Cmc08g0222341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0222341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 10959013 .. 10959912 (-)
RNA-Seq Expression	Cmc08g0222341
Synteny	Cmc08g0222341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTCTATTTGGATTACCTCGTACATCTAGTGGACATGATGGTATATGGGTAATAGTAGTTAGACTCACGAAGACGGTACGATTTATATCGATTAAAGCGACATCTACGTTAGACCAGTTAGCTAGATCATATGTTGATAAGATTATTAGTCAGCATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCATAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGACGGTCAGTCCGAGAGGACAATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAATCTAGTATCGGTATGGCACCATATGAGGCCTTATACGGGAGACCATGCAAAACTCTTGTGTGTTGGAATGAAGTGGGAGAGCGAAAGTTAGTAGGTCCTGAGTTGGTTCAGACTACGACAAACAATATTAAGTTAATTAGAGAAAACCTGAAGATAGCCCAAGATCGGCAGAGAAGTTATGCAAATAAGCGACGAAGAAACTTAGAATTCCAAGCTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGCTGTTTTTCATTTCAGAAGAAAAGGTAAGTTCAGTCCTAGATATATTGGGTCATATCAGATAATGAAACGAGTGGGACCAGCAGCATATAGACTTGAGTTGCCAATAAAACTTGCTCGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATTACATATGTTGCAAGAGCAACCAGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGCACCATTTTAG

mRNA sequence

ATGGATTTTCTATTTGGATTACCTCGTACATCTAGTGGACATGATGGTATATGGGTAATAGTAGTTAGACTCACGAAGACGGTACGATTTATATCGATTAAAGCGACATCTACGTTAGACCAGTTAGCTAGATCATATGTTGATAAGATTATTAGTCAGCATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCATAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGACGGTCAGTCCGAGAGGACAATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAATCTAGTATCGGTATGGCACCATATGAGGCCTTATACGGGAGACCATGCAAAACTCTTGTGTGTTGGAATGAAGTGGGAGAGCGAAAGTTAGTAGGTCCTGAGTTGGTTCAGACTACGACAAACAATATTAAGTTAATTAGAGAAAACCTGAAGATAGCCCAAGATCGGCAGAGAAGTTATGCAAATAAGCGACGAAGAAACTTAGAATTCCAAGCTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGCTGTTTTTCATTTCAGAAGAAAAGGTAAGTTCAGTCCTAGATATATTGGGTCATATCAGATAATGAAACGAGTGGGACCAGCAGCATATAGACTTGAGTTGCCAATAAAACTTGCTCGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATTACATATGTTGCAAGAGCAACCAGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGCACCATTTTAG

Coding sequence (CDS)

ATGGATTTTCTATTTGGATTACCTCGTACATCTAGTGGACATGATGGTATATGGGTAATAGTAGTTAGACTCACGAAGACGGTACGATTTATATCGATTAAAGCGACATCTACGTTAGACCAGTTAGCTAGATCATATGTTGATAAGATTATTAGTCAGCATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCATAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGACGGTCAGTCCGAGAGGACAATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAATCTAGTATCGGTATGGCACCATATGAGGCCTTATACGGGAGACCATGCAAAACTCTTGTGTGTTGGAATGAAGTGGGAGAGCGAAAGTTAGTAGGTCCTGAGTTGGTTCAGACTACGACAAACAATATTAAGTTAATTAGAGAAAACCTGAAGATAGCCCAAGATCGGCAGAGAAGTTATGCAAATAAGCGACGAAGAAACTTAGAATTCCAAGCTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGCTGTTTTTCATTTCAGAAGAAAAGGTAAGTTCAGTCCTAGATATATTGGGTCATATCAGATAATGAAACGAGTGGGACCAGCAGCATATAGACTTGAGTTGCCAATAAAACTTGCTCGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATTACATATGTTGCAAGAGCAACCAGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGCACCATTTTAG

Protein sequence

MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSIVSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIKLIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQIMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAPF

Homology

[Close]

BLAST of Cmc08g0222341 vs. NCBI nr
Match: KAA0059508.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 551.2 bits (1419), Expect = 5.5e-153
Identity = 269/298 (90.27%), Postives = 280/298 (93.96%), Query Frame = 0


Query: 1   MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
           MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 487 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 546

Query: 61  VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
           VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 547 VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 606

Query: 121 DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
           DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 607 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 666

Query: 181 LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
           LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 667 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 726

Query: 241 IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
           I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 727 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 784

[Close]

BLAST of Cmc08g0222341 vs. NCBI nr
Match: TYK05214.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 547.4 bits (1409), Expect = 7.9e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1   MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
           MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 668 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 727

Query: 61  VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
           VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 728 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 787

Query: 121 DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
           DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 788 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 847

Query: 181 LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
           LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 848 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 907

Query: 241 IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
           I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 908 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 965

[Close]

BLAST of Cmc08g0222341 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 547.4 bits (1409), Expect = 7.9e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1   MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
           MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 273 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 332

Query: 61  VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
           VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 333 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 392

Query: 121 DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
           DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 393 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 452

Query: 181 LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
           LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 453 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 512

Query: 241 IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
           I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 513 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 570

[Close]

BLAST of Cmc08g0222341 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 547.4 bits (1409), Expect = 7.9e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 795  MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 854

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 855  VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 914

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
            DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 915  DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 974

Query: 181  LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
            LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 975  LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1034

Query: 241  IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
            I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 1035 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 1092

[Close]

BLAST of Cmc08g0222341 vs. NCBI nr
Match: KAA0059912.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 547.4 bits (1409), Expect = 7.9e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1   MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
           MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 463 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 522

Query: 61  VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
           VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 523 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 582

Query: 121 DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
           DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 583 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 642

Query: 181 LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
           LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 643 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 702

Query: 241 IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
           I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 703 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 760

[Close]

BLAST of Cmc08g0222341 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 98/292 (33.56%), Postives = 146/292 (50.00%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDF+ GLP TS+  + I V+V R +K   FI+ + T    QL       I S HG P +I
Sbjct: 1174 MDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTI 1233

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
             SDRD R T+  +  L K +G     S++ HPQTDGQSERTIQTL  +LRA       +W
Sbjct: 1234 TSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNW 1293

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKT--LVCWNEVGERKLVGPELVQTTTNN 180
              +LP +EF YN++   ++G +P+E   G    T  +   +EV  R     EL +     
Sbjct: 1294 HVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKAL 1353

Query: 181  IKLIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGS 240
                +E L+ AQ    +  N+RR+ L    GD V +      A F      K    Y+G 
Sbjct: 1354 TIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVHRD---AYFKKGAYMKVQQIYVGP 1413

Query: 241  YQIMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKE 291
            ++++K++   AY L+L     + H V +V  L+K++  P    + +P+   E
Sbjct: 1414 FRVVKKINDNAYELDLNSHKKK-HRVINVQFLKKFVYRPDAYPKNKPISSTE 1461

[Close]

BLAST of Cmc08g0222341 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 2.2e-32
Identity = 95/273 (34.80%), Postives = 138/273 (50.55%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDF+ GLP TS+  + I V+V R +K   FI+ + T    QL       I S HG P +I
Sbjct: 1200 MDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTI 1259

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
             SDRD R T+  +  L K +G     S++ HPQTDGQSERTIQTL  +LRA V     +W
Sbjct: 1260 TSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNW 1319

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKT--LVCWNEVGERKLVGPELVQTTTNN 180
              +LP +EF YN++   ++G +P+E   G    T  +   +EV  R     EL +     
Sbjct: 1320 HVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKAL 1379

Query: 181  IKLIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGS 240
                +E L+ AQ    +  N+RR+ L    GD V +      A F      K    Y+G 
Sbjct: 1380 TIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVHRD---AYFKKGAYMKVQQIYVGP 1439

Query: 241  YQIMKRVGPAAYRLELPIKLARIHDVFHVSMLR 272
            ++++K++   AY L+L     + H V +V  L+
Sbjct: 1440 FRVVKKINDNAYELDLNSHKKK-HRVINVQFLK 1468

[Close]

BLAST of Cmc08g0222341 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-31
Identity = 85/277 (30.69%), Postives = 140/277 (50.54%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDF+  LP  SSG++ ++V+V R +K    +    + T +Q AR +  ++I+  G P  I
Sbjct: 989  MDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            ++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEAL--YGRPCKTLVCWNEVGERKLVGPELVQTTTNN 180
              H+ L++ +YNN+  S+  M P+E +  Y      L    E+        E  Q T   
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1168

Query: 181  IKLIRENLKIAQDRQRSYANKRRRNL-EFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIG 240
             + ++E+L     + + Y + + + + EFQ GD V +K +         +  K +P + G
Sbjct: 1169 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSNKLAPSFAG 1228

Query: 241  SYQIMKRVGPAAYRLELPIKLARI-HDVFHVSMLRKY 274
             + ++++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc08g0222341 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-31
Identity = 85/277 (30.69%), Postives = 140/277 (50.54%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDF+  LP  SSG++ ++V+V R +K    +    + T +Q AR +  ++I+  G P  I
Sbjct: 989  MDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            ++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEAL--YGRPCKTLVCWNEVGERKLVGPELVQTTTNN 180
              H+ L++ +YNN+  S+  M P+E +  Y      L    E+        E  Q T   
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1168

Query: 181  IKLIRENLKIAQDRQRSYANKRRRNL-EFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIG 240
             + ++E+L     + + Y + + + + EFQ GD V +K +         +  K +P + G
Sbjct: 1169 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSNKLAPSFAG 1228

Query: 241  SYQIMKRVGPAAYRLELPIKLARI-HDVFHVSMLRKY 274
             + ++++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc08g0222341 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-31
Identity = 85/277 (30.69%), Postives = 140/277 (50.54%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDF+  LP  SSG++ ++V+V R +K    +    + T +Q AR +  ++I+  G P  I
Sbjct: 989  MDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            ++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEAL--YGRPCKTLVCWNEVGERKLVGPELVQTTTNN 180
              H+ L++ +YNN+  S+  M P+E +  Y      L    E+        E  Q T   
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1168

Query: 181  IKLIRENLKIAQDRQRSYANKRRRNL-EFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIG 240
             + ++E+L     + + Y + + + + EFQ GD V +K +         +  K +P + G
Sbjct: 1169 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSNKLAPSFAG 1228

Query: 241  SYQIMKRVGPAAYRLELPIKLARI-HDVFHVSMLRKY 274
             + ++++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc08g0222341 vs. ExPASy TrEMBL
Match: A0A5A7UWG4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00130 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.6e-153
Identity = 269/298 (90.27%), Postives = 280/298 (93.96%), Query Frame = 0


Query: 1   MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
           MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 487 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 546

Query: 61  VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
           VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 547 VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 606

Query: 121 DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
           DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 607 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 666

Query: 181 LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
           LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 667 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 726

Query: 241 IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
           I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 727 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 784

[Close]

BLAST of Cmc08g0222341 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.8e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 1203 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1262

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 1263 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1322

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
            DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 1323 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1382

Query: 181  LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
            LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 1383 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1442

Query: 241  IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
            I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 1443 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 1500

[Close]

BLAST of Cmc08g0222341 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.8e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 1241 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1300

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 1301 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1360

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
            DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 1361 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1420

Query: 181  LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
            LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 1421 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1480

Query: 241  IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
            I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 1481 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 1538

[Close]

BLAST of Cmc08g0222341 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.8e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 1241 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1300

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 1301 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1360

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
            DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 1361 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1420

Query: 181  LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
            LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 1421 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1480

Query: 241  IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
            I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 1481 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 1538

[Close]

BLAST of Cmc08g0222341 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.8e-152
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0


Query: 1    MDFLFGLPRTSSGHDGIWVIVVRLTKTVRFISIKATSTLDQLARSYVDKIISQHGVPVSI 60
            MDFLFGLPRTSSGHDGIWVIV RLTKT RFI IK TSTLDQLAR YVDKI+SQ+GVPVSI
Sbjct: 1241 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1300

Query: 61   VSDRDPRFTSKFWHSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 120
            VSDRDPRFTSKFW SLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW
Sbjct: 1301 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1360

Query: 121  DTHLPLMEFAYNNSYQSSIGMAPYEALYGRPCKTLVCWNEVGERKLVGPELVQTTTNNIK 180
            DTHLPLMEFAYNN+YQSSIGMAPYEALYGRPC+T VCWNEVGERKLVGPELVQ TTNNIK
Sbjct: 1361 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1420

Query: 181  LIRENLKIAQDRQRSYANKRRRNLEFQAGDQVFLKLSPWRAVFHFRRKGKFSPRYIGSYQ 240
            LIRENL+ AQDRQ+SYA+KRRRNLEFQ GDQVFLKLSPWR V  F RKGK SPRYIG YQ
Sbjct: 1421 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1480

Query: 241  IMKRVGPAAYRLELPIKLARIHDVFHVSMLRKYIPDPLHMLQEQPVELKEDLSYVEAP 299
            I +RVGPAAYRLELPI+LARIHDVFHVSMLRKYIPDP H+LQ+QPVELKEDLSYVE P
Sbjct: 1481 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEP 1538

The following BLAST results are available for this feature:

BLAST of Cmc08g0222341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059508.1	5.5e-153	90.27	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK05214.1	7.9e-152	89.93	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053246.1	7.9e-152	89.93	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050493.1	7.9e-152	89.93	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0059912.1	7.9e-152	89.93	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0222341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.5e-33	33.56	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.2e-32	34.80	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	4.2e-31	30.69	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	4.2e-31	30.69	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.2e-31	30.69	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0222341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWG4	2.6e-153	90.27	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7U2V7	3.8e-152	89.93	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	3.8e-152	89.93	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	3.8e-152	89.93	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	3.8e-152	89.93	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]

BLAST of Cmc08g0222341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 172..192
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 105..298
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 105..298
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..193 e-value: 1.2E-41 score: 144.2
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..151 score: 17.073601
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0222341.1	Cmc08g0222341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding