Cmc08g0221651 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0221651
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 9548912 .. 9549862 (+)
RNA-Seq Expression	Cmc08g0221651
Synteny	Cmc08g0221651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCAGCAGAGTTGAAAGAACTAAAAGTGCAGTTACAGGAATTGCTCGATAAGGGATTCATTCGACCGAGTGTGTCACCTTGGGGTGCATCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCTTAGACATTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGACGCCGATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGCGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAACAGGTGTCCTTTCTAGACCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAATTGGACCCGACCTTCCACAGTTAGTGAGGTTCGTAGCTTCCTGGGCTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAACTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGCTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGAGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTCGCTATACTTCTCGTCAGTTGA

mRNA sequence

ATGGCCCCAGCAGAGTTGAAAGAACTAAAAGTGCAGTTACAGGAATTGCTCGATAAGGGATTCATTCGACCGAGTGTGTCACCTTGGGGTGCATCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCTTAGACATTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGACGCCGATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGCGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAACAGGTGTCCTTTCTAGACCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAATTGGACCCGACCTTCCACAGTTAGTGAGGTTCGTAGCTTCCTGGGCTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAACTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGCTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGAGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTCGCTATACTTCTCGTCAGTTGA

Coding sequence (CDS)

ATGGCCCCAGCAGAGTTGAAAGAACTAAAAGTGCAGTTACAGGAATTGCTCGATAAGGGATTCATTCGACCGAGTGTGTCACCTTGGGGTGCATCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCTTAGACATTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGACGCCGATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGCGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAACAGGTGTCCTTTCTAGACCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAATTGGACCCGACCTTCCACAGTTAGTGAGGTTCGTAGCTTCCTGGGCTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAACTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGCTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGAGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTCGCTATACTTCTCGTCAGTTGA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDADEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAILLVS

Homology

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BLAST of Cmc08g0221651 vs. NCBI nr
Match: KAA0047433.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 602.8 bits (1553), Expect = 1.7e-168
Identity = 301/312 (96.47%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 1063 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1122

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 1123 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 1182

Query: 121  NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLR+VLQTLRDNKLYAKFS
Sbjct: 1183 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 1242

Query: 181  KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1243 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1302

Query: 241  SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1303 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1362

Query: 301  SCVLMQQGKVVA 312
             CVLMQQGKVVA
Sbjct: 1363 GCVLMQQGKVVA 1374

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BLAST of Cmc08g0221651 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 601.3 bits (1549), Expect = 4.9e-168
Identity = 301/312 (96.47%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 SCVLMQQGKVVA 312
            CVLMQQGKVVA
Sbjct: 880 GCVLMQQGKVVA 891

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BLAST of Cmc08g0221651 vs. NCBI nr
Match: KAA0051051.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 601.3 bits (1549), Expect = 4.9e-168
Identity = 300/312 (96.15%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 707  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 766

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK+GDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 767  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKEGDVPKTAFRSRYGHYEFIVMSFGLT 826

Query: 121  NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLR+VLQTLRDNKLYAKFS
Sbjct: 827  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 886

Query: 181  KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 887  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 946

Query: 241  SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 947  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1006

Query: 301  SCVLMQQGKVVA 312
             CVLMQQGKVVA
Sbjct: 1007 GCVLMQQGKVVA 1018

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BLAST of Cmc08g0221651 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 599.0 bits (1543), Expect = 2.4e-167
Identity = 300/312 (96.15%), Postives = 302/312 (96.79%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRI TPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  SCVLMQQGKVVA 312
             CVLMQQGKVVA
Sbjct: 1134 GCVLMQQGKVVA 1145

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BLAST of Cmc08g0221651 vs. NCBI nr
Match: KAA0026271.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 598.2 bits (1541), Expect = 4.1e-167
Identity = 299/312 (95.83%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQ+LLDKGFIR SVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 149 MAPAELKELKVQLQKLLDKGFIRSSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 208

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 209 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 268

Query: 121 NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLR+VLQTLRDNKLYAKFS
Sbjct: 269 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 328

Query: 181 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 329 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 388

Query: 241 SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 389 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 448

Query: 301 SCVLMQQGKVVA 312
            CVLMQQGKVVA
Sbjct: 449 GCVLMQQGKVVA 460

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BLAST of Cmc08g0221651 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.6e-60
Identity = 114/313 (36.42%), Postives = 188/313 (60.06%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPSVSPWGASVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+QE+L++G IR S SP+ +    V KK         R+ IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF ++ GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDADE-EHLRMVLQTLRDNKLYAKFSKC 187
           PA F   MN + R  L+   +V++DDI+I+S +  +    +++V   L D  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENFSR 247
           EF  K+ +FL H+V+  G+  +P K++A+ ++  P+   E+R+FLGL GYYR+F+ N++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 ITTPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLS 307
           I  P+T   +K       K    ++F+ LK  ++  P+L +PD    FV+ +DAS   L 
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAIL 314
            VL Q G  ++ +
Sbjct: 521 AVLSQNGHPISFI 533

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BLAST of Cmc08g0221651 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.0e-59
Identity = 120/309 (38.83%), Postives = 190/309 (61.49%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGASVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 66
           +E++ Q+Q++L++G IR S SP+ + +  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDADE--EHLRMVLQTLRDNKLYAKFS 186
           APA F   MN + R  L+   +V++DDI+++S T  DE  + L +V + L    L  +  
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFS-TSLDEHLQSLGLVFEKLAKANLKLQLD 400

Query: 187 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 246
           KCEF  ++ +FL HV++  G+  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF
Sbjct: 401 KCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNF 460

Query: 247 SRITTPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKG 306
           + I  P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + +DAS   
Sbjct: 461 ADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVA 520

Query: 307 LSCVLMQQG 308
           L  VL Q G
Sbjct: 521 LGAVLSQDG 528

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BLAST of Cmc08g0221651 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-57
Identity = 111/307 (36.16%), Postives = 185/307 (60.26%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +     V+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDADE-EHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  +  V+ ++DDILI+SK++++  +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+ + +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++T PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 SCVLMQQ 307
             VL Q+
Sbjct: 720 GAVLSQK 726

[Close]

BLAST of Cmc08g0221651 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-57
Identity = 111/307 (36.16%), Postives = 185/307 (60.26%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +     V+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDADE-EHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  +  V+ ++DDILI+SK++++  +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+ + +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++T PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 SCVLMQQ 307
             VL Q+
Sbjct: 720 GAVLSQK 726

[Close]

BLAST of Cmc08g0221651 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-57
Identity = 111/307 (36.16%), Postives = 185/307 (60.26%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +     V+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDADE-EHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  +  V+ ++DDILI+SK++++  +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+ + +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++T PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 SCVLMQQ 307
             VL Q+
Sbjct: 720 GAVLSQK 726

[Close]

BLAST of Cmc08g0221651 vs. ExPASy TrEMBL
Match: A0A5A7TV57 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00240 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 8.1e-169
Identity = 301/312 (96.47%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 1063 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1122

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 1123 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 1182

Query: 121  NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLR+VLQTLRDNKLYAKFS
Sbjct: 1183 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 1242

Query: 181  KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1243 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1302

Query: 241  SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1303 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1362

Query: 301  SCVLMQQGKVVA 312
             CVLMQQGKVVA
Sbjct: 1363 GCVLMQQGKVVA 1374

[Close]

BLAST of Cmc08g0221651 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.4e-168
Identity = 301/312 (96.47%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 SCVLMQQGKVVA 312
            CVLMQQGKVVA
Sbjct: 880 GCVLMQQGKVVA 891

[Close]

BLAST of Cmc08g0221651 vs. ExPASy TrEMBL
Match: A0A5A7UC07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00040 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.4e-168
Identity = 300/312 (96.15%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 707  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 766

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK+GDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 767  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKEGDVPKTAFRSRYGHYEFIVMSFGLT 826

Query: 121  NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLR+VLQTLRDNKLYAKFS
Sbjct: 827  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 886

Query: 181  KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 887  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 946

Query: 241  SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 947  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1006

Query: 301  SCVLMQQGKVVA 312
             CVLMQQGKVVA
Sbjct: 1007 GCVLMQQGKVVA 1018

[Close]

BLAST of Cmc08g0221651 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.2e-167
Identity = 300/312 (96.15%), Postives = 302/312 (96.79%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRI TPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  SCVLMQQGKVVA 312
             CVLMQQGKVVA
Sbjct: 1134 GCVLMQQGKVVA 1145

[Close]

BLAST of Cmc08g0221651 vs. ExPASy TrEMBL
Match: A0A5A7SPZ2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE=4 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 2.0e-167
Identity = 299/312 (95.83%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQ+LLDKGFIR SVSPWGA VLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 149 MAPAELKELKVQLQKLLDKGFIRSSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 208

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 209 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 268

Query: 121 NAPAVFMDLMNRVFREFLDIFVIVFIDDILIYSKTDAD-EEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLD FVIVFIDDILIYSKT+A+ EEHLR+VLQTLRDNKLYAKFS
Sbjct: 269 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 328

Query: 181 KCEFWLKQVSFLDHVVSKAGVSVDPTKIEAVTNWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFL HVVSKAGVSVDP KIEAVT WTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 329 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 388

Query: 241 SRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRI TPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 389 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 448

Query: 301 SCVLMQQGKVVA 312
            CVLMQQGKVVA
Sbjct: 449 GCVLMQQGKVVA 460

[Close]

BLAST of Cmc08g0221651 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.6e-26
Identity = 60/148 (40.54%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 161 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLD--HVVSKAGVSVDPTKIEAVTNWTRPST 220
           HL MVLQ    ++ YA   KC F   Q+++L   H++S  GVS DP K+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 221 VSEVRSFLGLAGYYRRFVENFSRITTPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 280
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 281 LTVPDGSGSFVIYSDASKKGLSCVLMQQ 307
           L +PD    FV  +   K   SC + ++
Sbjct: 123 LALPDLKLPFV--TRVGKWNWSCFITRE 147

The following BLAST results are available for this feature:

BLAST of Cmc08g0221651 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047433.1	1.7e-168	96.47	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	4.9e-168	96.47	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051051.1	4.9e-168	96.15	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01613.1	2.4e-167	96.15	pol protein [Cucumis melo var. makuwa]	[more]
KAA0026271.1	4.1e-167	95.83	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0221651 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	4.6e-60	36.42	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.0e-59	38.83	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P0CT41	1.2e-57	36.16	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-57	36.16	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.2e-57	36.16	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0221651 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TV57	8.1e-169	96.47	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7U330	2.4e-168	96.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7UC07	2.4e-168	96.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3BPI1	1.2e-167	96.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7SPZ2	2.0e-167	95.83	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE...	[more]

BLAST of Cmc08g0221651 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.6e-26	40.54	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 258..308 e-value: 2.2E-13 score: 50.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..195 e-value: 2.5E-81 score: 274.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 205..296 e-value: 6.4E-32 score: 111.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..191 e-value: 5.4E-25 score: 88.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..230 score: 8.916615
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 2.5E-81 score: 274.0
None	No IPR available	PANTHER	PTHR24559:SF363	SUBFAMILY NOT NAMED	coord: 2..289
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..289
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..195 e-value: 5.14014E-93 score: 272.161
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0221651.1	Cmc08g0221651.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding