Cmc08g0222931 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0222931
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribonuclease H
Location	CMiso1.1chr08: 12067910 .. 12069115 (+)
RNA-Seq Expression	Cmc08g0222931
Synteny	Cmc08g0222931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTGACAAGGAAAGTGACGATGAAGATGATGTGGGAATATCCTCAGAATTGTTAAGAATGGTAGAAGAAGAAGATGAGGTTTTAGGTCCTCACCAAGAACTAGTTGAAGCAATAAATTTGGGTTCTCAAGAGGAGTCAAAAGAGGTAAAAATTGGCACATCATTGACCAGTGAATCACGGAAAAAACTGATCAATTTGTTACGTGAGTATTCATATATTTTTGCTTGGAGTTATCAGGATCTGCCAAGATTAAGTACGGATATTGTAGTACACCGAGTTCCTTTAAAATCAGAATGCAACCTAGTGAGACAAAAGCTACGTAAAATGAAACCTGATGTACTGATTAAAATAAAGGAGGAAGTACAGAAGCAAATTGAAGCAGGATTCCTCACAGTCTCCAAATATCCTAAATGGGTGGCAAACATTGTTCTAGTGCCCAAAAAAGACGAAAAAGGGAGAATGTGTGTGGATTATAGAGATTTAAATCGAGCCAGTCCAAAAGATAACTTCCCTTTACCTCATATCGACATGTTGGTGGATAACACTGCAGGATACTCAACTTTCTCATTCATGGATGGTTTTTCAGGATATAATCAGATCAAAATGGCTGAAGAAGATAGAGAAAAAACGACATTCATTACCCTTTGGGGAACATTCTGCTACAAAGAAATGCCTTTTGGTTTGAAAAATGTTGGGGCAACATATCACCGAGCAATGGTTACACTTTTTCATGATATGATGCATAAAAAAATAGAGGTGTATGTTGATGATATGATCGCAAAATCCAAGGCAGATGAAGATCATACAAGTACACTCAAAAAATTATTTGATCGGTTGAGAAAATATCAATTGAAATTAAATCCATCCAAATATACATTTGGGGCAACCTCAGGAAAGCTACTGGGATTCATCGTCAGTGAAGAAGGGATCAAAGTAGACCCAGATAAAGTAAGGGCTACCATGGAAATGGCATCCCTTAAAACAGAAAAAGAAATTCGAGGTTTGCTAGGAAGATTGAACTACATATCCAGATTTATCTCACATTTAACACCAACATGCAAACCAATCTTCAAGCTCTTACGTAAAAACAACCCAGGAAAATGGGATGAAGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATTTGCAGAGCCCACCAGTACTGATACCTCCAACTCTAGGGCAATCTTGTATTTAA

mRNA sequence

ATGGAATCTGACAAGGAAAGTGACGATGAAGATGATGTGGGAATATCCTCAGAATTGTTAAGAATGGTAGAAGAAGAAGATGAGGTTTTAGGTCCTCACCAAGAACTAGTTGAAGCAATAAATTTGGGTTCTCAAGAGGAGTCAAAAGAGGTAAAAATTGGCACATCATTGACCAGTGAATCACGGAAAAAACTGATCAATTTGTTACGTGAGTATTCATATATTTTTGCTTGGAGTTATCAGGATCTGCCAAGATTAAGTACGGATATTGTAGTACACCGAGTTCCTTTAAAATCAGAATGCAACCTAGTGAGACAAAAGCTACGTAAAATGAAACCTGATGTACTGATTAAAATAAAGGAGGAAGTACAGAAGCAAATTGAAGCAGGATTCCTCACAGTCTCCAAATATCCTAAATGGGTGGCAAACATTGTTCTAGTGCCCAAAAAAGACGAAAAAGGGAGAATGTGTGTGGATTATAGAGATTTAAATCGAGCCAGTCCAAAAGATAACTTCCCTTTACCTCATATCGACATGTTGGTGGATAACACTGCAGGATACTCAACTTTCTCATTCATGGATGGTTTTTCAGGATATAATCAGATCAAAATGGCTGAAGAAGATAGAGAAAAAACGACATTCATTACCCTTTGGGGAACATTCTGCTACAAAGAAATGCCTTTTGGTTTGAAAAATGTTGGGGCAACATATCACCGAGCAATGGTTACACTTTTTCATGATATGATGCATAAAAAAATAGAGGTGTATGTTGATGATATGATCGCAAAATCCAAGGCAGATGAAGATCATACAAGTACACTCAAAAAATTATTTGATCGGTTGAGAAAATATCAATTGAAATTAAATCCATCCAAATATACATTTGGGGCAACCTCAGGAAAGCTACTGGGATTCATCGTCAGTGAAGAAGGGATCAAAGTAGACCCAGATAAAGTAAGGGCTACCATGGAAATGGCATCCCTTAAAACAGAAAAAGAAATTCGAGGTTTGCTAGGAAGATTGAACTACATATCCAGATTTATCTCACATTTAACACCAACATGCAAACCAATCTTCAAGCTCTTACGTAAAAACAACCCAGGAAAATGGGATGAAGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATTTGCAGAGCCCACCAGTACTGATACCTCCAACTCTAGGGCAATCTTGTATTTAA

Coding sequence (CDS)

ATGGAATCTGACAAGGAAAGTGACGATGAAGATGATGTGGGAATATCCTCAGAATTGTTAAGAATGGTAGAAGAAGAAGATGAGGTTTTAGGTCCTCACCAAGAACTAGTTGAAGCAATAAATTTGGGTTCTCAAGAGGAGTCAAAAGAGGTAAAAATTGGCACATCATTGACCAGTGAATCACGGAAAAAACTGATCAATTTGTTACGTGAGTATTCATATATTTTTGCTTGGAGTTATCAGGATCTGCCAAGATTAAGTACGGATATTGTAGTACACCGAGTTCCTTTAAAATCAGAATGCAACCTAGTGAGACAAAAGCTACGTAAAATGAAACCTGATGTACTGATTAAAATAAAGGAGGAAGTACAGAAGCAAATTGAAGCAGGATTCCTCACAGTCTCCAAATATCCTAAATGGGTGGCAAACATTGTTCTAGTGCCCAAAAAAGACGAAAAAGGGAGAATGTGTGTGGATTATAGAGATTTAAATCGAGCCAGTCCAAAAGATAACTTCCCTTTACCTCATATCGACATGTTGGTGGATAACACTGCAGGATACTCAACTTTCTCATTCATGGATGGTTTTTCAGGATATAATCAGATCAAAATGGCTGAAGAAGATAGAGAAAAAACGACATTCATTACCCTTTGGGGAACATTCTGCTACAAAGAAATGCCTTTTGGTTTGAAAAATGTTGGGGCAACATATCACCGAGCAATGGTTACACTTTTTCATGATATGATGCATAAAAAAATAGAGGTGTATGTTGATGATATGATCGCAAAATCCAAGGCAGATGAAGATCATACAAGTACACTCAAAAAATTATTTGATCGGTTGAGAAAATATCAATTGAAATTAAATCCATCCAAATATACATTTGGGGCAACCTCAGGAAAGCTACTGGGATTCATCGTCAGTGAAGAAGGGATCAAAGTAGACCCAGATAAAGTAAGGGCTACCATGGAAATGGCATCCCTTAAAACAGAAAAAGAAATTCGAGGTTTGCTAGGAAGATTGAACTACATATCCAGATTTATCTCACATTTAACACCAACATGCAAACCAATCTTCAAGCTCTTACGTAAAAACAACCCAGGAAAATGGGATGAAGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATTTGCAGAGCCCACCAGTACTGATACCTCCAACTCTAGGGCAATCTTGTATTTAA

Protein sequence

MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI

Homology

[Close]

BLAST of Cmc08g0222931 vs. NCBI nr
Match: XP_031739260.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus])

HSP 1 Score: 713.8 bits (1841), Expect = 8.5e-202
Identity = 355/401 (88.53%), Postives = 376/401 (93.77%), Query Frame = 0


Query: 1    MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
            MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE
Sbjct: 1241 MESDKESDDENAGRISSELLRLVEEEDKVLGPHQELVEVINLGSQEESKEVKIGTSMTSE 1300

Query: 61   SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
            +RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK ECN VRQKLRKMKPD+LIKIK
Sbjct: 1301 TRKKIINLLREYSDIFAWSYQDMPGLNTDIVVHRVPLKPECNPVRQKLRKMKPDILIKIK 1360

Query: 121  EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
            EEVQKQIEAGFLTVSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDML
Sbjct: 1361 EEVQKQIEAGFLTVSKYPEWVANIVPVPKKDGKVRMCVDYRDLNRASPKDNFPLPHIDML 1420

Query: 181  VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
            VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RA
Sbjct: 1421 VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKVMPFGLKNAGATYQRA 1480

Query: 241  MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
            MVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Sbjct: 1481 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1540

Query: 301  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
            KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFK
Sbjct: 1541 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1600

Query: 361  LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            LLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  I
Sbjct: 1601 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRXLI 1641

[Close]

BLAST of Cmc08g0222931 vs. NCBI nr
Match: XP_031738551.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus])

HSP 1 Score: 710.3 bits (1832), Expect = 9.4e-201
Identity = 353/401 (88.03%), Postives = 375/401 (93.52%), Query Frame = 0


Query: 1    MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
            MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE
Sbjct: 1512 MESDKESDDENAGRISSELLRLVEEEDKVLGPHQELVEVINLGSQEESKEVKIGTSMTSE 1571

Query: 61   SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
            +RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK ECN VRQKLRKMKPD+LIK+K
Sbjct: 1572 TRKKIINLLREYSDIFAWSYQDMPGLNTDIVVHRVPLKPECNPVRQKLRKMKPDILIKMK 1631

Query: 121  EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
            EEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDML
Sbjct: 1632 EEVQKQIEAGFLIVSKYPEWVANIVPVPKKDGKVRMCVDYRDLNRASPKDNFPLPHIDML 1691

Query: 181  VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
            VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RA
Sbjct: 1692 VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKVMPFGLKNAGATYQRA 1751

Query: 241  MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
            MVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Sbjct: 1752 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1811

Query: 301  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
            KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFK
Sbjct: 1812 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1871

Query: 361  LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            LLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  I
Sbjct: 1872 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLI 1912

[Close]

BLAST of Cmc08g0222931 vs. NCBI nr
Match: XP_031741698.1 (uncharacterized protein LOC116403895 [Cucumis sativus])

HSP 1 Score: 710.3 bits (1832), Expect = 9.4e-201
Identity = 353/401 (88.03%), Postives = 375/401 (93.52%), Query Frame = 0


Query: 1    MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
            MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE
Sbjct: 1179 MESDKESDDENAGRISSELLRLVEEEDKVLGPHQELVEVINLGSQEESKEVKIGTSMTSE 1238

Query: 61   SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
            +RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK ECN VRQKLRKMKPD+LIK+K
Sbjct: 1239 TRKKIINLLREYSDIFAWSYQDMPGLNTDIVVHRVPLKPECNPVRQKLRKMKPDILIKMK 1298

Query: 121  EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
            EEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDML
Sbjct: 1299 EEVQKQIEAGFLIVSKYPEWVANIVPVPKKDGKMRMCVDYRDLNRASPKDNFPLPHIDML 1358

Query: 181  VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
            VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RA
Sbjct: 1359 VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKVMPFGLKNAGATYQRA 1418

Query: 241  MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
            MVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Sbjct: 1419 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1478

Query: 301  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
            KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFK
Sbjct: 1479 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1538

Query: 361  LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            LLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  I
Sbjct: 1539 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLI 1579

[Close]

BLAST of Cmc08g0222931 vs. NCBI nr
Match: XP_031741309.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus])

HSP 1 Score: 710.3 bits (1832), Expect = 9.4e-201
Identity = 353/401 (88.03%), Postives = 375/401 (93.52%), Query Frame = 0


Query: 1    MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
            MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE
Sbjct: 1165 MESDKESDDENAGRISSELLRLVEEEDKVLGPHQELVEVINLGSQEESKEVKIGTSMTSE 1224

Query: 61   SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
            +RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK ECN VRQKLRKMKPD+LIK+K
Sbjct: 1225 TRKKIINLLREYSDIFAWSYQDMPGLNTDIVVHRVPLKPECNPVRQKLRKMKPDILIKMK 1284

Query: 121  EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
            EEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDML
Sbjct: 1285 EEVQKQIEAGFLIVSKYPEWVANIVPVPKKDGKVRMCVDYRDLNRASPKDNFPLPHIDML 1344

Query: 181  VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
            VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RA
Sbjct: 1345 VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKVMPFGLKNAGATYQRA 1404

Query: 241  MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
            MVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Sbjct: 1405 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1464

Query: 301  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
            KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFK
Sbjct: 1465 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1524

Query: 361  LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            LLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  I
Sbjct: 1525 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLI 1565

[Close]

BLAST of Cmc08g0222931 vs. NCBI nr
Match: XP_031738857.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus])

HSP 1 Score: 710.3 bits (1832), Expect = 9.4e-201
Identity = 353/401 (88.03%), Postives = 375/401 (93.52%), Query Frame = 0


Query: 1    MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
            MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE
Sbjct: 1179 MESDKESDDENAGRISSELLRLVEEEDKVLGPHQELVEVINLGSQEESKEVKIGTSMTSE 1238

Query: 61   SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
            +RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK ECN VRQKLRKMKPD+LIK+K
Sbjct: 1239 TRKKIINLLREYSDIFAWSYQDMPGLNTDIVVHRVPLKPECNPVRQKLRKMKPDILIKMK 1298

Query: 121  EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
            EEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDML
Sbjct: 1299 EEVQKQIEAGFLIVSKYPEWVANIVPVPKKDGKVRMCVDYRDLNRASPKDNFPLPHIDML 1358

Query: 181  VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
            VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RA
Sbjct: 1359 VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKVMPFGLKNAGATYQRA 1418

Query: 241  MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
            MVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Sbjct: 1419 MVTLFHDMMHKEIEVYVDDMIAKSKANEDHTTILQKLFDRLRKYQLKLNPSKCTFGATSG 1478

Query: 301  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
            KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFK
Sbjct: 1479 KLLGFIVSEEGIKVDPDKVKAIMDMPSPETEKEVRAFLGRLNYISRFISHLTPTCEPIFK 1538

Query: 361  LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            LLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  I
Sbjct: 1539 LLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLI 1579

[Close]

BLAST of Cmc08g0222931 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-42
Identity = 109/316 (34.49%), Postives = 167/316 (52.85%), Query Frame = 0


Query: 82  DLPRLSTDI----VVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKY 141
           DLP    DI    V H + +K    L R +   +      +I + VQK ++  F+  SK 
Sbjct: 571 DLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKS 630

Query: 142 PKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFS 201
           P   + +VLVPKKD   R+CVDYR LN+A+  D FPLP ID L+        F+ +D  S
Sbjct: 631 P-CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHS 690

Query: 202 GYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYV 261
           GY+QI M  +DR KT F+T  G + Y  MPFGL N  +T+ R M   F D+  + + VY+
Sbjct: 691 GYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYL 750

Query: 262 DDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPD 321
           DD++  S++ E+H   L  + +RL+   L +   K  F +   + LG+ +  + I     
Sbjct: 751 DDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQH 810

Query: 322 KVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEA 381
           K  A  +  + KT K+ +  LG +NY  RFI + +   +PI   +   +  +W E  ++A
Sbjct: 811 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFI--CDKSQWTEKQDKA 870

Query: 382 FNKIKQYLQSPPVLIP 394
            +K+K  L + PVL+P
Sbjct: 871 IDKLKDALCNSPVLVP 881

[Close]

BLAST of Cmc08g0222931 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.9e-42
Identity = 109/316 (34.49%), Postives = 166/316 (52.53%), Query Frame = 0


Query: 82  DLPRLSTDI----VVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKY 141
           DLP    DI    V H + +K    L R +   +      +I + VQK ++  F+  SK 
Sbjct: 597 DLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKS 656

Query: 142 PKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFS 201
           P   + +VLVPKKD   R+CVDYR LN+A+  D FPLP ID L+        F+ +D  S
Sbjct: 657 P-CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHS 716

Query: 202 GYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYV 261
           GY+QI M  +DR KT F+T  G + Y  MPFGL N  +T+ R M   F D+  + + VY+
Sbjct: 717 GYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYL 776

Query: 262 DDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPD 321
           DD++  S++ E+H   L  + +RL+   L +   K  F +   + LG+ +  + I     
Sbjct: 777 DDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQH 836

Query: 322 KVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEA 381
           K  A  +  + KT K+ +  LG +NY  RFI + +   +PI   +   +  +W E  ++A
Sbjct: 837 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFI--CDKSQWTEKQDKA 896

Query: 382 FNKIKQYLQSPPVLIP 394
             K+K  L + PVL+P
Sbjct: 897 IEKLKAALCNSPVLVP 907

[Close]

BLAST of Cmc08g0222931 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.1e-38
Identity = 104/345 (30.14%), Postives = 174/345 (50.43%), Query Frame = 0


Query: 57  LTSESRKKLINLLREYSYIFAWSYQDLPRLS-TDIVVHRVPLKSECNLVRQKLRKMKPDV 116
           L +E +++L  LL++Y  I    Y +  +L+ T+   H +  K   NL            
Sbjct: 165 LNNEEKQRLCALLQKYHDI---QYHEGDKLTFTNQTKHTINTKH--NLPLYSKYSYPQAY 224

Query: 117 LIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKD-----EKGRMCVDYRDLNRASPKD 176
             +++ ++Q  +  G +  S  P + + I +VPKK      +K R+ +DYR LN  +  D
Sbjct: 225 EQEVESQIQDMLNQGIIRTSNSP-YNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGD 284

Query: 177 NFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGL 236
             P+P++D ++      + F+ +D   G++QI+M  E   KT F T  G + Y  MPFGL
Sbjct: 285 RHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGL 344

Query: 237 KNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNP 296
           KN  AT+ R M  +   +++K   VY+DD+I  S + ++H  +L  +F++L K  LKL  
Sbjct: 345 KNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQL 404

Query: 297 SKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISH 356
            K  F       LG +++ +GIK +P+K+ A  +       KEI+  LG   Y  +FI +
Sbjct: 405 DKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPN 464

Query: 357 LTPTCKPIFKLLRKN-NPGKWDEDCEEAFNKIKQYLQSPPVLIPP 395
                KP+ K L+KN      + + + AF K+K  +   P+L  P
Sbjct: 465 FADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVP 503

[Close]

BLAST of Cmc08g0222931 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.4e-36
Identity = 108/371 (29.11%), Postives = 180/371 (48.52%), Query Frame = 0


Query: 34  QELVEAINLGSQEESKEVKIG----TSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTD 93
           Q   E+I    QE  K++         L  E   KL  LL ++  +    Y++  +L+  
Sbjct: 136 QRTPESIASSDQESIKKLDFSQFRLDHLNQEETFKLKGLLNKFRNL---EYKEGEKLTFT 195

Query: 94  IVVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPK 153
             +  V   +  + +  K   +     I+++ +VQ+ +  G +  S  P + +   +VPK
Sbjct: 196 NTIKHVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSP-YNSPTWVVPK 255

Query: 154 KDE-----KGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKM 213
           K +     K R+ +DYR LN  +  D +P+P++D ++        F+ +D   G++QI+M
Sbjct: 256 KPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEM 315

Query: 214 AEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKS 273
            EE   KT F T  G + Y  MPFGL+N  AT+ R M  +   +++K   VY+DD+I  S
Sbjct: 316 DEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFS 375

Query: 274 KADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATME 333
            +  +H ++++ +F +L    LKL   K  F       LG IV+ +GIK +P KV+A + 
Sbjct: 376 TSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVS 435

Query: 334 MASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDE-DCEEAFNKIKQ 393
                 +KEIR  LG   Y  +FI +     KP+   L+K       + +  EAF K+K 
Sbjct: 436 YPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKA 495

Query: 394 YLQSPPVLIPP 395
            +   P+L  P
Sbjct: 496 LIIRDPILQLP 502

[Close]

BLAST of Cmc08g0222931 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.2e-35
Identity = 97/298 (32.55%), Postives = 152/298 (51.01%), Query Frame = 0


Query: 117 IKIKEEVQKQIEA----GFLTVSKYPKWVANIVLVPKK-----DEKGRMCVDYRDLNRAS 176
           + ++ EV++QI+     G +  S  P + + I +VPKK     +++ RM VD++ LN  +
Sbjct: 133 VNMRGEVERQIDELLQDGIIRPSNSP-YNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVT 192

Query: 177 PKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMP 236
             D +P+P I+  + +      F+ +D  SG++QI M E D  KT F TL G + +  +P
Sbjct: 193 IPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLP 252

Query: 237 FGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLK 296
           FGLKN  A + R +  +  + + K   VY+DD+I  S+  + H   L+ +   L K  L+
Sbjct: 253 FGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQ 312

Query: 297 LNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRF 356
           +N  K  F  T  + LG+IV+ +GIK DP KVRA  EM    + KE++  LG  +Y  +F
Sbjct: 313 VNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKF 372

Query: 357 ISHLTPTCKPIFKLLR-----------KNNPGKWDEDCEEAFNKIKQYLQSPPVLIPP 395
           I       KP+  L R              P   DE   ++FN +K  L S  +L  P
Sbjct: 373 IQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFP 429

[Close]

BLAST of Cmc08g0222931 vs. ExPASy TrEMBL
Match: A0A5A7VK41 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00790 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 1.1e-181
Identity = 334/401 (83.29%), Postives = 344/401 (85.79%), Query Frame = 0


Query: 1   MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
           M+ DKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKE          
Sbjct: 487 MKFDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKE---------- 546

Query: 61  SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
                                D+  LSTDIVVHRVPLK ECN VRQKLRKMKPDVLIKIK
Sbjct: 547 ---------------------DMSGLSTDIVVHRVPLKPECNPVRQKLRKMKPDVLIKIK 606

Query: 121 EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
           EEVQKQIEAGFLTV KYP+WVANIV VPKKD K RMCVDYRDLNRASPKDN PLPHIDML
Sbjct: 607 EEVQKQIEAGFLTVFKYPEWVANIVPVPKKDGKVRMCVDYRDLNRASPKDNLPLPHIDML 666

Query: 181 VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
           V+NTAGYSTFSFMDGFSGYNQIKMAEEDREK TFITLWGTF YK MPFGLKNVGATY RA
Sbjct: 667 VNNTAGYSTFSFMDGFSGYNQIKMAEEDREKMTFITLWGTFYYKVMPFGLKNVGATYQRA 726

Query: 241 MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
           MVTLFHDMMHK+IEVYVDDMIAKSKADEDHT TL+KLFDRLRKYQLK NPSK TFGATSG
Sbjct: 727 MVTLFHDMMHKEIEVYVDDMIAKSKADEDHTITLQKLFDRLRKYQLKFNPSKCTFGATSG 786

Query: 301 KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
           KLLGFIVSEEGIKVDPDKVRA MEM+S K EKEIRG LGRLNYISRFISHLTPTC+ IFK
Sbjct: 787 KLLGFIVSEEGIKVDPDKVRAIMEMSSPKVEKEIRGFLGRLNYISRFISHLTPTCESIFK 846

Query: 361 LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
           LL KNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP LG+  I
Sbjct: 847 LLCKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPALGRPLI 856

[Close]

BLAST of Cmc08g0222931 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 1.3e-171
Identity = 292/387 (75.45%), Postives = 340/387 (87.86%), Query Frame = 0


Query: 15   ISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSY 74
            +SSELLRM+EEE++ LGPH E  E +NLGSQ E KEVKIGT+++ ESRKKLI LL E++ 
Sbjct: 826  LSSELLRMLEEEEKTLGPHGESTEIVNLGSQAEVKEVKIGTNMSLESRKKLIELLHEFAD 885

Query: 75   IFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTV 134
            +FAWSYQD+P L TDIVVH++P+  EC  VRQKLRKM+PD+LIK+K+EV+KQI+AGFLTV
Sbjct: 886  VFAWSYQDMPSLDTDIVVHKLPINPECKPVRQKLRKMRPDMLIKVKDEVRKQIDAGFLTV 945

Query: 135  SKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMD 194
            S YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+LVDNTAG+STFSFMD
Sbjct: 946  SNYPEWVANIVPVPKKNGQVRMCVDYRDLNRASPKDNFPLPHIDVLVDNTAGFSTFSFMD 1005

Query: 195  GFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIE 254
            GFSGYN+IKMA EDREKTTFITLWGTFCYK M FGLKN GATY RAMVTLFHD+MHK+IE
Sbjct: 1006 GFSGYNRIKMAPEDREKTTFITLWGTFCYKVMSFGLKNAGATYQRAMVTLFHDLMHKEIE 1065

Query: 255  VYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKV 314
            VYVDDMIAKS+  E+HT  L+KLF+RLRK+QLKLNP+K TFG TSGKLLGF+V +EGIKV
Sbjct: 1066 VYVDDMIAKSRQGEEHTLVLRKLFERLRKFQLKLNPNKCTFGVTSGKLLGFVVGQEGIKV 1125

Query: 315  DPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDC 374
            DPDKV+A +EM+  KT KE+RG LGRLNYI+RFISHLT TC+PIFKLLRKNN G W EDC
Sbjct: 1126 DPDKVKAILEMSPPKTXKEVRGFLGRLNYIARFISHLTATCEPIFKLLRKNNDGIWGEDC 1185

Query: 375  EEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            + AF+KIKQY QSPP+L+PPT G+  I
Sbjct: 1186 QVAFDKIKQYXQSPPILVPPTSGRPLI 1212

[Close]

BLAST of Cmc08g0222931 vs. ExPASy TrEMBL
Match: A0A6J1D1K4 (uncharacterized protein LOC111016192 OS=Momordica charantia OX=3673 GN=LOC111016192 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 2.2e-171
Identity = 297/401 (74.06%), Postives = 348/401 (86.78%), Query Frame = 0


Query: 1   MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
           +ESD+E DDE     S ELLRM+ EE+++LGPH+EL E INLGSQ E+KEVKIGT+++SE
Sbjct: 348 IESDEEIDDE----FSXELLRMLAEEEKMLGPHEELTETINLGSQAEAKEVKIGTNMSSE 407

Query: 61  SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
           SRKKLI LL EY+ +FAWSYQD+P L TDIVVH++ +  E   VRQKLRKM+PD+LIKIK
Sbjct: 408 SRKKLIELLHEYADVFAWSYQDIPGLDTDIVVHKLSINPEFKPVRQKLRKMRPDMLIKIK 467

Query: 121 EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
           +EV+K+I+AGFLTVS YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+L
Sbjct: 468 DEVRKKIDAGFLTVSNYPEWVANIVXVPKKNGQVRMCVDYRDLNRASPKDNFPLPHIDVL 527

Query: 181 VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
           VDNT  +STFSFMDGF GYNQI+MA EDREKTTFITLWGTFCYK MPFGLKN GATY RA
Sbjct: 528 VDNTVMFSTFSFMDGFLGYNQIQMAPEDREKTTFITLWGTFCYKVMPFGLKNAGATYQRA 587

Query: 241 MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
           MV LFHD+MHKKIEVYVDDMIAKSK  E+HT+ L+KLFDRLRK++LKLNP+KY FGAT+G
Sbjct: 588 MVALFHDLMHKKIEVYVDDMIAKSKEGEEHTTILRKLFDRLRKFKLKLNPNKYIFGATTG 647

Query: 301 KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
           KLLGF+VS++GIKVDPDKV+A +EM    T+KE+RG LGRLNYI+RFISHLT TC+PIFK
Sbjct: 648 KLLGFVVSQKGIKVDPDKVKAILEMPPPWTQKEVRGFLGRLNYIARFISHLTVTCEPIFK 707

Query: 361 LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
           LLRKNN G W EDC+  F+KIK+YLQ PPVL+PPTLG+  I
Sbjct: 708 LLRKNNDGVWSEDCQAVFDKIKKYLQDPPVLVPPTLGRPLI 744

[Close]

BLAST of Cmc08g0222931 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.6e-169
Identity = 296/401 (73.82%), Postives = 348/401 (86.78%), Query Frame = 0


Query: 1    MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
            +ESD+E DDE     S+ELLRM+EEE+++LGPH+EL E +NLGSQ E+KE+KIGT ++SE
Sbjct: 1141 IESDEEIDDEP----SAELLRMLEEEEKMLGPHEELTETLNLGSQAEAKEIKIGTHMSSE 1200

Query: 61   SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
            SRKKLI LL EY+ +FAWSY D+  L TDIVVH++P+  E   +RQKLRKM+PD+LIKIK
Sbjct: 1201 SRKKLIELLHEYADVFAWSYXDMLGLDTDIVVHKLPINPEFKPMRQKLRKMRPDMLIKIK 1260

Query: 121  EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
             EV+KQI+AGFLTVS YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+L
Sbjct: 1261 NEVRKQIDAGFLTVSNYPEWVANIVPVPKKNGQVRMCVDYRDLNRASPKDNFPLPHIDVL 1320

Query: 181  VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
            VDNTAG+STFSFMDGFSGYNQIKMA EDREKTTFITLWGTFCYK M FGLKN GATY RA
Sbjct: 1321 VDNTAGFSTFSFMDGFSGYNQIKMAPEDREKTTFITLWGTFCYKVMSFGLKNAGATYQRA 1380

Query: 241  MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
            MVTLFHD+MHK+IEVYVDDMIAKSK  E+HT+ L+KLFDRLRK++LKLN +K  FGAT+G
Sbjct: 1381 MVTLFHDLMHKEIEVYVDDMIAKSKQGEEHTTILRKLFDRLRKFKLKLNSNKCIFGATTG 1440

Query: 301  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
            KLLGF+VS+EGIKVDPDKV+A +EM   +T+KE+RG LGRLNYI+RFISHLT TC+PIFK
Sbjct: 1441 KLLGFVVSQEGIKVDPDKVKAILEMPPPQTQKEVRGFLGRLNYIARFISHLTATCEPIFK 1500

Query: 361  LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            LLRKNN G   EDC+ AF+K+KQYLQ PPVL+PPT G+  I
Sbjct: 1501 LLRKNNDGVXSEDCQAAFDKVKQYLQDPPVLVPPTPGRLLI 1537

[Close]

BLAST of Cmc08g0222931 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.9e-167
Identity = 292/401 (72.82%), Postives = 347/401 (86.53%), Query Frame = 0


Query: 1    MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSE 60
            +ESDKE DDE     S+ELLRM+EEE+++LGPH+EL E +NLGSQ E+KE+KIGT ++SE
Sbjct: 1031 IESDKEIDDEP----SAELLRMLEEEEKMLGPHEELTETLNLGSQAEAKEIKIGTHMSSE 1090

Query: 61   SRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIK 120
            SRKKLI LL EY+ +FAWSYQD+P L TDIVVH++ +  +   VRQKLRKM+PD+LIKIK
Sbjct: 1091 SRKKLIELLHEYADVFAWSYQDMPGLDTDIVVHKLQINPKFKPVRQKLRKMRPDMLIKIK 1150

Query: 121  EEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDML 180
            +EV+KQI+AGFLT+S YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+L
Sbjct: 1151 DEVRKQIDAGFLTISNYPEWVANIVPVPKKNGQVRMCVDYRDLNRASPKDNFPLPHIDVL 1210

Query: 181  VDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRA 240
            VDNTAG+STFSFMDGFSGYNQIKMA EDREKTTFITLWGTF YK M FGLKN GATY RA
Sbjct: 1211 VDNTAGFSTFSFMDGFSGYNQIKMAPEDREKTTFITLWGTFYYKVMXFGLKNAGATYQRA 1270

Query: 241  MVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG 300
            MVTLFHD+MHK+IEVYVDDMIAKSK  E HT+ L+KLFDRLRK++LKLNP+K  FGAT+G
Sbjct: 1271 MVTLFHDLMHKEIEVYVDDMIAKSKQGEKHTTILRKLFDRLRKFKLKLNPNKCIFGATTG 1330

Query: 301  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFK 360
            KLLGF+VS+EGIKV+ DKV+A +EM   +T+K++RG LGRLNYI+RFISHLT TC+PIFK
Sbjct: 1331 KLLGFVVSQEGIKVNLDKVKAILEMPPPQTQKKVRGFLGRLNYIARFISHLTATCEPIFK 1390

Query: 361  LLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI 402
            LLRKNN G W E+C+ A +KIKQYL  PP+L+PPT G+  I
Sbjct: 1391 LLRKNNDGVWSENCQAALDKIKQYLTDPPILVPPTPGRPFI 1427

The following BLAST results are available for this feature:

BLAST of Cmc08g0222931 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739260.1	8.5e-202	88.53	LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus]	[more]
XP_031738551.1	9.4e-201	88.03	LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]	[more]
XP_031741698.1	9.4e-201	88.03	uncharacterized protein LOC116403895 [Cucumis sativus]	[more]
XP_031741309.1	9.4e-201	88.03	LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]	[more]
XP_031738857.1	9.4e-201	88.03	LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]	[more]

BLAST of Cmc08g0222931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.1e-42	34.49	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.9e-42	34.49	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	8.1e-38	30.14	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	3.4e-36	29.11	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	2.2e-35	32.55	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc08g0222931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VK41	1.1e-181	83.29	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1DM29	1.3e-171	75.45	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia...	[more]
A0A6J1D1K4	2.2e-171	74.06	uncharacterized protein LOC111016192 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1D099	1.6e-169	73.82	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1CNY7	1.9e-167	72.82	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]

BLAST of Cmc08g0222931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 172..307 e-value: 6.9E-63 score: 213.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 317..398 e-value: 1.5E-19 score: 71.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 92..232 e-value: 6.9E-63 score: 213.8
None	No IPR available	PANTHER	PTHR24559:SF341	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 60..386
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 60..386
None	No IPR available	CDD	cd01647	RT_LTR	coord: 130..307 e-value: 1.01601E-79 score: 241.345
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 147..306 e-value: 2.9E-21 score: 76.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 128..307 score: 10.843521
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 90..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0222931.1	Cmc08g0222931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity