Cmc08g0222651 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0222651
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUlp1-like peptidase
LocationCMiso1.1chr08: 11675600 .. 11677036 (-)
RNA-Seq ExpressionCmc08g0222651
SyntenyCmc08g0222651
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATAACCCTCTGCTGTCGCTTCCTCATCAGTTGGAGTTAAGATTGGTTGGAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGAATTTTTCATCAAGGATAAGAGGATTTTTCAACCTCCATCTGATTAACCTTTGTAAGCCAATAAAATTAAATTAATATTTTATTAATTTAATTTTGAATATATTTGAGGTTTCTTTAAAGATTCAATTGGCTAAATTTTCAAGTTTTAAATCTTGGATTTTTTCCAATCAAGGTTGAATTGGTTTCAACCCCTTTTGTTTGAGAAGTTAATTAATTTGGGAGAATTTTTGGATGTTAGCCAATTGCTAATTTCATTAATTAAGATACTAAGTTTTCCTTTTATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTGAAATCTCCAGGTAAGAGATTCTCCTACTAGACCTTCGAACTGAATTTAAGAGACCGCATGTAATTATGATTATGCATTGATGGTAGCTAAGATGCATAATGTGATGCTATAGATGATGATTGATATTGTGTTTATGATGATTGATATTGAAATTGATGATGATGACTGATACTATGATTGACGATGATGACTGGTATGTTTATGATGTTTATGATACATGATATATTAATCACATGAATAAGGACGTTATGATTAATATTCATGTCATGTTATGATGTTTATAATGATGTTACATGCTTTGGAGTATGGTGTGTTTGTTAACTTTGTCTGTTAAGCTTTTTACCCCACCTGTATTGTGGTCCTATCTATGGGGTCACTCGCACGACTAGGGGTGTTCCCACGGGATCACTCGCACGATTTAGGGGTGTACCTACGGATCACATGCACGGTTAGGGGACAGTTATATTGTGTATACGAGGTCACTCGCACGACTAGGGGTGTTCCGACGGGATCACTCGCACGATTAAGGGTGTACCTACGTATTACATATATGTTTATGGAGTGTGTACGAGGTCACTTGCACGACTAGGAGTGTTCCGACGGGACCACTCGCACGATTAGGGGTGTACCTACGTATACATATATGTTTATGGAGTGTGTACCTGCGATCATTCGCACGACTAGAGGTGTTCCTTCGGGATCACTCGCACGATTTAGGGGTGTTCGTAAGGTCTCACTCACTCAGGTGTGCTCCATTGGATACACAACGTTATGATTATGTTTCTAACGGAAAGTTAACAGATTACCTAGCGGGACTAGTAGTGGGTCCCTTACTGAGTATATTTATATAATCACTCTTTCCTATGTTTAATATTTCAGGTTAAGGTAAAGAACTTAAGAAGCTGGCGAGCGATAGCGAGGGATCCGTGGCATGCCATATGGGGACACAGTTCAGCTTCCGCACTTATTTATATGTCTTTCAGTATTTTTAAATTTTAA

mRNA sequence

GATAACCCTCTGCTGTCGCTTCCTCATCAGTTGGAGTTAAGATTGGTTGGAGTTAAGATTGGTCTCTTTGGAAGCTTGAGGATTTAAAGTGATGAATTTTTCATCAAGGATAAGAGGATTTTTCAACCTCCATCTGATTAACCTTTGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTGAAATCTCCAGATGATGATTGATATTGTTAAGGTAAAGAACTTAAGAAGCTGGCGAGCGATAGCGAGGGATCCGTGGCATGCCATATGGGGACACAGTTCAGCTTCCGCACTTATTTATATGTCTTTCAGTATTTTTAAATTTTAA

Coding sequence (CDS)

ATGATTGATATTGTTAAGGTAAAGAACTTAAGAAGCTGGCGAGCGATAGCGAGGGATCCGTGGCATGCCATATGGGGACACAGTTCAGCTTCCGCACTTATTTATATGTCTTTCAGTATTTTTAAATTTTAA

Protein sequence

MIDIVKVKNLRSWRAIARDPWHAIWGHSSASALIYMSFSIFKF
Homology
[Close]
BLAST of Cmc08g0222651 vs. NCBI nr
Match: TYK16459.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 5   VKVKNLRSWRAIARDPWHAIWGHSSASALIYMSFSIFK 43
           VKVKNLRSWRAIARDPWHAIWGHSSASALIY+  +I +
Sbjct: 96  VKVKNLRSWRAIARDPWHAIWGHSSASALIYILKTILQ 133

[Close]
BLAST of Cmc08g0222651 vs. NCBI nr
Match: TYK15856.1 (hypothetical protein E5676_scaffold637G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 6  KVKNLRSWRAIARDPWHAIWGHSSASALIYMS 38
          KVKNLRSWRAIARDPWHAIWGHSSASALIY+S
Sbjct: 34 KVKNLRSWRAIARDPWHAIWGHSSASALIYIS 65

[Close]
BLAST of Cmc08g0222651 vs. NCBI nr
Match: KAA0054363.1 (hypothetical protein E6C27_scaffold24G00930 [Cucumis melo var. makuwa] >TYK12401.1 hypothetical protein E5676_scaffold302G001850 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 5  VKVKNLRSWRAIARDPWHAIWGHSSASALIYMSFSIF 42
          VKVKNLRSWRAIARDPWHAIWGH   ++  Y   S F
Sbjct: 33 VKVKNLRSWRAIARDPWHAIWGHKLPNSSFYGESSKF 69

[Close]
BLAST of Cmc08g0222651 vs. ExPASy TrEMBL
Match: A0A5D3D1W4 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002580 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 5   VKVKNLRSWRAIARDPWHAIWGHSSASALIYMSFSIFK 43
           VKVKNLRSWRAIARDPWHAIWGHSSASALIY+  +I +
Sbjct: 96  VKVKNLRSWRAIARDPWHAIWGHSSASALIYILKTILQ 133

[Close]
BLAST of Cmc08g0222651 vs. ExPASy TrEMBL
Match: A0A5D3CZH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00320 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 6  KVKNLRSWRAIARDPWHAIWGHSSASALIYMS 38
          KVKNLRSWRAIARDPWHAIWGHSSASALIY+S
Sbjct: 34 KVKNLRSWRAIARDPWHAIWGHSSASALIYIS 65

[Close]
BLAST of Cmc08g0222651 vs. ExPASy TrEMBL
Match: A0A5A7UEC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001850 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-06
Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 5  VKVKNLRSWRAIARDPWHAIWGHSSASALIYMSFSIF 42
          VKVKNLRSWRAIARDPWHAIWGH   ++  Y   S F
Sbjct: 33 VKVKNLRSWRAIARDPWHAIWGHKLPNSSFYGESSKF 69

The following BLAST results are available for this feature:
BLAST of Cmc08g0222651 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK16459.13.1e-0984.21Ulp1-like peptidase [Cucumis melo var. makuwa][more]
TYK15856.13.1e-0996.88hypothetical protein E5676_scaffold637G00320 [Cucumis melo var. makuwa][more]
KAA0054363.11.2e-0570.27hypothetical protein E6C27_scaffold24G00930 [Cucumis melo var. makuwa] >TYK12401... [more]
BLAST of Cmc08g0222651 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0222651 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D1W41.5e-0984.21Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0... [more]
A0A5D3CZH91.5e-0996.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UEC85.9e-0670.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc08g0222651 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0222651.1Cmc08g0222651.1mRNA