Cmc08g0221661 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0221661
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 9550018 .. 9551551 (+)
RNA-Seq Expression	Cmc08g0221661
Synteny	Cmc08g0221661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACAATTGTGAGATACTGTATCATCCAGACAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCGGTTAGCCCAGTTGAAGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGCGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGATTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGACACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGTCGAGAACTCTGAGTGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGTACATCTGTACATGTCTGAGATAGTGAAATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGAAATTTGCTTATAATCACAGTTATCAGGCTACTATTGGCATGGCACCATTCGAGGCCTTGTACGGAAAGTGTTGCAGATCCCCTGTTTGCTGGGGTGAGGTGGGTAAGCAGAGATTGATGGGTCCTGAGTTAATTCAGTCTACTAACGAAGTGATCCAGAAAATTAGATCACGTATGCAGACCGCACAGAGTAGGCAGAAGAGTTATGCTGATGTTAGACGAAAGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGAAAGCTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCTCTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTACCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGA

mRNA sequence

ATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACAATTGTGAGATACTGTATCATCCAGACAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCGGTTAGCCCAGTTGAAGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGCGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGATTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGACACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGTCGAGAACTCTGAGTGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGTACATCTGTACATGTCTGAGATAGTGAAATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGAAATTTGCTTATAATCACAGTTATCAGGCTACTATTGGCATGGCACCATTCGAGGCCTTGTACGGAAAGTGTTGCAGATCCCCTGTTTGCTGGGGTGAGGTGGGTAAGCAGAGATTGATGGGTCCTGAGTTAATTCAGTCTACTAACGAAGTGATCCAGAAAATTAGATCACGTATGCAGACCGCACAGAGTAGGCAGAAGAGTTATGCTGATGTTAGACGAAAGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGAAAGCTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCTCTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTGA

Coding sequence (CDS)

ATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACAATTGTGAGATACTGTATCATCCAGACAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCGGTTAGCCCAGTTGAAGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGCGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGATTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGACACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGTCGAGAACTCTGAGTGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGTACATCTGTACATGTCTGAGATAGTGAAATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGAAATTTGCTTATAATCACAGTTATCAGGCTACTATTGGCATGGCACCATTCGAGGCCTTGTACGGAAAGTGTTGCAGATCCCCTGTTTGCTGGGGTGAGGTGGGTAAGCAGAGATTGATGGGTCCTGAGTTAATTCAGTCTACTAACGAAGTGATCCAGAAAATTAGATCACGTATGCAGACCGCACAGAGTAGGCAGAAGAGTTATGCTGATGTTAGACGAAAGGATCTTGAGTTTGATGTGGGGGACAAGGTGTTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGAAAGCTGAGTCCCCGTTTTGTTGGGCCATTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCTCTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTGA

Protein sequence

MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVSVGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQVKTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKSTYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSPVCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

Homology

[Close]

BLAST of Cmc08g0221661 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 925.2 bits (2390), Expect = 2.2e-265
Identity = 452/477 (94.76%), Postives = 466/477 (97.69%), Query Frame = 0


Query: 1    MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
            MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVTM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
            K PRQKPAGLLQPLSIPEWKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALYG+CCRSP
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
            VCWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF++GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
            VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1373

[Close]

BLAST of Cmc08g0221661 vs. NCBI nr
Match: KAA0047043.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 919.5 bits (2375), Expect = 1.2e-263
Identity = 451/477 (94.55%), Postives = 464/477 (97.27%), Query Frame = 0


Query: 1   MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
           MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVS 60

Query: 61  VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVT++LA L VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 61  VGAVTIQLAHLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 120

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSRCLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180

Query: 181 KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
           K PRQKPAGLLQPLSIPEWKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
           VCWGEVG+QRLMGPEL+QS NE IQKIRSRM TAQSRQKSYADVRR DLEF+VGDKVFLK
Sbjct: 361 VCWGEVGEQRLMGPELVQSINEAIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLK 420

Query: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
           VAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 477

[Close]

BLAST of Cmc08g0221661 vs. NCBI nr
Match: KAA0040699.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 919.1 bits (2374), Expect = 1.6e-263
Identity = 449/477 (94.13%), Postives = 466/477 (97.69%), Query Frame = 0


Query: 1    MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
            MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 1050 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1109

Query: 61   VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGA+TM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1110 VGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1169

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
            CVP DSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR+YWWRNMKR+VAEFVSRCLVCQQV
Sbjct: 1170 CVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQV 1229

Query: 181  KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
            K PRQKPAGLLQPLSIP+WKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1230 KAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1289

Query: 241  TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTD
Sbjct: 1290 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTD 1349

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALYGKCCRSP
Sbjct: 1350 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1409

Query: 361  VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
            VCWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF+VGDKVFLK
Sbjct: 1410 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1469

Query: 421  VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
            VAPM+GVLRFERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Sbjct: 1470 VAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK 1526

[Close]

BLAST of Cmc08g0221661 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.7 bits (2373), Expect = 2.1e-263
Identity = 449/477 (94.13%), Postives = 465/477 (97.48%), Query Frame = 0


Query: 1   MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
           MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 468 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 527

Query: 61  VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVTM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 528 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 587

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVS+CLVCQQV
Sbjct: 588 CVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQV 647

Query: 181 KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
           K PRQKPAGLLQPLSIPEWKWENVSMDFI GL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 648 KAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 707

Query: 241 TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYT SKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 708 TYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 767

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
           GQTERLN+VLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALY KCCRSP
Sbjct: 768 GQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSP 827

Query: 361 VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
           +CWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF+VGDKVFLK
Sbjct: 828 ICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 887

Query: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
           VAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 888 VAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 944

[Close]

BLAST of Cmc08g0221661 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 917.9 bits (2371), Expect = 3.5e-263
Identity = 449/477 (94.13%), Postives = 464/477 (97.27%), Query Frame = 0


Query: 1    MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
            MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 950  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1009

Query: 61   VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVTM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1010 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1069

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KR+YWWRNMKREVAEFVSRCLVCQQV
Sbjct: 1070 CVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQV 1129

Query: 181  KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
            K PRQKPAGLLQPLSIPEWKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1130 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1189

Query: 241  TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTD
Sbjct: 1190 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTD 1249

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLE MLRACALEFPGSWDSHLHLM+F YN+SYQATIGMAPFEALYGKCCRSP
Sbjct: 1250 GQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCCRSP 1309

Query: 361  VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
            VCWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF+VGDKVFLK
Sbjct: 1310 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1369

Query: 421  VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
            VAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1370 VAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1426

[Close]

BLAST of Cmc08g0221661 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-62
Identity = 152/481 (31.60%), Postives = 243/481 (50.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVSV 61
            R  RW   ++D+N EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+ +    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT L  + SG+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA +   ++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YN++  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDL-EFDVGDKV 421
            SP+   E+        E  Q T +V Q ++  + T   + K Y D++ +++ EF  GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 478
             +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1256

[Close]

BLAST of Cmc08g0221661 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-62
Identity = 152/481 (31.60%), Postives = 243/481 (50.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVSV 61
            R  RW   ++D+N EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+ +    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT L  + SG+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA +   ++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YN++  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDL-EFDVGDKV 421
            SP+   E+        E  Q T +V Q ++  + T   + K Y D++ +++ EF  GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 478
             +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1256

[Close]

BLAST of Cmc08g0221661 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-62
Identity = 152/481 (31.60%), Postives = 243/481 (50.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVSV 61
            R  RW   ++D+N EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+ +    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT L  + SG+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA +   ++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YN++  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDL-EFDVGDKV 421
            SP+   E+        E  Q T +V Q ++  + T   + K Y D++ +++ EF  GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 478
             +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1256

[Close]

BLAST of Cmc08g0221661 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-62
Identity = 152/481 (31.60%), Postives = 243/481 (50.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVSV 61
            R  RW   ++D+N EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+ +    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT L  + SG+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA +   ++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YN++  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDL-EFDVGDKV 421
            SP+   E+        E  Q T +V Q ++  + T   + K Y D++ +++ EF  GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 478
             +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1256

[Close]

BLAST of Cmc08g0221661 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-62
Identity = 152/481 (31.60%), Postives = 243/481 (50.52%), Query Frame = 0


Query: 2    RQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVSV 61
            R  RW   ++D+N EI Y P  AN +ADALSR       ++    P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR-- 121
                  + Q+ +    + +++   +ND  L+    L    + VE +I    GLL   +  
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQ 181
            + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGK 241
             K+   KP G LQP+   E  WE++SMDFIT L  + SG+  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT 301
             + TA +   ++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYG-KCCR 361
            DGQTER NQ +E +LR      P +W  H+ L++ +YN++  +   M PFE ++      
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1159

Query: 362  SPVCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDL-EFDVGDKV 421
            SP+   E+        E  Q T +V Q ++  + T   + K Y D++ +++ EF  GD V
Sbjct: 1160 SPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLV 1219

Query: 422  FLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR 478
             +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Sbjct: 1220 MVK-RTKTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1256

[Close]

BLAST of Cmc08g0221661 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 925.2 bits (2390), Expect = 1.1e-265
Identity = 452/477 (94.76%), Postives = 466/477 (97.69%), Query Frame = 0


Query: 1    MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
            MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVTM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
            K PRQKPAGLLQPLSIPEWKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALYG+CCRSP
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
            VCWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF++GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
            VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1373

[Close]

BLAST of Cmc08g0221661 vs. ExPASy TrEMBL
Match: A0A5A7TU00 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE=4 SV=1)

HSP 1 Score: 919.5 bits (2375), Expect = 5.9e-264
Identity = 451/477 (94.55%), Postives = 464/477 (97.27%), Query Frame = 0


Query: 1   MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
           MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIVVS 60

Query: 61  VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVT++LA L VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 61  VGAVTIQLAHLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 120

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSRCLVCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 180

Query: 181 KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
           K PRQKPAGLLQPLSIPEWKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
           GQTERLNQVLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALYGKCCRSP
Sbjct: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360

Query: 361 VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
           VCWGEVG+QRLMGPEL+QS NE IQKIRSRM TAQSRQKSYADVRR DLEF+VGDKVFLK
Sbjct: 361 VCWGEVGEQRLMGPELVQSINEAIQKIRSRMHTAQSRQKSYADVRRIDLEFEVGDKVFLK 420

Query: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
           VAPM+GVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 421 VAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 477

[Close]

BLAST of Cmc08g0221661 vs. ExPASy TrEMBL
Match: A0A5A7THF3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00140 PE=4 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 7.7e-264
Identity = 449/477 (94.13%), Postives = 466/477 (97.69%), Query Frame = 0


Query: 1    MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
            MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 1050 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1109

Query: 61   VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGA+TM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1110 VGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1169

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
            CVP DSAVKTELLSEAHSSPFSMHPGSTKMYQDLKR+YWWRNMKR+VAEFVSRCLVCQQV
Sbjct: 1170 CVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQV 1229

Query: 181  KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
            K PRQKPAGLLQPLSIP+WKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1230 KAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1289

Query: 241  TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTD
Sbjct: 1290 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTD 1349

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALYGKCCRSP
Sbjct: 1350 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1409

Query: 361  VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
            VCWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF+VGDKVFLK
Sbjct: 1410 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1469

Query: 421  VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
            VAPM+GVLRFERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Sbjct: 1470 VAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK 1526

[Close]

BLAST of Cmc08g0221661 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.0e-263
Identity = 449/477 (94.13%), Postives = 465/477 (97.48%), Query Frame = 0


Query: 1   MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
           MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 468 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 527

Query: 61  VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
           VGAVTM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 528 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 587

Query: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
           CVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVS+CLVCQQV
Sbjct: 588 CVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKCLVCQQV 647

Query: 181 KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
           K PRQKPAGLLQPLSIPEWKWENVSMDFI GL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 648 KAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 707

Query: 241 TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
           TYT SKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD
Sbjct: 708 TYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 767

Query: 301 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
           GQTERLN+VLEDMLRACALEFPGSWDSHLHLM+FAYN+SYQATIGMAPFEALY KCCRSP
Sbjct: 768 GQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYDKCCRSP 827

Query: 361 VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
           +CWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF+VGDKVFLK
Sbjct: 828 ICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 887

Query: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
           VAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 888 VAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 944

[Close]

BLAST of Cmc08g0221661 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 1.7e-263
Identity = 449/477 (94.13%), Postives = 464/477 (97.27%), Query Frame = 0


Query: 1    MRQRRWLELVKDYNCEILYHPDKANVVADALSRKVSHSAALITRQAPLHQDLERAEIAVS 60
            MRQRRWLELVKDY+CEILYHP KANVVADALSRKVSHSAALITRQAPLH+DLERAEIAVS
Sbjct: 950  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1009

Query: 61   VGAVTMRLAQLKVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 120
            VGAVTM+LAQL VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRL
Sbjct: 1010 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRL 1069

Query: 121  CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSRCLVCQQV 180
            CVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KR+YWWRNMKREVAEFVSRCLVCQQV
Sbjct: 1070 CVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQV 1129

Query: 181  KTPRQKPAGLLQPLSIPEWKWENVSMDFITGLSRTLSGFTVIWVVVDRLTKSAHFVPGKS 240
            K PRQKPAGLLQPLSIPEWKWENVSMDFITGL RTL GFTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1130 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1189

Query: 241  TYTASKWVHLYMSEIVKLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300
            TYTASKW  LYMSEIV+LHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTD
Sbjct: 1190 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAFHPQTD 1249

Query: 301  GQTERLNQVLEDMLRACALEFPGSWDSHLHLMKFAYNHSYQATIGMAPFEALYGKCCRSP 360
            GQTERLNQVLE MLRACALEFPGSWDSHLHLM+F YN+SYQATIGMAPFEALYGKCCRSP
Sbjct: 1250 GQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFEALYGKCCRSP 1309

Query: 361  VCWGEVGKQRLMGPELIQSTNEVIQKIRSRMQTAQSRQKSYADVRRKDLEFDVGDKVFLK 420
            VCWGEVG+QRLMGPEL+QSTNE IQKIRSRM TAQSRQKSYADVRRKDLEF+VGDKVFLK
Sbjct: 1310 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 1369

Query: 421  VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 478
            VAPM+GVLRFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Sbjct: 1370 VAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1426

The following BLAST results are available for this feature:

BLAST of Cmc08g0221661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051368.1	2.2e-265	94.76	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047043.1	1.2e-263	94.55	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040699.1	1.6e-263	94.13	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	2.1e-263	94.13	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	3.5e-263	94.13	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0221661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.9e-62	31.60	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.9e-62	31.60	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.9e-62	31.60	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.9e-62	31.60	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.9e-62	31.60	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0221661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7V9	1.1e-265	94.76	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7TU00	5.9e-264	94.55	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE...	[more]
A0A5A7THF3	7.7e-264	94.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5A7UP94	1.0e-263	94.13	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7U330	1.7e-263	94.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Cmc08g0221661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 377..397
None	No IPR available	GENE3D	1.10.340.70		coord: 91..181 e-value: 3.5E-18 score: 67.6
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 118..400
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 190..398 e-value: 1.8E-44 score: 153.4
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 126..182 e-value: 2.1E-17 score: 62.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 193..356 score: 18.164782
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 194..353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0221661.1	Cmc08g0221661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding