Cmc08g0223441 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0223441
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr08: 12915242 .. 12915616 (+)
RNA-Seq Expression	Cmc08g0223441
Synteny	Cmc08g0223441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAATTCAAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTAATATTTCCTTTGCTGTTAGTGCTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAATATATGGAAGTTGTTAACAGAATCCTGAGATTCTTGAAAAATACATCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAACACCATTGAGGCAAATACTGACTCGGATTGGGCAGGATCTGTTATTGACAGAAAGTCTACCTCCGGATATTGTACCTTTGTTTGGGCAATCTTGTAA

mRNA sequence

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAATTCAAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTAATATTTCCTTTGCTGTTAGTGCTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAATATATGGAAGTTGTTAACAGAATCCTGAGATTCTTGAAAAATACATCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAACACCATTGAGGCAAATACTGACTCGGATTGGGCAGGATCTGTTATTGACAGAAAGTCTACCTCCGGATATTGTACCTTTGTTTGGGCAATCTTGTAA

Coding sequence (CDS)

ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAATTCAAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTAATATTTCCTTTGCTGTTAGTGCTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAATATATGGAAGTTGTTAACAGAATCCTGAGATTCTTGAAAAATACATCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAACACCATTGAGGCAAATACTGACTCGGATTGGGCAGGATCTGTTATTGACAGAAAGTCTACCTCCGGATATTGTACCTTTGTTTGGGCAATCTTGTAA

Protein sequence

MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQAPYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFVWAIL

Homology

[Close]

BLAST of Cmc08g0223441 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WAIL 125
            W  L
Sbjct: 1473 WGNL 1476

[Close]

BLAST of Cmc08g0223441 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1327 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1386

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1387 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1446

Query: 121  WAIL 125
            W  L
Sbjct: 1447 WGNL 1450

[Close]

BLAST of Cmc08g0223441 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WAIL 125
            W  L
Sbjct: 1473 WGNL 1476

[Close]

BLAST of Cmc08g0223441 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WAIL 125
            W  L
Sbjct: 1473 WGNL 1476

[Close]

BLAST of Cmc08g0223441 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1385 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1444

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1445 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1504

Query: 121  WAIL 125
            W  L
Sbjct: 1505 WGNL 1508

[Close]

BLAST of Cmc08g0223441 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.6e-19
Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            M+  +P  TP+  + KL         D  +Y+ +VG L YL+ TRP+IS+AV+ +SQFM 
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMH 1274

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
             P E++++ + RILR+L  T   G+  +K N  ++ A +D+DWAG   D  ST+GY  ++
Sbjct: 1275 MPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

[Close]

BLAST of Cmc08g0223441 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.4e-18
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQIQV-DKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFM 60
           ML C+P  TP+    KL +S    +  D   ++ +VG L YL+ TRP+IS+AV+ V Q M
Sbjct: 71  MLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRM 130

Query: 61  QAPYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTF 120
             P     +++ R+LR++K T   GL   K ++  ++A  DSDWAG    R+ST+G+CTF
Sbjct: 131 HEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 189

[Close]

BLAST of Cmc08g0223441 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-17
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            ML  +P  TP+  + KL         D  +Y+ +VG L YL+ TRP++S+AV+ +SQ+M 
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMH 1257

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
             P + +   + R+LR+L  T   G+  +K N  ++ A +D+DWAG   D  ST+GY  ++
Sbjct: 1258 MPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYL 1317

[Close]

BLAST of Cmc08g0223441 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11
Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 1    MLGCRPADTPI--EFNCKLGNSDDQIQVDKEQYQRLVGKLIYLS-HTRPNISFAVSAVSQ 60
            M  C    TP+  + N +L NSD+         + L+G L+Y+   TRP+++ AV+ +S+
Sbjct: 1152 MENCNAVSTPLPSKINYELLNSDEDCNT---PCRSLIGCLMYIMLCTRPDLTTAVNILSR 1211

Query: 61   FMQAPYEKYMEVVNRILRFLKNTSGKGLMFRK--TNRNTIEANTDSDWAGSVIDRKSTSG 117
            +      +  + + R+LR+LK T    L+F+K     N I    DSDWAGS IDRKST+G
Sbjct: 1212 YSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTG 1269

[Close]

BLAST of Cmc08g0223441 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 42/123 (34.15%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNS------DDQIQVDKEQYQRLVGKLIY-LSHTRPNISFAVS 60
            M   +P  TP+  + KL         +++  + K  Y   VG L+Y +  TRP+I+ AV 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 61   AVSQFMQAPYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKST 117
             VS+F++ P +++ E V  ILR+L+ T+G  L F  ++   ++  TD+D AG + +RKS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSS 1194

[Close]

BLAST of Cmc08g0223441 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.1e-58
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WAIL 125
            W  L
Sbjct: 1473 WGNL 1476

[Close]

BLAST of Cmc08g0223441 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.1e-58
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WAIL 125
            W  L
Sbjct: 1473 WGNL 1476

[Close]

BLAST of Cmc08g0223441 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.1e-58
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WAIL 125
            W  L
Sbjct: 1473 WGNL 1476

[Close]

BLAST of Cmc08g0223441 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.1e-58
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1    MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
            MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
            APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WAIL 125
            W  L
Sbjct: 1473 WGNL 1476

[Close]

BLAST of Cmc08g0223441 vs. ExPASy TrEMBL
Match: A0A5D3D7S1 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00430 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.1e-58
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
           MLGCRPADTPIEFNCKLGNSDDQ+ VDKEQYQRLVGKLIYLSHTRP+ISFAVS VSQFMQ
Sbjct: 27  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 86

Query: 61  APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
           APYEK+ME VNRILR+LKNT GKGLMFRKTNR TIEA TDSDWAGSVIDRKSTSGYCTFV
Sbjct: 87  APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 146

Query: 121 WAIL 125
           W  L
Sbjct: 147 WGNL 150

[Close]

BLAST of Cmc08g0223441 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 6.0e-19
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQIQV-DKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFM 60
           ML C+P  TP+    KL +S    +  D   ++ +VG L YL+ TRP+IS+AV+ V Q M
Sbjct: 71  MLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRM 130

Query: 61  QAPYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTF 120
             P     +++ R+LR++K T   GL   K ++  ++A  DSDWAG    R+ST+G+CTF
Sbjct: 131 HEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 189

[Close]

BLAST of Cmc08g0223441 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 88.2 bits (217), Expect = 5.1e-18
Identity = 42/120 (35.00%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 1   MLGCRPADTPIEFNCKLGNSDDQIQVDKEQYQRLVGKLIYLSHTRPNISFAVSAVSQFMQ 60
           +LGC+P+  P++ +           VD + Y+RL+G+L+YL  TR +ISFAV+ +SQF +
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407

Query: 61  APYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEANTDSDWAGSVIDRKSTSGYCTFV 120
           AP   + + V +IL ++K T G+GL +       ++  +D+ +      R+ST+GYC F+
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

[Close]

BLAST of Cmc08g0223441 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 39  IYLSHTRPNISFAVSAVSQFMQAPYEKYMEVVNRILRFLKNTSGKGLMFRKTNRNTIEAN 98
           +YL+ TRP+++FAV+ +SQF  A     M+ V ++L ++K T G+GL +  T+   ++A 
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 99  TDSDWAGSVIDRKSTSGYCTFV 121
            DSDWA     R+S +G+C+ V
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc08g0223441 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99952.1	1.0e-57	90.32	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	1.0e-57	90.32	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	1.0e-57	90.32	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	1.0e-57	90.32	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	1.0e-57	90.32	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0223441 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	7.6e-19	38.33	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	8.4e-18	39.67	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZT94	4.2e-17	35.83	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.2e-11	37.19	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	2.0e-11	34.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc08g0223441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJK7	5.1e-58	90.32	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	5.1e-58	90.32	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	5.1e-58	90.32	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	5.1e-58	90.32	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]
A0A5D3D7S1	5.1e-58	90.32	Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cmc08g0223441 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	6.0e-19	39.67	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	5.1e-18	35.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	3.2e-12	39.02	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 26..119
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 26..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0223441.1	Cmc08g0223441.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding