Cmc08g0220511 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0220511
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	60S acidic ribosomal protein P2-like
Location	CMiso1.1chr08: 8437334 .. 8439969 (+)
RNA-Seq Expression	Cmc08g0220511
Synteny	Cmc08g0220511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTACACCCTCTTCTCTGTTCTTCCCCATTTTTCTTCTTCCCTTCTCATCTCTCTTTCTCTCTGATTTCTTTTCTTTTCAGAAGAAGAATCATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCATCTGCTCAAGATATCAACACCATTCTCTACTCTGGTTCTTTCTTTTTCTTTTTTTCTTTTTTATTTATTTTTTTTAATCTCTTTCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTTTTGTGATTTTCTCCATCCATCCAATAACTTTCAAGAATCTGGTTTTAAAGCCAAGAAAATGGAACTTATATGGGTTTCTAGATATGCTTCCAAACTTCATATTCCACCTATACTTATATATATAAAAATGAACTATATATGAACATTTTCACAGCTAACCCTTCTAGGTTTCCATAAGTTGTTTTTCTGATATTAGTGGGGTTTTTTTTTTTTTTTTTTTGCTGGGTTAGTTTAAAAACTTGTGGAAGTGTTGATTCAAATTTTTTATGTTTTGGTTGAAGATATAATAGTTTAGTTATGGTGATTAATCTAGACTTTAACAGCTCCAACGTGCTAGGGTTTCACAAGAAGCTGATTATTTTCTGGGGCTGTAGCTCCTTATATTCCCTCTCGGTCTCGCTCTTACTTTTTTCTCCCCAACGACTTCAGTTCGAGAAAGAAAATGTGGAGAGCAAGAGAGGTAAATGGAGAGAAATGCTTAAACACCAAAGAGGGGGAAATATAGAGAGCCAAAGCTATAGGACTAAAAGGAAGAATACCAAATATGAATAAAGGTTTTTGCTCTTTTCTTTTTTCCTTTTTTTGAGAAATTTAGTAATATTTTATTTGGACATAATTTTTTTTTTAGGTCTTTCATACAAAAAAAAAAAGAAAGAAAGAAAGATAATAGTAAATCTATGAGGGTTGCTGTTCAAACTAAAATGCTTGGATTTTTATTAGTTGATTTCTTTTTCCTGAAATGACCCTAAATGAAAACAGTAGAGAATATAATTTTTTTTCTAGTTAAATGTGCCATGCTTTTGCTTTCTATTTTGAAAGACCTTGACGGATGATTATCATTAACCTAAATTCCTTTTTTATTGTATAAATTGTTTTGGGGTTCTTGTTTCTATAAAATCATCTGTTTTCCTTTATATAATTCTCATGAAGTCTACTTTCTTTAACCAAAAAAAAAAAAAAAAACTTGTGTTCGGTTGTTTTTTTTCTTAATTAATATTTTGATATAAAACACACTACACAATAAATTTTCTTTGTTGCTTAAGTTTTTTAGAACTGATTTAAGAATACCAAAGTTTTAAATGAAGAAAAATAACTAACTTGAACAGACATTCTGAAATTTCATTATTTCTTTACATTTTGTCACATGCAGTTTTAAGTTTTAGGTCCCTTGAAAAAATGATTTATCACTATCTGTTTCTTCGGCTTTTTTGTGACAAGACACAAATCGACTAAAACACAGACACCATTTGGTTGACCTGACAGGATCTAAACCAACTGACTAGAATTAAAGAACTCATTTGGTTCTGTCCATTTTGGTTTCCTTTTTATTACCCTTAGCTCAAAATCGTTGTTTGTTGGACAGGACAACTCATGACTTGTGAGAGACTTGCCTCCAACTATTTCTATACATATAAAAATTTTATGCATCACAACCACAGACCAACTAACGATAGAAAAAGTTTACTATATCTGTGAAAATGTTTGTATCAGATAGGTCCTTAAACCAAACTTTTAATTTTGTACCATCAATTTCTAGGTACCTTCATCATTAAACTTTCAACTTCATGTCAAATGATTTTGTAAATTGAAAAATATAGAATAGGTGGAGTATATTGGACACAAAGTTGGAAGTTGCACACGGTAAAATTTAGGGATGTATTTGTGGTAAGAATTTAAACTGGTAATTTTTAGCTAAATTTAATTGATGATGCCTTTTGATAGTCAATGGTTAACATTTGCACAGTTGGAGCTGAAGCTGATGTTGAAAAGATTGAGCTGCTTCTTGCTGAAGTTAAGGGCAAGGATATAACTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCCTTACCTACCGGTGCCGTCGTTGCAGCTGTTGTGGCTGCAGTCCCCTCTACTGTCGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCTGATGAAGTAAATTACTTTTCCCTTCAACAACTTTGGATTGGTTGTTAGAATATTGACTTTGTTTTCTTATGTGTGTTACAGGACATTTGCTTCTCCCTGTTTGAAGACGAGTAAGGAATTGGGCGCTTCCTTATAGTTTCCCTTGGAATTAGGCTTCTAATGGCTTTGTTTTGTTGAAGAAAATCAACTTTATTCTCTGTTGCTAGTGGTGGTTGAAATTATCACTCTTTCTTGGATTGATGATCAATTTGCTTTGAGGAGCAAGAAAACAAACTTTTAATCCTGACTGTCTGATTACCTAGTTGATATATATTTTGCTATTTCTCTTACTTTTTTTTTCAATCTTCTCCTACCTTCTTGATTATTTTACTTGAGATGATTAGGAAAATGGAATCATGAAACCTG

mRNA sequence

GTTACACCCTCTTCTCTGTTCTTCCCCATTTTTCTTCTTCCCTTCTCATCTCTCTTTCTCTCTGATTTCTTTTCTTTTCAGAAGAAGAATCATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCATCTGCTCAAGATATCAACACCATTCTCTACTCTGTTCGAGAAAGAAAATGTGGAGAGCAAGAGAGGTAAATGGAGAGAAATGCTTAAACACCAAAGAGGGGGAAATATAGAGAGCCAAAGCTATAGGACTAAAAGGAAGAATACCAAATATGAATAAAGTTGGAGCTGAAGCTGATGTTGAAAAGATTGAGCTGCTTCTTGCTGAAGTTAAGGGCAAGGATATAACTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCCTTACCTACCGGTGCCGTCGTTGCAGCTGTTGTGGCTGCAGTCCCCTCTACTGTCGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCTGATGAAGACATTTGCTTCTCCCTGTTTGAAGACGAGTAAGGAATTGGGCGCTTCCTTATAGTTTCCCTTGGAATTAGGCTTCTAATGGCTTTGTTTTGTTGAAGAAAATCAACTTTATTCTCTGTTGCTAGTGGTGGTTGAAATTATCACTCTTTCTTGGATTGATGATCAATTTGCTTTGAGGAGCAAGAAAACAAACTTTTAATCCTGACTGTCTGATTACCTAGTTGATATATATTTTGCTATTTCTCTTACTTTTTTTTTCAATCTTCTCCTACCTTCTTGATTATTTTACTTGAGATGATTAGGAAAATGGAATCATGAAACCTG

Coding sequence (CDS)

ATGAATAAAGTTGGAGCTGAAGCTGATGTTGAAAAGATTGAGCTGCTTCTTGCTGAAGTTAAGGGCAAGGATATAACTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCCTTACCTACCGGTGCCGTCGTTGCAGCTGTTGTGGCTGCAGTCCCCTCTACTGTCGATGCTGCTGCTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGATGATGCTATGGACTCTGATGAAGACATTTGCTTCTCCCTGTTTGAAGACGAGTAA

Protein sequence

MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVAAEAKKEEKDDAMDSDEDICFSLFEDE

Homology

[Close]

BLAST of Cmc08g0220511 vs. NCBI nr
Match: KAA0025275.1 (60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa] >TYK07392.1 60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 4  VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
          VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA
Sbjct: 7  VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 66

Query: 64 AEAKKEEKDDAMDSDEDICFSLFEDE 90
          AEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 67 AEAKKEEKDDAMDSDEDICFSLFEDE 92

[Close]

BLAST of Cmc08g0220511 vs. NCBI nr
Match: XP_016902906.1 (PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 4   VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
           VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA
Sbjct: 30  VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 89

Query: 64  AEAKKEEKDDAMDSDEDICFSLFEDE 90
           AEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 90  AEAKKEEKDDAMDSDEDICFSLFEDE 115

[Close]

BLAST of Cmc08g0220511 vs. NCBI nr
Match: XP_004143377.1 (60S acidic ribosomal protein P2 [Cucumis sativus] >XP_031743701.1 60S acidic ribosomal protein P2 [Cucumis sativus] >KGN48245.1 hypothetical protein Csa_002919 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-29
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           ++ VGAEA+VEKIELL+AE+KGKDITELIA  REKMASLPTGAVVAA VAAVPSTVD AA
Sbjct: 48  LSSVGAEAEVEKIELLIAELKGKDITELIAYAREKMASLPTGAVVAAAVAAVPSTVDTAA 107

Query: 61  PVAAEAKKEEKDDAMDSDEDICFSLFEDE 90
           PV AEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 108 PVGAEAKKEEKDDAMDSDEDICFSLFEDE 136

[Close]

BLAST of Cmc08g0220511 vs. NCBI nr
Match: KAF7804322.1 (60S acidic ribosomal protein P2-like [Senna tora])

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15
Identity = 56/88 (63.64%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           +  VGAEAD +KIELLL+EVKGKDITELIA GREK+AS+P G   A  VAA P    AAA
Sbjct: 27  LGSVGAEADSDKIELLLSEVKGKDITELIAAGREKLASVPCGGGGAVAVAAAPGGGGAAA 86

Query: 61  PVAAEAKKEEK-DDAMDSDEDICFSLFE 88
           P AAE KKEEK ++  +SD+D+ FSLF+
Sbjct: 87  PAAAEPKKEEKVEEKEESDDDMGFSLFD 114

[Close]

BLAST of Cmc08g0220511 vs. NCBI nr
Match: XP_017620362.1 (PREDICTED: 60S acidic ribosomal protein P2A-like [Gossypium arboreum])

HSP 1 Score: 90.9 bits (224), Expect = 6.0e-15
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           +  VGAEA+ E+I+LLL+EVKGKDITELIA GREK+AS+P+G    AV AA P    AAA
Sbjct: 27  LGSVGAEAEDERIQLLLSEVKGKDITELIASGREKLASVPSGGGGVAVAAAAPGAGAAAA 86

Query: 61  PVAAEAKKEEK-DDAMDSDEDICFSLFE 88
           P AAEAKKEEK ++  +SD+D+ FSLF+
Sbjct: 87  PAAAEAKKEEKAEEKEESDDDMGFSLFD 114

[Close]

BLAST of Cmc08g0220511 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 51/85 (60.00%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 4   VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
           VGA+AD +KIELLL++VKGKDITELIA GRE++AS+P+G  VA   AA     DA A  A
Sbjct: 30  VGADADDDKIELLLSQVKGKDITELIASGRERLASVPSGGGVAVAAAAGGGGGDAPAAAA 89

Query: 64  AEAKKEEKDDAMDSDEDICFSLFED 89
            E KKEEK +  +SDE++ FSLF+D
Sbjct: 90  EEPKKEEKSEE-ESDEELGFSLFDD 113

[Close]

BLAST of Cmc08g0220511 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-13
Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           +  VG E D EK+ELLL+++ GKDITELIA GREK AS+P G    AV AA P+    AA
Sbjct: 27  LESVGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPCGGGGVAVAAAAPA-AGGAA 86

Query: 61  PVAAEAKKEEK-DDAMDSDEDICFSLFE 88
           P AAEAKKEEK ++  +SD+D+ FSLF+
Sbjct: 87  P-AAEAKKEEKVEEKEESDDDMGFSLFD 112

[Close]

BLAST of Cmc08g0220511 vs. ExPASy Swiss-Prot
Match: Q9LXM8 (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-13
Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 4   VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
           VGA+ D E IELLL EV GKDI ELIA GREK+AS+P+G  VA  V+A PS+    A   
Sbjct: 30  VGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVA--VSAAPSSGGGGAAAP 89

Query: 64  AEAKKEEKDDAMDSDEDICFSLFE 88
           AE K+ +K++  +SD+D+ FSLFE
Sbjct: 90  AEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of Cmc08g0220511 vs. ExPASy Swiss-Prot
Match: O14317 (60S acidic ribosomal protein P2-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpp203 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-11
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           ++ VG E++ E++E L+ E+ GKDI ELIA G EK+A++P+G    A  AA P+    AA
Sbjct: 27  LSTVGIESESERVEALIKELDGKDIDELIAAGNEKLATVPSG---GAAAAAAPAAAGGAA 86

Query: 61  PVAAEAKKEEKDDAMDSDEDICFSLFE 88
           P A EA KEE  +  +SDED+ F LF+
Sbjct: 87  PAAEEAAKEEAKEEEESDEDMGFGLFD 110

[Close]

BLAST of Cmc08g0220511 vs. ExPASy Swiss-Prot
Match: P51407 (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-11
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPS--TVDA 60
           +  VGAE +  +IELLL EVKGKD+ ELIA GREK+AS+P+G      VA+  S      
Sbjct: 27  LGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGG 86

Query: 61  AAPVAAEAKKEEKDDAMDSDEDICFSLFE 88
            AP A   K+E+K++  +SD+D+ FSLFE
Sbjct: 87  GAPAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Cmc08g0220511 vs. ExPASy TrEMBL
Match: A0A5A7SLD3 (60S acidic ribosomal protein P2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001160 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.2e-34
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 4  VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
          VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA
Sbjct: 7  VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 66

Query: 64 AEAKKEEKDDAMDSDEDICFSLFEDE 90
          AEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 67 AEAKKEEKDDAMDSDEDICFSLFEDE 92

[Close]

BLAST of Cmc08g0220511 vs. ExPASy TrEMBL
Match: A0A1S4E3U5 (60S acidic ribosomal protein P2-like OS=Cucumis melo OX=3656 GN=LOC103500881 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.2e-34
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 4   VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
           VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA
Sbjct: 30  VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 89

Query: 64  AEAKKEEKDDAMDSDEDICFSLFEDE 90
           AEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 90  AEAKKEEKDDAMDSDEDICFSLFEDE 115

[Close]

BLAST of Cmc08g0220511 vs. ExPASy TrEMBL
Match: A0A0A0KEV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G451480 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.1e-30
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           ++ VGAEA+VEKIELL+AE+KGKDITELIA  REKMASLPTGAVVAA VAAVPSTVD AA
Sbjct: 48  LSSVGAEAEVEKIELLIAELKGKDITELIAYAREKMASLPTGAVVAAAVAAVPSTVDTAA 107

Query: 61  PVAAEAKKEEKDDAMDSDEDICFSLFEDE 90
           PV AEAKKEEKDDAMDSDEDICFSLFEDE
Sbjct: 108 PVGAEAKKEEKDDAMDSDEDICFSLFEDE 136

[Close]

BLAST of Cmc08g0220511 vs. ExPASy TrEMBL
Match: A0A5D2MD03 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G254200v1 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-15
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           +  VGAEA+ E+I+LLL+EVKGKDITELIA GREK+AS+P+G    AV AA P    AAA
Sbjct: 27  LGSVGAEAEDERIQLLLSEVKGKDITELIASGREKLASVPSGGGGVAVAAAAPGAGAAAA 86

Query: 61  PVAAEAKKEEK-DDAMDSDEDICFSLFE 88
           P AAEAKKEEK ++  +SD+D+ FSLF+
Sbjct: 87  PAAAEAKKEEKVEEKEESDDDMGFSLFD 114

[Close]

BLAST of Cmc08g0220511 vs. ExPASy TrEMBL
Match: A0A5D2RVP6 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A01G245100v1 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-15
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           +  VGAEA+ E+I+LLL+EVKGKDITELIA GREK+AS+P+G    AV AA P    AAA
Sbjct: 27  LGSVGAEAEDERIQLLLSEVKGKDITELIASGREKLASVPSGGGGVAVAAAAPGVGAAAA 86

Query: 61  PVAAEAKKEEK-DDAMDSDEDICFSLFE 88
           P AAEAKKEEK ++  +SD+D+ FSLF+
Sbjct: 87  PAAAEAKKEEKVEEKEESDDDMGFSLFD 114

[Close]

BLAST of Cmc08g0220511 vs. TAIR 10
Match: AT3G44590.2 (60S acidic ribosomal protein family )

HSP 1 Score: 74.7 bits (182), Expect = 4.2e-14
Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 4   VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
           VGA+ D E IELLL EV GKDI ELIA GREK+AS+P+G  VA  V+A PS+    A   
Sbjct: 30  VGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVA--VSAAPSSGGGGAAAP 89

Query: 64  AEAKKEEKDDAMDSDEDICFSLFE 88
           AE K+ +K++  +SD+D+ FSLFE
Sbjct: 90  AEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of Cmc08g0220511 vs. TAIR 10
Match: AT3G44590.1 (60S acidic ribosomal protein family )

HSP 1 Score: 74.7 bits (182), Expect = 4.2e-14
Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 4   VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAAPVA 63
           VGA+ D E IELLL EV GKDI ELIA GREK+AS+P+G  VA  V+A PS+    A   
Sbjct: 30  VGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVA--VSAAPSSGGGGAAAP 89

Query: 64  AEAKKEEKDDAMDSDEDICFSLFE 88
           AE K+ +K++  +SD+D+ FSLFE
Sbjct: 90  AEKKEAKKEEKEESDDDMGFSLFE 111

[Close]

BLAST of Cmc08g0220511 vs. TAIR 10
Match: AT2G27720.1 (60S acidic ribosomal protein family )

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-12
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPS--TVDA 60
           +  VGAE +  +IELLL EVKGKD+ ELIA GREK+AS+P+G      VA+  S      
Sbjct: 27  LGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGG 86

Query: 61  AAPVAAEAKKEEKDDAMDSDEDICFSLFE 88
            AP A   K+E+K++  +SD+D+ FSLFE
Sbjct: 87  GAPAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of Cmc08g0220511 vs. TAIR 10
Match: AT2G27720.3 (60S acidic ribosomal protein family )

HSP 1 Score: 68.6 bits (166), Expect = 3.0e-12
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 4   VGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPS--TVDAAAP 63
           VGAE +  +IELLL EVKGKD+ ELIA GREK+AS+P+G      VA+  S       AP
Sbjct: 42  VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAP 101

Query: 64  VAAEAKKEEKDDAMDSDEDICFSLFE 88
            A   K+E+K++  +SD+D+ FSLFE
Sbjct: 102 AAESKKEEKKEEKEESDDDMGFSLFE 127

[Close]

BLAST of Cmc08g0220511 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 67.8 bits (164), Expect = 5.1e-12
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0


Query: 1   MNKVGAEADVEKIELLLAEVKGKDITELIACGREKMASLPTGAVVAAVVAAVPSTVDAAA 60
           +  VGAE +  +IELLL EVKGKD+ ELIA GREK+AS+P+G      VA+  S      
Sbjct: 27  LGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGG 86

Query: 61  PV-AAEAKKEE-KDDAMDSDEDICFSLFE 88
              AAE+KKEE K++  +SD+D+ FSLFE
Sbjct: 87  GASAAESKKEEKKEEKEESDDDMGFSLFE 115

The following BLAST results are available for this feature:

BLAST of Cmc08g0220511 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025275.1	1.3e-33	100.00	60S acidic ribosomal protein P2-like [Cucumis melo var. makuwa] >TYK07392.1 60S ...	[more]
XP_016902906.1	1.3e-33	100.00	PREDICTED: 60S acidic ribosomal protein P2-like [Cucumis melo]	[more]
XP_004143377.1	1.5e-29	87.64	60S acidic ribosomal protein P2 [Cucumis sativus] >XP_031743701.1 60S acidic rib...	[more]
KAF7804322.1	4.6e-15	63.64	60S acidic ribosomal protein P2-like [Senna tora]	[more]
XP_017620362.1	6.0e-15	62.50	PREDICTED: 60S acidic ribosomal protein P2A-like [Gossypium arboreum]	[more]

BLAST of Cmc08g0220511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41099	1.1e-14	60.00	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]
P46252	1.5e-13	57.95	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]
Q9LXM8	5.9e-13	55.95	60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 ...	[more]
O14317	1.1e-11	47.13	60S acidic ribosomal protein P2-C OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]
P51407	2.5e-11	49.44	60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 ...	[more]

BLAST of Cmc08g0220511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLD3	6.2e-34	100.00	60S acidic ribosomal protein P2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4E3U5	6.2e-34	100.00	60S acidic ribosomal protein P2-like OS=Cucumis melo OX=3656 GN=LOC103500881 PE=...	[more]
A0A0A0KEV8	7.1e-30	87.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G451480 PE=3 SV=1	[more]
A0A5D2MD03	2.9e-15	62.50	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G254200v1 P...	[more]
A0A5D2RVP6	2.9e-15	62.50	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A01G245100v1 P...	[more]

BLAST of Cmc08g0220511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44590.2	4.2e-14	55.95	60S acidic ribosomal protein family	[more]
AT3G44590.1	4.2e-14	55.95	60S acidic ribosomal protein family	[more]
AT2G27720.1	1.7e-12	49.44	60S acidic ribosomal protein family	[more]
AT2G27720.3	3.0e-12	51.16	60S acidic ribosomal protein family	[more]
AT2G27710.1	5.1e-12	51.69	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 2..86 e-value: 9.2E-13 score: 48.6
None	No IPR available	PANTHER	PTHR21141:SF96	60S ACIDIC RIBOSOMAL PROTEIN P2B	coord: 2..86
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..31 e-value: 7.3E-7 score: 31.1
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0220511.1	Cmc08g0220511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome