Cmc08g0222311 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0222311
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr08: 10872023 .. 10873984 (+)
RNA-Seq ExpressionCmc08g0222311
SyntenyCmc08g0222311
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTCGAAAGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGTTGTTAGTCCTGGACATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTCGATGGCTAGTTTTAAATTTAAGGTAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCAAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAAAGAGGTTGATGTATGCCTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCTCAGAGAGATTGAGTTTGCCATAGAGTTGGAACCGAGCATAGTTCCTATATCCAGAGCCCCGTACAGAATGGCCACAGCAGAGTTGAAAGAACTGAAAGTGCAGTTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCACCAATTTTATTTGTTAAGAAGAAAGATGGATCAATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGTCCAGGATCGATGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCAGTCGGGATATCATCAGCTGAGGATTAAGGACGGTGATGTACTGAAGACGACCTTTCGTTCCAGATACGAACATTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAAAGTGTTTAGGGAGTTTCTAGACACTTTTATGATCATGTTTATTGATGACATCTTTATATATTCCAAGACGGAGGCCGAGCATGACGAACATTTACGTATGGTTCTGCAAACCCTTCAGGATAATAAATTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAAGTGTTCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTTTGGATCCAGCTAAGATAGAGGCAGTTACCAGCTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTTTTTGGAGCAAGACATGTAAGGACAGTTTCCAGAATCTTAAACAGAAGCTAGTTACTGCACTGGTTCTTACTATACCTGATGGTTCGGGCAGTTTTATGATTTATAGGGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGGAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAAAGCTTGAAACATTTCTTTACTCAGAAGGAATTGAATATGAGGCAGCGAGGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCATCCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGTAGTGTCAGTAGGGGCAGTCACTATGCAATTAGCCCAGTTGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTGAGAGTAACGATTCTTATTTGGTTGAGAAGCGTGGCTTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCAGATAGTGCAGTTAAAACATAA

mRNA sequence

ATGTTGTCGAAAGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGTTGTTAGTCCTGGACATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTCGATGGCTAGTTTTAAATTTAAGGTAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCAAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAAAGAGGTTGATGTATGCCTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCTCAGAGAGATTGAGTTTGCCATAGAGTTGGAACCGAGCATAGTTCCTATATCCAGAGCCCCGTACAGAATGGCCACAGCAGAGTTGAAAGAACTGAAAGTGCAGTTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCACCAATTTTATTTGTTAAGAAGAAAGATGGATCAATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGTCCAGGATCGATGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCAGTCGGGATATCATCAGCTGAGGATTAAGGACGGTGATGTACTGAAGACGACCTTTCGTTCCAGATACGAACATTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAAAGTGTTTAGGGAGTTTCTAGACACTTTTATGATCATGTTTATTGATGACATCTTTATATATTCCAAGACGGAGGCCGAGCATGACGAACATTTACGTATGGTTCTGCAAACCCTTCAGGATAATAAATTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAAGTGTTCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTTTGGATCCAGCTAAGATAGAGGCAGTTACCAGCTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTTTTTGGAGCAAGACATGTAAGGACAGTTTCCAGAATCTTAAACAGAAGCTAGTTACTGCACTGGTTCTTACTATACCTGATGGTTCGGGCAGTTTTATGATTTATAGGGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGGAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAAAGCTTGAAACATTTCTTTACTCAGAAGGAATTGAATATGAGGCAGCGAGGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCATCCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGTAGTGTCAGTAGGGGCAGTCACTATGCAATTAGCCCAGTTGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTGAGAGTAACGATTCTTATTTGGTTGAGAAGCGTGGCTTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCAGATAGTGCAGTTAAAACATAA

Coding sequence (CDS)

ATGTTGTCGAAAGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGTTGTTAGTCCTGGACATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTCGATGGCTAGTTTTAAATTTAAGGTAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCAAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAAAGAGGTTGATGTATGCCTGTCATCAGAACCAGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCTCAGAGAGATTGAGTTTGCCATAGAGTTGGAACCGAGCATAGTTCCTATATCCAGAGCCCCGTACAGAATGGCCACAGCAGAGTTGAAAGAACTGAAAGTGCAGTTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCACCAATTTTATTTGTTAAGAAGAAAGATGGATCAATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGTCCAGGATCGATGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCAGTCGGGATATCATCAGCTGAGGATTAAGGACGGTGATGTACTGAAGACGACCTTTCGTTCCAGATACGAACATTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAAAGTGTTTAGGGAGTTTCTAGACACTTTTATGATCATGTTTATTGATGACATCTTTATATATTCCAAGACGGAGGCCGAGCATGACGAACATTTACGTATGGTTCTGCAAACCCTTCAGGATAATAAATTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAAGTGTTCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTTTGGATCCAGCTAAGATAGAGGCAGTTACCAGCTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTTTTTGGAGCAAGACATGTAAGGACAGTTTCCAGAATCTTAAACAGAAGCTAGTTACTGCACTGGTTCTTACTATACCTGATGGTTCGGGCAGTTTTATGATTTATAGGGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGGAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAAAGCTTGAAACATTTCTTTACTCAGAAGGAATTGAATATGAGGCAGCGAGGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCATCCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGTAGTGTCAGTAGGGGCAGTCACTATGCAATTAGCCCAGTTGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTGAGAGTAACGATTCTTATTTGGTTGAGAAGCGTGGCTTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCAGATAGTGCAGTTAAAACATAA

Protein sequence

MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDVFPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFIDDIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSFQNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEILYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTLRQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
Homology
[Close]
BLAST of Cmc08g0222311 vs. NCBI nr
Match: KAA0026020.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1291.2 bits (3340), Expect = 0.0e+00
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS
Sbjct: 528  MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 587

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV
Sbjct: 588  MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 647

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS
Sbjct: 648  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 707

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG
Sbjct: 708  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 767

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID
Sbjct: 768  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 827

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK
Sbjct: 828  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 887

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF
Sbjct: 888  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 947

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT
Sbjct: 948  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 1007

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI
Sbjct: 1008 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 1067

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL
Sbjct: 1068 LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 1127

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
Sbjct: 1128 RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 1180

[Close]
BLAST of Cmc08g0222311 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 604/653 (92.50%), Postives = 625/653 (95.71%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEV FNPPS
Sbjct: 799  MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 858

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFK  GSRSLPQVISA+RASKLLSQGTW ILASVVDT+EVDV LSSEPVVRDYPDV
Sbjct: 859  MASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV 918

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPYRMA AELKELKVQLQELLDKGFIRPS+S
Sbjct: 919  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSMS 978

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL RIDDLFDQLQGATVFSKIDL+SG
Sbjct: 979  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 1038

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKDGDV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 1039 YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 1098

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLR+VLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 1099 DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1158

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIA PLTQLTRKGAPF WSK C+DSF
Sbjct: 1159 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSF 1218

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTALVLT+PDGSGSF+IY DASKKGLGCVLMQQGKVVAYASRQLKSHE+NYPT
Sbjct: 1219 QNLKQKLVTALVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 1278

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKELNMRQR WLELVKDYDCEI
Sbjct: 1279 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1338

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVT QLAQLTVQ TL
Sbjct: 1339 LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTTQLAQLTVQSTL 1398

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+ ND YLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Sbjct: 1399 RQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT 1451

[Close]
BLAST of Cmc08g0222311 vs. NCBI nr
Match: KAA0040871.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 600/653 (91.88%), Postives = 623/653 (95.41%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEV FNP S
Sbjct: 636  MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPHS 695

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFK EGSRSLPQVISA+RASKLLSQGTW ILASVVDT+EVDV LSSEPVVRDYPDV
Sbjct: 696  MASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV 755

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPY+MA AELKELKVQLQELLDKGFIRPSVS
Sbjct: 756  FPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS 815

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKN+YPL +IDDLFDQLQGATVFSKIDL+SG
Sbjct: 816  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPKIDDLFDQLQGATVFSKIDLRSG 875

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKDGDV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 876  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 935

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLR+VLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 936  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 995

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPF WSK C+DSF
Sbjct: 996  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 1055

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTALVLT+PDGSGSF+IY DAS KGLGCVLMQQGKVVA+ASRQLKSHE+NYPT
Sbjct: 1056 QNLKQKLVTALVLTVPDGSGSFVIYSDASMKGLGCVLMQQGKVVAFASRQLKSHEQNYPT 1115

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKE NMRQR WLELVKDYDCEI
Sbjct: 1116 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEFNMRQRRWLELVKDYDCEI 1175

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVTMQLAQLTVQ TL
Sbjct: 1176 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1235

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+ ND YLVEKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAVKT
Sbjct: 1236 RQRIIDAQGNDHYLVEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKT 1288

[Close]
BLAST of Cmc08g0222311 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 601/653 (92.04%), Postives = 621/653 (95.10%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVK CQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAA+HASIDCSRKEV FNPPS
Sbjct: 427  MLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEVTFNPPS 486

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
             ASFKFK  GSRSLPQVISA+RASKLLSQGTW ILASVVDT+E DV LSSEPVVRDYPDV
Sbjct: 487  RASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 546

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPYRMA AELKELKVQLQELLDKGFIRPSVS
Sbjct: 547  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 606

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL RIDDLFDQLQGATVFSKIDL+SG
Sbjct: 607  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 666

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKD DV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 667  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 726

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLRMVLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 727  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 786

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPF WSK C+DSF
Sbjct: 787  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 846

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTA VLT+PDGSGSF+IY DASKKGLGCVLMQQGKVVAYASRQLKSHE+NYPT
Sbjct: 847  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 906

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKELNMRQR WLELVKDYDCEI
Sbjct: 907  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 966

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVTMQLAQLTVQ TL
Sbjct: 967  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1026

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+SND YLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Sbjct: 1027 RQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKT 1079

[Close]
BLAST of Cmc08g0222311 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 600/653 (91.88%), Postives = 621/653 (95.10%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAANHASIDCSRKEV FNPPS
Sbjct: 681  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 740

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFK  GS+SLPQVISA+RASKLLSQGTW ILASVVDT+E DV LSSEPVVRDYPDV
Sbjct: 741  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 800

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPYRMA AELKELKVQLQELLDKGFIRPSVS
Sbjct: 801  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 860

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL RIDDLFDQLQGATVFSKIDL+SG
Sbjct: 861  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 920

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKD DV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 921  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 980

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLRMVLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 981  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1040

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPF WSK C+DSF
Sbjct: 1041 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 1100

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            Q LKQKLVTA VLT+PDGSGSF+IY DASKKGLGCVLMQQGKVVAYASRQLKSHE+NYPT
Sbjct: 1101 QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 1160

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKELNMRQR WLELVKDYDCEI
Sbjct: 1161 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1220

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVTMQLAQLTVQ TL
Sbjct: 1221 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1280

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+SND YLVEKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDSAVKT
Sbjct: 1281 RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKT 1333

[Close]
BLAST of Cmc08g0222311 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-81
Identity = 166/450 (36.89%), Postives = 260/450 (57.78%), Query Frame = 0 

Query: 113 VVRDYPDVFPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDK 172
           +++ Y D+   E   L    + +  I  + ++   S+  Y  A  +  E++ Q+Q++L++
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQ--EVESQIQDMLNQ 235

Query: 173 GFIRPSVSPWGAPILFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQ 232
           G IR S SP+ +PI  V KK+D S     R+ IDYR+LN++TV +R+P+  +D++  +L 
Sbjct: 236 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 295

Query: 233 GATVFSKIDLQSGYHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVF 292
               F+ IDL  G+HQ+ +    V KT F +++ HYE++ M FGL NAPA F   MN + 
Sbjct: 296 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDIL 355

Query: 293 REFLDTFMIMFIDDIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGH 352
           R  L+   ++++DDI ++S +  EH + L +V + L    L  +  KCEF  ++  FLGH
Sbjct: 356 RPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGH 415

Query: 353 VVSKAGVSLDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKG 412
           V++  G+  +P KIEA+  +P P+   E+++FLGL GYYR+F+ NF  IA P+T+  +K 
Sbjct: 416 VLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKN 475

Query: 413 APFFWSKTCKDS-FQNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAY 472
                +    DS F+ LK  +    +L +PD +  F +  DAS   LG VL Q G  ++Y
Sbjct: 476 MKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSY 535

Query: 473 ASRQLKSHEENYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQ 532
            SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L   +  K+ N + 
Sbjct: 536 ISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKL 595

Query: 533 RGWLELVKDYDCEILYHPSKANVVADALSR 557
             W   + ++D +I Y   K N VADALSR
Sbjct: 596 TRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]
BLAST of Cmc08g0222311 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-81
Identity = 157/417 (37.65%), Postives = 240/417 (57.55%), Query Frame = 0 

Query: 146 PISRAPYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPILFVKKKD-----GSMRLCI 205
           PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 206 DYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVLKTTFRSRY 265
           DYR+LN++T+ +RYP+  +D++  +L     F+ IDL  G+HQ+ + +  + KT F ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 266 EHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFIDDIFIYSKTEAEHDEHLRMVL 325
            HYE++ M FGL NAPA F   MN + R  L+   ++++DDI I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 326 QTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAKIEAVTSWPRPSTVSEVRSFL 385
             L D  L  +  KCEF  K+  FLGH+V+  G+  +P K++A+ S+P P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 386 GLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSK-TCKDSFQNLKQKLVTALVLTIPDGS 445
           GL GYYR+F+ N+  IA P+T   +K       K    ++F+ LK  ++   +L +PD  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 446 GSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPTHDLELAAVVFALKIWRHYL 505
             F++  DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 565

Query: 506 YGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEILYHPSKANVVADALSR 557
            G +  I +DH+ L+     KE   +   W   + +Y  +I Y   K N VADALSR
Sbjct: 566 LGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]
BLAST of Cmc08g0222311 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.1e-79
Identity = 184/566 (32.51%), Postives = 294/566 (51.94%), Query Frame = 0 

Query: 16  GHVIEVTLLVLDML-DFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKVEGSRSL 75
           G+  ++T  VL  L  FD I+G D L    A +D     +   P            S ++
Sbjct: 15  GNDSDITFFVLPNLHSFDGIIGDDTLKDLKAIVDRKNNCLIITPG--IKIPLLARASINV 74

Query: 76  PQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDVFPEELPGLPPLREI 135
             +++A         GT  IL S++                ++P +F   L G+     +
Sbjct: 75  NPLLAAEH-----PDGTQEILNSLLG---------------EFPRIFEPPLSGM----SV 134

Query: 136 EFAIELE---PSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPILFVKK 195
           E A++ E    +  PI    Y        E++ Q+ ELL  G IRPS SP+ +PI  V K
Sbjct: 135 ETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPK 194

Query: 196 K-----DGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSGYHQLRI 255
           K     +   R+ +D++ LN VT+ + YP+  I+     L  A  F+ +DL SG+HQ+ +
Sbjct: 195 KPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHM 254

Query: 256 KDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFIDDIFIYS 315
           K+ D+ KT F +    YEF+ + FGL NAPA+F  +++ + RE +     ++IDDI ++S
Sbjct: 255 KESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFS 314

Query: 316 KTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAKIEAVTS 375
           +    H ++LR+VL +L    L     K  F   QV FLG++V+  G+  DP K+ A++ 
Sbjct: 315 EDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISE 374

Query: 376 WPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTR-----------KGAPFFWSKT 435
            P P++V E++ FLG+  YYR+F++++ ++A PLT LTR              P    +T
Sbjct: 375 MPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDET 434

Query: 436 CKDSFQNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQ----QGKVVAYASRQL 495
              SF +LK  L ++ +L  P  +  F +  DAS   +G VL Q    + + +AY SR L
Sbjct: 435 ALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSL 494

Query: 496 KSHEENYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKHFFTQKELNMRQRGWL 555
              EENY T + E+ A++++L   R YLYG   I+++TDH+ L      +  N + + W 
Sbjct: 495 NKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWK 554

Query: 556 ELVKDYDCEILYHPSKANVVADALSR 557
             +++Y+CE++Y P K+NVVADALSR
Sbjct: 555 ARIEEYNCELIYKPGKSNVVADALSR 554

[Close]
BLAST of Cmc08g0222311 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.2e-76
Identity = 172/538 (31.97%), Postives = 290/538 (53.90%), Query Frame = 0 

Query: 123 EELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P++ +EF +EL      +    Y +   +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSGYH 242
             P++FV KK+G++R+ +DY+ LNK    N YPL  I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFIDDI 302
            +R++ GD  K  FR     +E++VM +G++ APA F   +N +  E  ++ ++ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 FIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAKIE 362
            I+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSFQN 422
            V  W +P    E+R FLG   Y R+F+    ++  PL  L +K   + W+ T   + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 423 LKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGK-----VVAYASRQLKSHEEN 482
           +KQ LV+  VL   D S   ++  DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 483 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKHFFTQKE--LNMRQRGWLELV 542
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R   W   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 543 KDYDCEILYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQ 602
           +D++ EI Y P  AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 603 LTVQLTLRQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDS 650
           +++    + +++   +ND+ L+    L    + VE +I    GLL   +  + +P+D+
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909

[Close]
BLAST of Cmc08g0222311 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.2e-76
Identity = 172/538 (31.97%), Postives = 290/538 (53.90%), Query Frame = 0 

Query: 123 EELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P++ +EF +EL      +    Y +   +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSGYH 242
             P++FV KK+G++R+ +DY+ LNK    N YPL  I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFIDDI 302
            +R++ GD  K  FR     +E++VM +G++ APA F   +N +  E  ++ ++ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 FIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAKIE 362
            I+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSFQN 422
            V  W +P    E+R FLG   Y R+F+    ++  PL  L +K   + W+ T   + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 423 LKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGK-----VVAYASRQLKSHEEN 482
           +KQ LV+  VL   D S   ++  DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 483 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKHFFTQKE--LNMRQRGWLELV 542
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R   W   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 543 KDYDCEILYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQ 602
           +D++ EI Y P  AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 603 LTVQLTLRQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDS 650
           +++    + +++   +ND+ L+    L    + VE +I    GLL   +  + +P+D+
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDT 909

[Close]
BLAST of Cmc08g0222311 vs. ExPASy TrEMBL
Match: A0A5A7SIL8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003470 PE=4 SV=1)

HSP 1 Score: 1291.2 bits (3340), Expect = 0.0e+00
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS
Sbjct: 528  MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 587

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV
Sbjct: 588  MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 647

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS
Sbjct: 648  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 707

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG
Sbjct: 708  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 767

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID
Sbjct: 768  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 827

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK
Sbjct: 828  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 887

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF
Sbjct: 888  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 947

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT
Sbjct: 948  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 1007

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI
Sbjct: 1008 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 1067

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL
Sbjct: 1068 LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 1127

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT
Sbjct: 1128 RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 1180

[Close]
BLAST of Cmc08g0222311 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 604/653 (92.50%), Postives = 625/653 (95.71%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEV FNPPS
Sbjct: 799  MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 858

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFK  GSRSLPQVISA+RASKLLSQGTW ILASVVDT+EVDV LSSEPVVRDYPDV
Sbjct: 859  MASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV 918

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPYRMA AELKELKVQLQELLDKGFIRPS+S
Sbjct: 919  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSMS 978

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL RIDDLFDQLQGATVFSKIDL+SG
Sbjct: 979  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 1038

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKDGDV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 1039 YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 1098

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLR+VLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 1099 DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1158

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIA PLTQLTRKGAPF WSK C+DSF
Sbjct: 1159 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSF 1218

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTALVLT+PDGSGSF+IY DASKKGLGCVLMQQGKVVAYASRQLKSHE+NYPT
Sbjct: 1219 QNLKQKLVTALVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 1278

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKELNMRQR WLELVKDYDCEI
Sbjct: 1279 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1338

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVT QLAQLTVQ TL
Sbjct: 1339 LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTTQLAQLTVQSTL 1398

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+ ND YLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKT
Sbjct: 1399 RQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT 1451

[Close]
BLAST of Cmc08g0222311 vs. ExPASy TrEMBL
Match: A0A5A7TGS7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00240 PE=4 SV=1)

HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 600/653 (91.88%), Postives = 623/653 (95.41%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEV FNP S
Sbjct: 636  MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPHS 695

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFK EGSRSLPQVISA+RASKLLSQGTW ILASVVDT+EVDV LSSEPVVRDYPDV
Sbjct: 696  MASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV 755

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPY+MA AELKELKVQLQELLDKGFIRPSVS
Sbjct: 756  FPEELPGLPPHREVEFAIELEPGTVPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVS 815

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKN+YPL +IDDLFDQLQGATVFSKIDL+SG
Sbjct: 816  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPKIDDLFDQLQGATVFSKIDLRSG 875

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKDGDV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 876  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 935

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLR+VLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 936  DILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 995

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPF WSK C+DSF
Sbjct: 996  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 1055

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTALVLT+PDGSGSF+IY DAS KGLGCVLMQQGKVVA+ASRQLKSHE+NYPT
Sbjct: 1056 QNLKQKLVTALVLTVPDGSGSFVIYSDASMKGLGCVLMQQGKVVAFASRQLKSHEQNYPT 1115

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKE NMRQR WLELVKDYDCEI
Sbjct: 1116 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKEFNMRQRRWLELVKDYDCEI 1175

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVTMQLAQLTVQ TL
Sbjct: 1176 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1235

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+ ND YLVEKRGLAEAGQAVEFS SSDGGLLFERRLCVPSDSAVKT
Sbjct: 1236 RQRIIDAQGNDHYLVEKRGLAEAGQAVEFSTSSDGGLLFERRLCVPSDSAVKT 1288

[Close]
BLAST of Cmc08g0222311 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 600/653 (91.88%), Postives = 621/653 (95.10%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAANHASIDCSRKEV FNPPS
Sbjct: 681  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 740

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
            MASFKFK  GS+SLPQVISA+RASKLLSQGTW ILASVVDT+E DV LSSEPVVRDYPDV
Sbjct: 741  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 800

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPYRMA AELKELKVQLQELLDKGFIRPSVS
Sbjct: 801  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 860

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL RIDDLFDQLQGATVFSKIDL+SG
Sbjct: 861  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 920

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKD DV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 921  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 980

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLRMVLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 981  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1040

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPF WSK C+DSF
Sbjct: 1041 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 1100

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            Q LKQKLVTA VLT+PDGSGSF+IY DASKKGLGCVLMQQGKVVAYASRQLKSHE+NYPT
Sbjct: 1101 QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 1160

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKELNMRQR WLELVKDYDCEI
Sbjct: 1161 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1220

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVTMQLAQLTVQ TL
Sbjct: 1221 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1280

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+SND YLVEKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDSAVKT
Sbjct: 1281 RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKT 1333

[Close]
BLAST of Cmc08g0222311 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 601/653 (92.04%), Postives = 621/653 (95.10%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPS 60
            MLSKEKVK CQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAA+HASIDCSRKEV FNPPS
Sbjct: 427  MLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEVTFNPPS 486

Query: 61   MASFKFKVEGSRSLPQVISAMRASKLLSQGTWSILASVVDTKEVDVCLSSEPVVRDYPDV 120
             ASFKFK  GSRSLPQVISA+RASKLLSQGTW ILASVVDT+E DV LSSEPVVRDYPDV
Sbjct: 487  RASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 546

Query: 121  FPEELPGLPPLREIEFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPP RE+EFAIELEP  VPISRAPYRMA AELKELKVQLQELLDKGFIRPSVS
Sbjct: 547  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 606

Query: 181  PWGAPILFVKKKDGSMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSG 240
            PWGAP+LFVKKKDGSMRLCIDYRELNKVTVKNRYPL RIDDLFDQLQGATVFSKIDL+SG
Sbjct: 607  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 666

Query: 241  YHQLRIKDGDVLKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNKVFREFLDTFMIMFID 300
            YHQLRIKD DV KT FRSRY HYEFIVMSFGLTNAPAVFMDLMN+VFREFLDTF+I+FID
Sbjct: 667  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 726

Query: 301  DIFIYSKTEAEHDEHLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLGHVVSKAGVSLDPAK 360
            DI IYSKTEAEH+EHLRMVLQTL+DNKLYAKFSKCEFWLKQV FLGHVVSKAGVS+DPAK
Sbjct: 727  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 786

Query: 361  IEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSF 420
            IEAVT W RPSTVSEVRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPF WSK C+DSF
Sbjct: 787  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 846

Query: 421  QNLKQKLVTALVLTIPDGSGSFMIYRDASKKGLGCVLMQQGKVVAYASRQLKSHEENYPT 480
            QNLKQKLVTA VLT+PDGSGSF+IY DASKKGLGCVLMQQGKVVAYASRQLKSHE+NYPT
Sbjct: 847  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 906

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKHFFTQKELNMRQRGWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK+FFTQKELNMRQR WLELVKDYDCEI
Sbjct: 907  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 966

Query: 541  LYHPSKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVSVGAVTMQLAQLTVQLTL 600
            LYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEI VSVGAVTMQLAQLTVQ TL
Sbjct: 967  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1026

Query: 601  RQKIIDAESNDSYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKT 654
            RQ+IIDA+SND YLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKT
Sbjct: 1027 RQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKT 1079

[Close]
BLAST of Cmc08g0222311 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 5.4e-26
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0 

Query: 315 HLRMVLQTLQDNKLYAKFSKCEFWLKQVFFLG--HVVSKAGVSLDPAKIEAVTSWPRPST 374
           HL MVLQ  + ++ YA   KC F   Q+ +LG  H++S  GVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 375 VSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFFWSKTCKDSFQNLKQKLVTALV 434
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T  V
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 435 LTIPD 438
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:
BLAST of Cmc08g0222311 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0026020.10.0e+00100.00pol protein [Cucumis melo var. makuwa][more]
KAA0031931.10.0e+0092.50pol protein [Cucumis melo var. makuwa][more]
KAA0040871.10.0e+0091.88DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0048687.10.0e+0092.04pol protein [Cucumis melo var. makuwa][more]
TYK01613.10.0e+0091.88pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc08g0222311 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P043231.5e-8136.89Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208252.0e-8137.65Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P94.1e-7932.51Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P0CT413.2e-7631.97Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT343.2e-7631.97Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of Cmc08g0222311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SIL80.0e+00100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34... [more]
A0A5A7SQU80.0e+0092.50Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13... [more]
A0A5A7TGS70.0e+0091.88Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34... [more]
A0A5D3BPI10.0e+0091.88Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
A0A5A7U3300.0e+0092.04Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
BLAST of Cmc08g0222311 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.15.4e-2645.60DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..172
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 135..274
e-value: 4.6E-88
score: 296.0
NoneNo IPR availablePFAMPF08284RVP_2coord: 4..58
e-value: 2.9E-15
score: 56.2
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 21..563
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 21..563
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 447..558
e-value: 1.20509E-53
score: 177.685
NoneNo IPR availableCDDcd01647RT_LTRcoord: 173..349
e-value: 6.52575E-88
score: 269.85
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 1..41
e-value: 1.38893E-8
score: 50.4128
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 2..65
e-value: 8.2E-13
score: 50.2
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 214..349
e-value: 4.6E-88
score: 296.0
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 359..448
e-value: 1.2E-28
score: 100.9
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 189..348
e-value: 4.7E-26
score: 91.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 170..349
score: 10.843521
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 440..536
e-value: 1.1E-31
score: 109.3
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 113..542

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0222311.1Cmc08g0222311.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0016020 membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding