Cmc08g0222431 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0222431
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionauxin-regulated gene involved in organ size
LocationCMiso1.1chr08: 11200704 .. 11201387 (+)
RNA-Seq ExpressionCmc08g0222431
SyntenyCmc08g0222431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTCAACCGGTTTCCCCTTTCCCCTTTCCCTCTTTTTCCCATTTATTACCTCCCTCATCTCTCTAGTCCTTAGCCCCACCCCCGCCCTCTCTTTCTCTCCCTTGACCGTAACATCAAAACACTACGTCCCTTCATTCTCCGGTCATTGCCGGCCGACAAAAATCAATTCTTTTCTTGTGGGTGTTTTGTTAGAGATAAAAACTCCACGACTTTACTCCGATATGCACGGGAAGAAAACCCTATTGGGTTGTGTCCAAATTTTGCTTTTGGCGGCGACGGGCGGGGGCGGTGGAGTTTGATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTCTGGCGGTGTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCTCCACCGGTATTGCTGCTGTTTGTTCCGGTCTTGATTATGTCGTTGCTTTTGTTCTTAGCTTTGTCGCCATCGGAGGCCCCAGCGGAGGGGCACCGTGGGACTGACTGCGACGGCGGGTTCAACTCGGCTTGATTTTTTTTTTTTTGTTGATTAGAAAATATATATAGTGGGAGGATGATGAAATTGGATGTTGGATTTTCAATATTTGGTTCTTGATTTGTTCTTCTTTGTTCAATGTATAATGAATTTTTTTTAGTGTAGTTGAATGTTTTTTTCCGTTGGGACG

mRNA sequence

GGTTCAACCGGTTTCCCCTTTCCCCTTTCCCTCTTTTTCCCATTTATTACCTCCCTCATCTCTCTAGTCCTTAGCCCCACCCCCGCCCTCTCTTTCTCTCCCTTGACCGTAACATCAAAACACTACGTCCCTTCATTCTCCGGTCATTGCCGGCCGACAAAAATCAATTCTTTTCTTGTGGGTGTTTTGTTAGAGATAAAAACTCCACGACTTTACTCCGATATGCACGGGAAGAAAACCCTATTGGGTTGTGTCCAAATTTTGCTTTTGGCGGCGACGGGCGGGGGCGGTGGAGTTTGATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTCTGGCGGTGTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCTCCACCGGTATTGCTGCTGTTTGTTCCGGTCTTGATTATGTCGTTGCTTTTGTTCTTAGCTTTGTCGCCATCGGAGGCCCCAGCGGAGGGGCACCGTGGGACTGACTGCGACGGCGGGTTCAACTCGGCTTGATTTTTTTTTTTTTGTTGATTAGAAAATATATATAGTGGGAGGATGATGAAATTGGATGTTGGATTTTCAATATTTGGTTCTTGATTTGTTCTTCTTTGTTCAATGTATAATGAATTTTTTTTAGTGTAGTTGAATGTTTTTTTCCGTTGGGACG

Coding sequence (CDS)

ATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTCTGGCGGTGTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCTCCACCGGTATTGCTGCTGTTTGTTCCGGTCTTGATTATGTCGTTGCTTTTGTTCTTAGCTTTGTCGCCATCGGAGGCCCCAGCGGAGGGGCACCGTGGGACTGACTGCGACGGCGGGTTCAACTCGGCTTGA

Protein sequence

MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGGFNSA
Homology
BLAST of Cmc08g0222431 vs. NCBI nr
Match: TYK04223.1 (hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 114.4 bits (285), Expect = 4.3e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query: 13 MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 72
          MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 60

Query: 73 FNSA 77
          FNSA
Sbjct: 61 FNSA 64

BLAST of Cmc08g0222431 vs. NCBI nr
Match: KAA0025988.1 (hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0

Query: 13 MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 72
          MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTD DGG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDSDGG 60

Query: 73 FNSA 77
          +NSA
Sbjct: 61 YNSA 64

BLAST of Cmc08g0222431 vs. NCBI nr
Match: KAG6603314.1 (hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 64/77 (83.12%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 1  MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 60
          MVR FFSLRSVAMLIV+A SLLILPLVLPPLPPPPVLLLFVPVLIM  LLFLALSPSE P
Sbjct: 1  MVRAFFSLRSVAMLIVVAASLLILPLVLPPLPPPPVLLLFVPVLIMFFLLFLALSPSEVP 60

Query: 61 AEGHR-GTDCDGGFNSA 77
          AE HR G D  GG +SA
Sbjct: 61 AEEHRVGADGGGGHDSA 77

BLAST of Cmc08g0222431 vs. NCBI nr
Match: KAG2683596.1 (hypothetical protein I3760_10G039000 [Carya illinoinensis] >KAG6690947.1 hypothetical protein I3842_10G039100 [Carya illinoinensis] >KAG7958838.1 hypothetical protein I3843_10G039300 [Carya illinoinensis])

HSP 1 Score: 72.4 bits (176), Expect = 1.9e-09
Identity = 41/57 (71.93%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 4  GFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 61
          G+FS RS+ ++IVLAVSL+++PL+LPPLPPPP+LLLFVPVLIMSLL+ LALS S  P
Sbjct: 3  GYFSARSIVVMIVLAVSLVVVPLLLPPLPPPPLLLLFVPVLIMSLLVVLALSSSHVP 59

BLAST of Cmc08g0222431 vs. NCBI nr
Match: KAG2687345.1 (hypothetical protein I3760_09G047200 [Carya illinoinensis] >KAG6694413.1 hypothetical protein I3842_09G047400 [Carya illinoinensis] >KAG7962070.1 hypothetical protein I3843_09G047700 [Carya illinoinensis])

HSP 1 Score: 70.1 bits (170), Expect = 9.4e-09
Identity = 39/60 (65.00%), Postives = 52/60 (86.67%), Query Frame = 0

Query: 1  MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 60
          M R + S+ ++ +++VL VSL++LPLV+PPLPPPP+LLLFVPVLIMSLL+ LALSPS+ P
Sbjct: 1  MFRYYMSVGTIVVMVVLTVSLMVLPLVVPPLPPPPLLLLFVPVLIMSLLVVLALSPSQTP 60

BLAST of Cmc08g0222431 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-07
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEA 60
           +FSL S+ +L+ L  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS +
Sbjct: 71  YFSLESLVILVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLIILAFMPSSS 125

BLAST of Cmc08g0222431 vs. ExPASy Swiss-Prot
Match: Q8RWS1 (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-07
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 9  RSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA 62
          RSVA+L+ L++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 28 RSVALLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

BLAST of Cmc08g0222431 vs. ExPASy Swiss-Prot
Match: Q7X6L2 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica OX=39947 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.1e-07
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGH 64
           +FS+ S+ +L+ +  SL+ILPLVLPPLPPPP +L+ VPV ++ LLL LA  P+   +   
Sbjct: 99  YFSVESLLLLVCVTASLVILPLVLPPLPPPPSMLMLVPVAMLVLLLALAFMPTTTSSSSS 158

Query: 65  RGTDCDGGFNSA 77
            G    GG N A
Sbjct: 159 AGGGGGGGRNGA 170

BLAST of Cmc08g0222431 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.1e-07
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Sbjct: 64  YFSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

BLAST of Cmc08g0222431 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.1e-07
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Sbjct: 70  YFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

BLAST of Cmc08g0222431 vs. ExPASy TrEMBL
Match: A0A5D3BWW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00300 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query: 13 MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 72
          MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 60

Query: 73 FNSA 77
          FNSA
Sbjct: 61 FNSA 64

BLAST of Cmc08g0222431 vs. ExPASy TrEMBL
Match: A0A5A7SII5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003090 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.8e-21
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0

Query: 13 MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDCDGG 72
          MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTD DGG
Sbjct: 1  MLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDSDGG 60

Query: 73 FNSA 77
          +NSA
Sbjct: 61 YNSA 64

BLAST of Cmc08g0222431 vs. ExPASy TrEMBL
Match: A0A0A0L0Y7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432970 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-20
Identity = 66/76 (86.84%), Postives = 67/76 (88.16%), Query Frame = 0

Query: 1  MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 60
          MVRGFFSLRSVAMLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSE P
Sbjct: 1  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60

Query: 61 AEGHRGTDCDGGFNSA 77
          AE H  TD     NSA
Sbjct: 61 AEEHHETDGGDEDNSA 76

BLAST of Cmc08g0222431 vs. ExPASy TrEMBL
Match: A0A5B7AL58 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 38/60 (63.33%), Postives = 53/60 (88.33%), Query Frame = 0

Query: 1   MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 60
           M+  FFSLR+V +++VL VSLL+LP+VLPPLPPPP++LLF+P+LIM++L+ LA SPS+ P
Sbjct: 89  MLVRFFSLRAVVIMVVLTVSLLVLPVVLPPLPPPPLMLLFIPILIMAVLILLAFSPSQLP 148

BLAST of Cmc08g0222431 vs. ExPASy TrEMBL
Match: A0A2K1XAA4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G037200 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-09
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 5  FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEA 60
          FFSLRSV  ++VL VSLL+LPLVLPPL PPP+L LFVPV IMSLLLFLALS S A
Sbjct: 4  FFSLRSVVTMVVLTVSLLVLPLVLPPLSPPPLLFLFVPVFIMSLLLFLALSSSTA 58

BLAST of Cmc08g0222431 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-08
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 9  RSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA 62
          RSVA+L+ L++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 28 RSVALLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

BLAST of Cmc08g0222431 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like )

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-08
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Sbjct: 70  YFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

BLAST of Cmc08g0222431 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size )

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-08
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Sbjct: 64  YFSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK04223.14.3e-22100.00hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa][more]
KAA0025988.11.4e-2096.88hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa][more]
KAG6603314.11.0e-1883.12hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG2683596.11.9e-0971.93hypothetical protein I3760_10G039000 [Carya illinoinensis] >KAG6690947.1 hypothe... [more]
KAG2687345.19.4e-0965.00hypothetical protein I3760_09G047200 [Carya illinoinensis] >KAG6694413.1 hypothe... [more]
Match NameE-valueIdentityDescription
C7SFP62.4e-0761.82Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. peki... [more]
Q8RWS12.4e-0762.26Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1[more]
Q7X6L23.1e-0747.22Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japon... [more]
Q6NMD69.1e-0764.15Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3... [more]
Q8RXL79.1e-0760.38ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3BWW32.1e-22100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SII56.8e-2196.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L0Y72.0e-2086.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432970 PE=4 SV=1[more]
A0A5B7AL581.6e-0963.33Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276... [more]
A0A2K1XAA44.5e-0978.18Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G037200 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT2G41230.11.7e-0862.26unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bact... [more]
AT2G44080.16.5e-0860.38ARGOS-like [more]
AT3G59900.16.5e-0864.15auxin-regulated gene involved in organ size [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38928ARGOS7coord: 2..63
NoneNo IPR availablePANTHERPTHR38928:SF8ARGOS7coord: 2..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0222431.1Cmc08g0222431.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046622 positive regulation of organ growth
biological_process GO:0009725 response to hormone
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus