEPVVREYP+VF DELP LSPPREIDFAIEL
Sbjct: 1   MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPNVFPDELPGLSPPREIDFAIEL 60

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EPDTAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 61  EPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNK+TVKNRYPLPRIDDLFDQLQ ATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY
Sbjct: 121 DYRELNKLTVKNRYPLPRIDDLFDQLQEATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEFIVMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 181 GHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
            TLRAN+LYAKFSKCEFWLKKV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL
Sbjct: 241 VTLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRI SPLTQLTRKGTPFVWSPA ESSF
Sbjct: 301 GLAGYYRRFVEDFSRITSPLTQLTRKGTPFVWSPACESSF 340

[Close]
BLAST of Cmc08g0223491 vs. ExPASy TrEMBL
Match: A0A5A7USG7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002890 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.1e-179
Identity = 316/340 (92.94%), Postives = 325/340 (95.59%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVF DELP L PPRE+DFAIEL
Sbjct: 413 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 472

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 473 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 532

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SRY
Sbjct: 533 DYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRY 592

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEF+VMSFGLTNAPAVFMDLMNRVFKDF+DSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 593 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVL 652

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EIRSFL
Sbjct: 653 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 712

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTRKGTPFVWSPA ESSF
Sbjct: 713 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 752

[Close]
BLAST of Cmc08g0223491 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-179
Identity = 318/340 (93.53%), Postives = 325/340 (95.59%), Query Frame = 0 

Query: 1   MKASKLLDQGTWGILASVVDTREPEVSLSSEPVVREYPDVFSDELPRLSPPREIDFAIEL 60
           MKASKLL QGTWGILASVVD REPEVSLSSEPVVREYPDVF DELP L PPRE+DFAIEL
Sbjct: 486 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 545

Query: 61  EPDTAPISRAPYRRAPAELKEMKVQLQELLDKGFIRPSASPWGAPVLFVKKKDESMRLYI 120
           EP TAPISRAPYR APAELKE+KVQLQELLDKGFIRPS SPWGAPVLFVKKKD SMRL I
Sbjct: 546 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 605

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR RY
Sbjct: 606 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRY 665

Query: 181 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLRQVL 240
           GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL QVL
Sbjct: 666 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 725

Query: 241 ETLRANRLYAKFSKCEFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVNEIRSFL 300
           ETLRAN+LYAKFSKCEFWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTV+EIRSFL
Sbjct: 726 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 785

Query: 301 GLASYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAYESSF 341
           GLA YYRRFVEDFSRIASPLTQLTR+GTPFVWSP  ESSF
Sbjct: 786 GLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPTCESSF 825

[Close]
BLAST of Cmc08g0223491 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-21
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 0 

Query: 235 HLRQVLETLRANRLYAKFSKCEFWLKKVSFLG--HVVSSEGVSVDPAKIEAVTNWPRPST 294
           HL  VL+    ++ YA   KC F   ++++LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 VNEIRSFLGLASYYRRFVEDFSRIASPLTQLTRKGT 329
             E+R FLGL  YYRRFV+++ +I  PLT+L +K +
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS 98

The following BLAST results are available for this feature:
BLAST of Cmc08g0223491 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0040547.13.5e-18093.82pol protein [Cucumis melo var. makuwa][more]
KAA0060745.16.0e-18093.53pol protein [Cucumis melo var. makuwa][more]
KAA0050727.17.8e-18094.41pol protein [Cucumis melo var. makuwa] >TYJ95692.1 pol protein [Cucumis melo var... [more]
KAA0058812.12.3e-17992.94pol protein [Cucumis melo var. makuwa][more]
TYK01306.13.0e-17993.53pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc08g0223491 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P043237.8e-5835.67Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208256.6e-5739.03Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P96.6e-5737.25Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P0CT415.6e-5634.70Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT345.6e-5634.70Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of Cmc08g0223491 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TG621.7e-18093.82Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26... [more]
A0A5A7V4E42.9e-18093.53Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72... [more]
A0A5D3B7683.8e-18094.41Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00190 PE... [more]
A0A5A7USG71.1e-17992.94Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33... [more]
A0A5D3BSV91.4e-17993.53Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82... [more]
BLAST of Cmc08g0223491 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.12.7e-2145.83DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 279..340
e-value: 1.8E-22
score: 81.1
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 134..269
e-value: 3.7E-92
score: 309.4
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 55..194
e-value: 3.7E-92
score: 309.4
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 63..338
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 63..338
NoneNo IPR availableCDDcd01647RT_LTRcoord: 93..269
e-value: 2.20858E-97
score: 284.103
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 109..268
e-value: 1.0E-27
score: 97.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 90..269
score: 11.212503
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 33..340

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0223491.1Cmc08g0223491.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding