Cmc08g0222881 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0222881
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 11947196 .. 11948565 (-)
RNA-Seq Expression	Cmc08g0222881
Synteny	Cmc08g0222881

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTGGTTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAATAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGTTGACATCTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGACTGAAGAAGGTATCTTTTCTTGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTTACCAATTCGCTCGATCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCATGCATAGCCAGCCCCTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAGCTTAAGTGGAAGCTAGTGACTGCACCAGTCTTGACAGTGCTCGATGGGTCGGGAAACTTCGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGTCTCCCGTCAGTTGAAGAGTCGTGAGCAGAACTACCCTACCCACGATTTAGAACTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGAAGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGACACCCTGAGTAGGAAGGTTGCACATTCAGCAGCACTGATCACCAAACAAGCCCCCTTACTCAAAGATTTTGAGAGAGCCGAGATTGTAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCCTGAGACAGAGGATTATTGTCGCTCAGTTAAATGATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCTTCTGATGATGGCCTTACGTTTGAGGGACGCTTGTGTGTGCCGGAAGACATTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCTTGGAAGTACGAAGATGTACAAGGACTTAAGGAGTATCTATTGGTGGAGGAACATGAAGAGAGAGGTGGCAGAATTTGTCAGTAGGTGTTTAGTGTACCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTGCAACCTTTGAGTGTGTCAGGATGGAAATGA

mRNA sequence

ATGTCTTTTGGTTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAATAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGTTGACATCTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAACAAAGATCGAAGCGGTTACCAATTCGCTCGATCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCATGCATAGCCAGCCCCTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAGCTTAAGTGGAAGCTAGTGACTGCACCAGTCTTGACAGTGCTCGATGGGTCGGGAAACTTCGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGTCTCCCGTCAGTTGAAGAGTCGTGAGCAGAACTACCCTACCCACGATTTAGAACTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGAAGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGACACCCTGAGTAGGAAGGTTGCACATTCAGCAGCACTGATCACCAAACAAGCCCCCTTACTCAAAGATTTTGAGAGAGCCGAGATTGTAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCCTGAGACAGAGGATTATTGTCGCTCAGTTAAATGATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCTTCTGATGATGGCCTTACGTTTGAGGGACGCTTGTGTGTGCCGGAAGACATTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCTTGGAAGTACGAAGATGTACAAGGACTTAAGGAGTATCTATTGGTGGAGGAACATGAAGAGAGAGGTGGCAGAATTTGTCAGTAGGTGTTTAGTGTACCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTGCAACCTTTGAGTGTGTCAGGATGGAAATGA

Coding sequence (CDS)

ATGTCTTTTGGTTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAATAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGTTGACATCTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGACTGTATGCCAAGTTCTCCAACAAAGATCGAAGCGGTTACCAATTCGCTCGATCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCATGCATAGCCAGCCCCTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAGCTTAAGTGGAAGCTAGTGACTGCACCAGTCTTGACAGTGCTCGATGGGTCGGGAAACTTCGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGTCTCCCGTCAGTTGAAGAGTCGTGAGCAGAACTACCCTACCCACGATTTAGAACTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGAAGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGACACCCTGAGTAGGAAGGTTGCACATTCAGCAGCACTGATCACCAAACAAGCCCCCTTACTCAAAGATTTTGAGAGAGCCGAGATTGTAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCCTGAGACAGAGGATTATTGTCGCTCAGTTAAATGATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCTTCTGATGATGGCCTTACGTTTGAGGGACGCTTGTGTGTGCCGGAAGACATTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCTTGGAAGTACGAAGATGTACAAGGACTTAAGGAGTATCTATTGGTGGAGGAACATGAAGAGAGAGGTGGCAGAATTTGTCAGTAGGTGTTTAGTGTACCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTGCAACCTTTGAGTGTGTCAGGATGGAAATGA

Protein sequence

MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANRLYAKFSNKDRSGYQFARSSTVSEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSDASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITKQAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK

Homology

[Close]

BLAST of Cmc08g0222881 vs. NCBI nr
Match: TYK27796.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 839.3 bits (2167), Expect = 1.4e-239
Identity = 425/431 (98.61%), Postives = 425/431 (98.61%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
           MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR
Sbjct: 86  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 145

Query: 61  LYAKFSNKDRSGYQFARSSTVSEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVW 120
           L      KDRSGYQFARSSTVSEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVW
Sbjct: 146 L------KDRSGYQFARSSTVSEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVW 205

Query: 121 SPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSDASKKGLGCVLMQQGKVVAYVSRQLK 180
           SPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSDASKKGLGCVLMQQGKVVAYVSRQLK
Sbjct: 206 SPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSDASKKGLGCVLMQQGKVVAYVSRQLK 265

Query: 181 SREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL 240
           SREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL
Sbjct: 266 SREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL 325

Query: 241 VKDYDCEILYHPGKANVVADTLSRKVAHSAALITKQAPLLKDFERAEIVVSVGEVTSQLA 300
           VKDYDCEILYHPGKANVVADTLSRKVAHSAALITKQAPLLKDFERAEIVVSVGEVTSQLA
Sbjct: 326 VKDYDCEILYHPGKANVVADTLSRKVAHSAALITKQAPLLKDFERAEIVVSVGEVTSQLA 385

Query: 301 QLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRLCVPEDIAVK 360
           QLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRLCVPEDIAVK
Sbjct: 386 QLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRLCVPEDIAVK 445

Query: 361 TELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAG 420
           TELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAG
Sbjct: 446 TELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAG 505

Query: 421 LLQPLSVSGWK 432
           LLQPLSVSGWK
Sbjct: 506 LLQPLSVSGWK 510

[Close]

BLAST of Cmc08g0222881 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 761.1 bits (1964), Expect = 5.0e-216
Identity = 391/456 (85.75%), Postives = 403/456 (88.38%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
            MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN+
Sbjct: 713  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 61   LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
            LYAKFS                          K  +   + R STVSEIRSFLGLAGYYR
Sbjct: 773  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 832

Query: 121  RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
            RFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 833  RFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 892

Query: 181  ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
            ASKK LGCVLMQQGKVVAY SRQLK+ EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+
Sbjct: 893  ASKKELGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 952

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITK
Sbjct: 953  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 1012

Query: 301  QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
            Q PLL+DFERAEI VSVGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGE
Sbjct: 1013 QTPLLRDFERAEITVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGE 1072

Query: 361  DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
            DFSISSDDGL FEGRLCVPED AVKTELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 1073 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 1132

Query: 421  REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
            REVA+FVSRCLV QQVKAPRQ PAGLLQPLSV GWK
Sbjct: 1133 REVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 1168

[Close]

BLAST of Cmc08g0222881 vs. NCBI nr
Match: KAA0045429.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 760.8 bits (1963), Expect = 6.5e-216
Identity = 390/456 (85.53%), Postives = 401/456 (87.94%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
           MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN+
Sbjct: 447 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 506

Query: 61  LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
           LYAKFS                          K  +   + R STVSEIRSFLG AGYYR
Sbjct: 507 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMTNWPRPSTVSEIRSFLGFAGYYR 566

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           RFVEDFSCIASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 567 RFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 626

Query: 181 ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+
Sbjct: 627 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 686

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITK
Sbjct: 687 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 746

Query: 301 QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
           Q PLL+DFERAEI VSVGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VET QGE
Sbjct: 747 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGE 806

Query: 361 DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
           DFSISSDDGL FEGRLCVPED AVKTELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 807 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 866

Query: 421 REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
           REVA+ VSRCLV QQVKAPRQ PAGLLQPLSV GWK
Sbjct: 867 REVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 902

[Close]

BLAST of Cmc08g0222881 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 759.6 bits (1960), Expect = 1.5e-215
Identity = 390/456 (85.53%), Postives = 403/456 (88.38%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
           +SFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN+
Sbjct: 251 ISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
           LYAKFS                          K  +   + R STVSEIRSFLGLAGYYR
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 370

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           RFVED S IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 371 RFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVPDGSGNFVIYSD 430

Query: 181 ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+
Sbjct: 431 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 490

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD+LSRKVAHSAALITK
Sbjct: 491 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITK 550

Query: 301 QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
           Q PLL+DFERAEI VSVGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGE
Sbjct: 551 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGE 610

Query: 361 DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
           DFSISSDDGL FEGRLCVPED AVKTELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 611 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 670

Query: 421 REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
           REVA+FVSRCLV QQVKAPRQ PAGLLQPLSV GWK
Sbjct: 671 REVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 706

[Close]

BLAST of Cmc08g0222881 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 759.6 bits (1960), Expect = 1.5e-215
Identity = 391/456 (85.75%), Postives = 402/456 (88.16%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
            MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN 
Sbjct: 720  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANN 779

Query: 61   LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
            LYAKFS                          K  +   + R STVSEI+SFLGLAGYYR
Sbjct: 780  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYR 839

Query: 121  RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
            RFVEDFS IASPLTQLTRKGTPFVWSPACESSFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 840  RFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 899

Query: 181  ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
            ASKKGLGCVLMQQGKVVAY SRQLK  EQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+
Sbjct: 900  ASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLYGEKIQIY 959

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSA LITK
Sbjct: 960  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAVLITK 1019

Query: 301  QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
            Q PLL+DFERAEI VSVGEVTSQLAQLSVQPTLRQ+II AQLNDPYLVEKRR+VETGQGE
Sbjct: 1020 QTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 1079

Query: 361  DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
            DFSISSDDGL FEGRLCVPED AV+TELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 1080 DFSISSDDGLMFEGRLCVPEDSAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 1139

Query: 421  REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
            REVA+FVSRCLV QQVKAPRQ P GLLQPLSVSGWK
Sbjct: 1140 REVADFVSRCLVCQQVKAPRQCPTGLLQPLSVSGWK 1175

[Close]

BLAST of Cmc08g0222881 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.7e-44
Identity = 132/468 (28.21%), Postives = 223/468 (47.65%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLR--- 60
           M +G++ APA F   +N +  +  +S V+ ++ DILI+SK+E+EH +H+  VL+ L+   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  --ANRLYAKF--SNKDRSGY------------------QFARSSTVSEIRSFLGLAGYYR 120
              N+   +F  S     GY                  Q+ +     E+R FLG   Y R
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           +F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL   D S   ++ +D
Sbjct: 654 KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181 ASKKGLGCVLMQQGK-----VVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYG- 240
           AS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714 ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241 -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKV 300
            E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Sbjct: 774 IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301 AHSAALITKQAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV--- 360
                ++ +  P+ KD E   I        + + Q+S+    + +++    ND  L+   
Sbjct: 834 -----IVDETEPIPKDSEDNSI--------NFVNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361 --EKRRLVETGQGED-FSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTK 420
             E +R+ E  Q +D   I+S D      ++ +P D  +   ++ + H     +H G   
Sbjct: 894 NNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 953

Query: 421 MYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVS 429
           +   +   + W+ +++++ E+V  C   Q  K+   +P G LQP+  S
Sbjct: 954 LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

[Close]

BLAST of Cmc08g0222881 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.7e-44
Identity = 132/468 (28.21%), Postives = 223/468 (47.65%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLR--- 60
           M +G++ APA F   +N +  +  +S V+ ++ DILI+SK+E+EH +H+  VL+ L+   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  --ANRLYAKF--SNKDRSGY------------------QFARSSTVSEIRSFLGLAGYYR 120
              N+   +F  S     GY                  Q+ +     E+R FLG   Y R
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           +F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL   D S   ++ +D
Sbjct: 654 KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181 ASKKGLGCVLMQQGK-----VVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYG- 240
           AS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714 ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241 -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKV 300
            E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Sbjct: 774 IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301 AHSAALITKQAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV--- 360
                ++ +  P+ KD E   I        + + Q+S+    + +++    ND  L+   
Sbjct: 834 -----IVDETEPIPKDSEDNSI--------NFVNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361 --EKRRLVETGQGED-FSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTK 420
             E +R+ E  Q +D   I+S D      ++ +P D  +   ++ + H     +H G   
Sbjct: 894 NNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 953

Query: 421 MYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVS 429
           +   +   + W+ +++++ E+V  C   Q  K+   +P G LQP+  S
Sbjct: 954 LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

[Close]

BLAST of Cmc08g0222881 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.7e-44
Identity = 132/468 (28.21%), Postives = 223/468 (47.65%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLR--- 60
           M +G++ APA F   +N +  +  +S V+ ++ DILI+SK+E+EH +H+  VL+ L+   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  --ANRLYAKF--SNKDRSGY------------------QFARSSTVSEIRSFLGLAGYYR 120
              N+   +F  S     GY                  Q+ +     E+R FLG   Y R
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           +F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL   D S   ++ +D
Sbjct: 654 KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181 ASKKGLGCVLMQQGK-----VVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYG- 240
           AS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714 ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241 -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKV 300
            E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Sbjct: 774 IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301 AHSAALITKQAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV--- 360
                ++ +  P+ KD E   I        + + Q+S+    + +++    ND  L+   
Sbjct: 834 -----IVDETEPIPKDSEDNSI--------NFVNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361 --EKRRLVETGQGED-FSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTK 420
             E +R+ E  Q +D   I+S D      ++ +P D  +   ++ + H     +H G   
Sbjct: 894 NNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 953

Query: 421 MYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVS 429
           +   +   + W+ +++++ E+V  C   Q  K+   +P G LQP+  S
Sbjct: 954 LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

[Close]

BLAST of Cmc08g0222881 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.7e-44
Identity = 132/468 (28.21%), Postives = 223/468 (47.65%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLR--- 60
           M +G++ APA F   +N +  +  +S V+ ++ DILI+SK+E+EH +H+  VL+ L+   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  --ANRLYAKF--SNKDRSGY------------------QFARSSTVSEIRSFLGLAGYYR 120
              N+   +F  S     GY                  Q+ +     E+R FLG   Y R
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           +F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL   D S   ++ +D
Sbjct: 654 KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181 ASKKGLGCVLMQQGK-----VVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYG- 240
           AS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714 ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241 -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKV 300
            E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Sbjct: 774 IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301 AHSAALITKQAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV--- 360
                ++ +  P+ KD E   I        + + Q+S+    + +++    ND  L+   
Sbjct: 834 -----IVDETEPIPKDSEDNSI--------NFVNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361 --EKRRLVETGQGED-FSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTK 420
             E +R+ E  Q +D   I+S D      ++ +P D  +   ++ + H     +H G   
Sbjct: 894 NNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 953

Query: 421 MYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVS 429
           +   +   + W+ +++++ E+V  C   Q  K+   +P G LQP+  S
Sbjct: 954 LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

[Close]

BLAST of Cmc08g0222881 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.7e-44
Identity = 132/468 (28.21%), Postives = 223/468 (47.65%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLR--- 60
           M +G++ APA F   +N +  +  +S V+ ++ DILI+SK+E+EH +H+  VL+ L+   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  --ANRLYAKF--SNKDRSGY------------------QFARSSTVSEIRSFLGLAGYYR 120
              N+   +F  S     GY                  Q+ +     E+R FLG   Y R
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           +F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL   D S   ++ +D
Sbjct: 654 KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181 ASKKGLGCVLMQQGK-----VVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYG- 240
           AS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714 ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241 -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKV 300
            E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Sbjct: 774 IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301 AHSAALITKQAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV--- 360
                ++ +  P+ KD E   I        + + Q+S+    + +++    ND  L+   
Sbjct: 834 -----IVDETEPIPKDSEDNSI--------NFVNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361 --EKRRLVETGQGED-FSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTK 420
             E +R+ E  Q +D   I+S D      ++ +P D  +   ++ + H     +H G   
Sbjct: 894 NNEDKRVEENIQLKDGLLINSKD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 953

Query: 421 MYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVS 429
           +   +   + W+ +++++ E+V  C   Q  K+   +P G LQP+  S
Sbjct: 954 LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

[Close]

BLAST of Cmc08g0222881 vs. ExPASy TrEMBL
Match: A0A5D3DVL8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00170 PE=4 SV=1)

HSP 1 Score: 839.3 bits (2167), Expect = 7.0e-240
Identity = 425/431 (98.61%), Postives = 425/431 (98.61%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
           MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR
Sbjct: 86  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 145

Query: 61  LYAKFSNKDRSGYQFARSSTVSEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVW 120
           L      KDRSGYQFARSSTVSEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVW
Sbjct: 146 L------KDRSGYQFARSSTVSEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVW 205

Query: 121 SPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSDASKKGLGCVLMQQGKVVAYVSRQLK 180
           SPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSDASKKGLGCVLMQQGKVVAYVSRQLK
Sbjct: 206 SPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSDASKKGLGCVLMQQGKVVAYVSRQLK 265

Query: 181 SREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL 240
           SREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL
Sbjct: 266 SREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL 325

Query: 241 VKDYDCEILYHPGKANVVADTLSRKVAHSAALITKQAPLLKDFERAEIVVSVGEVTSQLA 300
           VKDYDCEILYHPGKANVVADTLSRKVAHSAALITKQAPLLKDFERAEIVVSVGEVTSQLA
Sbjct: 326 VKDYDCEILYHPGKANVVADTLSRKVAHSAALITKQAPLLKDFERAEIVVSVGEVTSQLA 385

Query: 301 QLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRLCVPEDIAVK 360
           QLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRLCVPEDIAVK
Sbjct: 386 QLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRLCVPEDIAVK 445

Query: 361 TELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAG 420
           TELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAG
Sbjct: 446 TELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMKREVAEFVSRCLVYQQVKAPRQRPAG 505

Query: 421 LLQPLSVSGWK 432
           LLQPLSVSGWK
Sbjct: 506 LLQPLSVSGWK 510

[Close]

BLAST of Cmc08g0222881 vs. ExPASy TrEMBL
Match: A0A5A7V646 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00030 PE=4 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 2.4e-216
Identity = 391/456 (85.75%), Postives = 403/456 (88.38%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
            MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN+
Sbjct: 713  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 61   LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
            LYAKFS                          K  +   + R STVSEIRSFLGLAGYYR
Sbjct: 773  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 832

Query: 121  RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
            RFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 833  RFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 892

Query: 181  ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
            ASKK LGCVLMQQGKVVAY SRQLK+ EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+
Sbjct: 893  ASKKELGCVLMQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 952

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITK
Sbjct: 953  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 1012

Query: 301  QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
            Q PLL+DFERAEI VSVGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGE
Sbjct: 1013 QTPLLRDFERAEITVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGE 1072

Query: 361  DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
            DFSISSDDGL FEGRLCVPED AVKTELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 1073 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 1132

Query: 421  REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
            REVA+FVSRCLV QQVKAPRQ PAGLLQPLSV GWK
Sbjct: 1133 REVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 1168

[Close]

BLAST of Cmc08g0222881 vs. ExPASy TrEMBL
Match: A0A5A7TW21 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold294G00260 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.2e-216
Identity = 390/456 (85.53%), Postives = 401/456 (87.94%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
           MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN+
Sbjct: 447 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 506

Query: 61  LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
           LYAKFS                          K  +   + R STVSEIRSFLG AGYYR
Sbjct: 507 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAMTNWPRPSTVSEIRSFLGFAGYYR 566

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           RFVEDFSCIASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 567 RFVEDFSCIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 626

Query: 181 ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+
Sbjct: 627 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 686

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITK
Sbjct: 687 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 746

Query: 301 QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
           Q PLL+DFERAEI VSVGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VET QGE
Sbjct: 747 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGE 806

Query: 361 DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
           DFSISSDDGL FEGRLCVPED AVKTELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 807 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 866

Query: 421 REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
           REVA+ VSRCLV QQVKAPRQ PAGLLQPLSV GWK
Sbjct: 867 REVADIVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 902

[Close]

BLAST of Cmc08g0222881 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 7.1e-216
Identity = 391/456 (85.75%), Postives = 402/456 (88.16%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
            MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN 
Sbjct: 720  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANN 779

Query: 61   LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
            LYAKFS                          K  +   + R STVSEI+SFLGLAGYYR
Sbjct: 780  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYR 839

Query: 121  RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
            RFVEDFS IASPLTQLTRKGTPFVWSPACESSFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 840  RFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 899

Query: 181  ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
            ASKKGLGCVLMQQGKVVAY SRQLK  EQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+
Sbjct: 900  ASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLYGEKIQIY 959

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSA LITK
Sbjct: 960  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAVLITK 1019

Query: 301  QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
            Q PLL+DFERAEI VSVGEVTSQLAQLSVQPTLRQ+II AQLNDPYLVEKRR+VETGQGE
Sbjct: 1020 QTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 1079

Query: 361  DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
            DFSISSDDGL FEGRLCVPED AV+TELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 1080 DFSISSDDGLMFEGRLCVPEDSAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 1139

Query: 421  REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
            REVA+FVSRCLV QQVKAPRQ P GLLQPLSVSGWK
Sbjct: 1140 REVADFVSRCLVCQQVKAPRQCPTGLLQPLSVSGWK 1175

[Close]

BLAST of Cmc08g0222881 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 7.1e-216
Identity = 390/456 (85.53%), Postives = 403/456 (88.38%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIVDILIYSKTEAEHEEHLHQVLETLRANR 60
           +SFGLTNAPAVFMDLMNRVFKDFLDSFVIVFI DILIYSKTEAEHEEHLHQVLETLRAN+
Sbjct: 251 ISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSN-------------------------KDRSGYQFARSSTVSEIRSFLGLAGYYR 120
           LYAKFS                          K  +   + R STVSEIRSFLGLAGYYR
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 370

Query: 121 RFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVLTVLDGSGNFVIYSD 180
           RFVED S IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLTV DGSGNFVIYSD
Sbjct: 371 RFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVPDGSGNFVIYSD 430

Query: 181 ASKKGLGCVLMQQGKVVAYVSRQLKSREQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+
Sbjct: 431 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 490

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADTLSRKVAHSAALITK 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD+LSRKVAHSAALITK
Sbjct: 491 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITK 550

Query: 301 QAPLLKDFERAEIVVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGE 360
           Q PLL+DFERAEI VSVGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGE
Sbjct: 551 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGE 610

Query: 361 DFSISSDDGLTFEGRLCVPEDIAVKTELLTEAHSSPFTMHLGSTKMYKDLRSIYWWRNMK 420
           DFSISSDDGL FEGRLCVPED AVKTELLTEAHSSPFTMH GSTKMY+DLRS+YWWR MK
Sbjct: 611 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 670

Query: 421 REVAEFVSRCLVYQQVKAPRQRPAGLLQPLSVSGWK 432
           REVA+FVSRCLV QQVKAPRQ PAGLLQPLSV GWK
Sbjct: 671 REVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 706

[Close]

BLAST of Cmc08g0222881 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 8.8e-09
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 82  SEIRSFLGLAGYYRRFVEDFSCIASPLTQLTRKGTPFVWSPACESSFQELKWKLVTAPVL 141
           +E+R FLGL GYYRRFV+++  I  PLT+L +K +   W+     +F+ LK  + T PVL
Sbjct: 64  TELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVL 123

Query: 142 TVLD 146
            + D
Sbjct: 124 ALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc08g0222881 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK27796.1	1.4e-239	98.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063098.1	5.0e-216	85.75	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045429.1	6.5e-216	85.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	1.5e-215	85.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040547.1	1.5e-215	85.75	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0222881 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	3.7e-44	28.21	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.7e-44	28.21	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.7e-44	28.21	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.7e-44	28.21	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	3.7e-44	28.21	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0222881 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DVL8	7.0e-240	98.61	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00170 PE...	[more]
A0A5A7V646	2.4e-216	85.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TW21	3.2e-216	85.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29...	[more]
A0A5A7TG62	7.1e-216	85.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7TVN9	7.1e-216	85.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]

BLAST of Cmc08g0222881 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.8e-09	43.75	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 359..413 e-value: 6.9E-15 score: 54.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 77..156 e-value: 4.1E-24 score: 86.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..76 e-value: 6.3E-20 score: 73.3
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..62 e-value: 2.6E-7 score: 30.4
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 148..244 e-value: 2.9E-34 score: 117.5
None	No IPR available	GENE3D	1.10.340.70		coord: 320..412 e-value: 5.6E-16 score: 60.5
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 66..387
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 66..387
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 151..266 e-value: 3.90268E-59 score: 187.315
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..89 e-value: 5.85471E-25 score: 98.8217
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0222881.1	Cmc08g0222881.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding