Cmc08g0221741 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0221741
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 9764037 .. 9764420 (+)
RNA-Seq Expression	Cmc08g0221741
Synteny	Cmc08g0221741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCTTTGCATTGATTACAAAGAGCTGAATAAGGTGATAGTCAAGAACCGTTATCCATTACCTAGAATTGATGATTTATTTGATCAGTTACGAGGAGCCACTGTTTTCTCTAAGATTGATTTACATTTAGGCTATCACCAATTAAGAATTAGAGACGGTGATATTCCTAAGACTTCTTTTCGTTCCAAATATGGAAATTACGAGTTCACCGTAATATCCTTTGGCTTGACCAATGCTGTTGTTGTATTTATGGATCTGATGAACAAGGTGTTTAAGGATTTCTTAGACACTTTTCTTATAGTTTTTATTGATGACATCTTGGTTTATTCCAACTCAACCCTTGATTATAAAATTCAAAATGCTTCGAGAGTCTTCAATTAG

mRNA sequence

ATGTGCCTTTGCATTGATTACAAAGAGCTGAATAAGGTGATAGTCAAGAACCGTTATCCATTACCTAGAATTGATGATTTATTTGATCAGTTACGAGGAGCCACTGTTTTCTCTAAGATTGATTTACATTTAGGCTATCACCAATTAAGAATTAGAGACGGTGATATTCCTAAGACTTCTTTTCGTTCCAAATATGGAAATTACGAGTTCACCGTAATATCCTTTGGCTTGACCAATGCTGTTGTTGTATTTATGGATCTGATGAACAAGGTGTTTAAGGATTTCTTAGACACTTTTCTTATAGTTTTTATTGATGACATCTTGGTTTATTCCAACTCAACCCTTGATTATAAAATTCAAAATGCTTCGAGAGTCTTCAATTAG

Coding sequence (CDS)

ATGTGCCTTTGCATTGATTACAAAGAGCTGAATAAGGTGATAGTCAAGAACCGTTATCCATTACCTAGAATTGATGATTTATTTGATCAGTTACGAGGAGCCACTGTTTTCTCTAAGATTGATTTACATTTAGGCTATCACCAATTAAGAATTAGAGACGGTGATATTCCTAAGACTTCTTTTCGTTCCAAATATGGAAATTACGAGTTCACCGTAATATCCTTTGGCTTGACCAATGCTGTTGTTGTATTTATGGATCTGATGAACAAGGTGTTTAAGGATTTCTTAGACACTTTTCTTATAGTTTTTATTGATGACATCTTGGTTTATTCCAACTCAACCCTTGATTATAAAATTCAAAATGCTTCGAGAGTCTTCAATTAG

Protein sequence

MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYKIQNASRVFN

Homology

[Close]

BLAST of Cmc08g0221741 vs. NCBI nr
Match: KAA0054634.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48
Identity = 95/118 (80.51%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL  GYHQLRIRDGDIPKT+
Sbjct: 610 MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTT 669

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VFKDFLD+F+IVFIDDIL+YS +  +++
Sbjct: 670 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE 727

[Close]

BLAST of Cmc08g0221741 vs. NCBI nr
Match: KAA0066274.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 92/118 (77.97%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL  GYHQLRI+DGD+PKT+
Sbjct: 43  MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 102

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VF++FLDTF+IVFIDDIL+YS +  +++
Sbjct: 103 FRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 160

[Close]

BLAST of Cmc08g0221741 vs. NCBI nr
Match: TYK08914.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 95/118 (80.51%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           M LCIDY+ELNKV VKNRYPLPRIDDLFDQLRGATVFSKIDL  GYHQLRIRDGDIPKT+
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLRGATVFSKIDLRSGYHQLRIRDGDIPKTA 60

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VFKDFLD+F+IVFIDDIL+YS +  +++
Sbjct: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE 118

[Close]

BLAST of Cmc08g0221741 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47
Identity = 95/118 (80.51%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           M LCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL  GYHQLRIRDGDIPKT+
Sbjct: 179 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 238

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF VISFGLTNA  VFMDLMN+VFKDFLD+F+IVFIDDIL+YS +  +++
Sbjct: 239 FRSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE 296

[Close]

BLAST of Cmc08g0221741 vs. NCBI nr
Match: KAA0056186.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47
Identity = 92/118 (77.97%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKI L LGYHQLRI+DGD+PKT+
Sbjct: 441 MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIYLRLGYHQLRIKDGDVPKTA 500

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VF++FLDTF+IVFIDDIL+YS + ++++
Sbjct: 501 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHE 558

[Close]

BLAST of Cmc08g0221741 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.2e-31
Identity = 59/109 (54.13%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 3   LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFR 62
           +CIDY+ L KV +KN+YP+PR+DDLFD+L  AT F+K+DL  GY Q+RI  GD PKT+  
Sbjct: 8   MCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTTCV 67

Query: 63  SKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYS 112
           ++YG++EF V+ FGLTNA+  F +LMN V  ++LD F++V++DD++VY+
Sbjct: 68  TRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYT 116

[Close]

BLAST of Cmc08g0221741 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 3   LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFR 62
           LC+DY+ LNK  + + +PLPRID+L  ++  A +F+ +DLH GYHQ+ +   D  KT+F 
Sbjct: 648 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 707

Query: 63  SKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNS 114
           +  G YE+TV+ FGL NA   F   M   F+D    F+ V++DDIL++S S
Sbjct: 708 TPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSES 756

[Close]

BLAST of Cmc08g0221741 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 3   LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFR 62
           LC+DY+ LNK  + + +PLPRID+L  ++  A +F+ +DLH GYHQ+ +   D  KT+F 
Sbjct: 674 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 733

Query: 63  SKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNS 114
           +  G YE+TV+ FGL NA   F   M   F+D    F+ V++DDIL++S S
Sbjct: 734 TPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSES 782

[Close]

BLAST of Cmc08g0221741 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.2e-20
Identity = 46/124 (37.10%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 3   LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFR 62
           + IDY++LN++ V +R+P+P +D++  +L     F+ IDL  G+HQ+ +    + KT+F 
Sbjct: 264 IVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFS 323

Query: 63  SKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYKIQNA 122
           +K+G+YE+  + FGL NA   F   MN + +  L+   +V++DDI+V+S S LD  +Q+ 
Sbjct: 324 TKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTS-LDEHLQSL 383

Query: 123 SRVF 127
             VF
Sbjct: 384 GLVF 386

[Close]

BLAST of Cmc08g0221741 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-19
Identity = 41/113 (36.28%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 5   IDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSK 64
           IDY++LN++ + +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KT+F +K
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 65  YGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDY 118
            G+YE+  + FGL NA   F   MN + +  L+   +V++DDI+++S S  ++
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEH 377

[Close]

BLAST of Cmc08g0221741 vs. ExPASy TrEMBL
Match: A0A5A7UHL7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004390 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.7e-49
Identity = 95/118 (80.51%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL  GYHQLRIRDGDIPKT+
Sbjct: 610 MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTT 669

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VFKDFLD+F+IVFIDDIL+YS +  +++
Sbjct: 670 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE 727

[Close]

BLAST of Cmc08g0221741 vs. ExPASy TrEMBL
Match: A0A5A7VG41 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003230 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.9e-48
Identity = 92/118 (77.97%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL  GYHQLRI+DGD+PKT+
Sbjct: 43  MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 102

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VF++FLDTF+IVFIDDIL+YS +  +++
Sbjct: 103 FRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE 160

[Close]

BLAST of Cmc08g0221741 vs. ExPASy TrEMBL
Match: A0A5D3CCF4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold61802G00010 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.9e-48
Identity = 95/118 (80.51%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           M LCIDY+ELNKV VKNRYPLPRIDDLFDQLRGATVFSKIDL  GYHQLRIRDGDIPKT+
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLRGATVFSKIDLRSGYHQLRIRDGDIPKTA 60

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VFKDFLD+F+IVFIDDIL+YS +  +++
Sbjct: 61  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE 118

[Close]

BLAST of Cmc08g0221741 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.4e-48
Identity = 95/118 (80.51%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           M LCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL  GYHQLRIRDGDIPKT+
Sbjct: 179 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 238

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF VISFGLTNA  VFMDLMN+VFKDFLD+F+IVFIDDIL+YS +  +++
Sbjct: 239 FRSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE 296

[Close]

BLAST of Cmc08g0221741 vs. ExPASy TrEMBL
Match: A0A5A7UPE4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold431G00120 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.4e-48
Identity = 92/118 (77.97%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTS 60
           MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKI L LGYHQLRI+DGD+PKT+
Sbjct: 441 MCLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIYLRLGYHQLRIKDGDVPKTA 500

Query: 61  FRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFIDDILVYSNSTLDYK 119
           FRS+YG+YEF V+SFGLTNA  VFMDLMN+VF++FLDTF+IVFIDDIL+YS + ++++
Sbjct: 501 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHE 558

The following BLAST results are available for this feature:

BLAST of Cmc08g0221741 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054634.1	1.2e-48	80.51	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066274.1	1.0e-47	77.97	pol protein [Cucumis melo var. makuwa]	[more]
TYK08914.1	1.0e-47	80.51	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	1.3e-47	80.51	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056186.1	1.3e-47	77.97	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0221741 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	5.2e-31	54.13	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	1.7e-21	44.14	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.7e-21	44.14	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	3.2e-20	37.10	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.6e-19	36.28	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]

BLAST of Cmc08g0221741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHL7	5.7e-49	80.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24...	[more]
A0A5A7VG41	4.9e-48	77.97	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003230 PE...	[more]
A0A5D3CCF4	4.9e-48	80.51	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold61802G00010 ...	[more]
A0A5A7TVN9	6.4e-48	80.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7UPE4	6.4e-48	77.97	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc08g0221741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 2..115 e-value: 1.9E-14 score: 53.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..126 e-value: 1.8E-43 score: 150.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 3..79 e-value: 1.8E-43 score: 150.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 4..114
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 4..114
None	No IPR available	CDD	cd01647	RT_LTR	coord: 3..113 e-value: 1.41372E-49 score: 154.29
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0221741.1	Cmc08g0221741.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding