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Cmc08g0220431 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCATTGAAGGAACCTTTCAACTTCCTCTCAAGAAAAAACTTCACCCACTTCAACTACCTTTATAACCCAAACCTTATTCATTTCTTTCTTATACACACACACATGTATATATACACATATTAGCATTAAGAAACATAACCAATTAATTCCATATAGAAGTGTTATATATACAATGGGGAAGAGATCACCATCACCACCACCACCACCATCCTCATCAAAGGCAACGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAGAGCAGTGAATTATTAGAGTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATTAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCACATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTATCAAATATCCCACCTTTCTCACACCTTAATTATTATTCATCTAATTCAATTATATTTTTCTTGGGTTATTATATCATTATATATATTGCTTCTTCTTTTGTTTCCGATAAGTTTTTGTAATGGATAATCTTATGTGTATCTTTTTAGTTAACAATTGTAATGGTGTGGAAAATTGAACCGTCCGTCCTTGAAACGATAATTTTTTTTTTCTTTTTGACAATATAGGTGTAAAGAAGAATCAAACTTTTTAACTTTTTCGAGATTTATTCTATTTGCTTTATAATAATACTTATGCTTATCATGATTTACTGAGTTATGTTCA CTTCATTGAAGGAACCTTTCAACTTCCTCTCAAGAAAAAACTTCACCCACTTCAACTACCTTTATAACCCAAACCTTATTCATTTCTTTCTTATACACACACACATGTATATATACACATATTAGCATTAAGAAACATAACCAATTAATTCCATATAGAAGTGTTATATATACAATGGGGAAGAGATCACCATCACCACCACCACCACCATCCTCATCAAAGGCAACGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAGAGCAGTGAATTATTAGAGTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATTAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCACATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTATCAAATATCCCACCTTTCTCACACCTTAATTATTATTCATCTAATTCAATTATATTTTTCTTGGGTTATTATATCATTATATATATTGCTTCTTCTTTTGTTTCCGATAAGTTTTTGTAATGGATAATCTTATGTGTATCTTTTTAGTTAACAATTGTAATGGTGTGGAAAATTGAACCGTCCGTCCTTGAAACGATAATTTTTTTTTTCTTTTTGACAATATAGGTGTAAAGAAGAATCAAACTTTTTAACTTTTTCGAGATTTATTCTATTTGCTTTATAATAATACTTATGCTTATCATGATTTACTGAGTTATGTTCA ATGGGGAAGAGATCACCATCACCACCACCACCACCATCCTCATCAAAGGCAACGGTGGTTAGTTTGGTAATTTTGGTATTGAGTTGCTTAATATGGTGTTGCAAGAGCAGTGAATTATTAGAGTACAATTGTGAAGAGATATATGTTGTTCATGAAGGAGAAACTTTGCAAAGCATTAGTGAAAAATGTGGAGATCCATTCATTGTTGAAGAAAATCCTCACATTAATGATCCAGATGATGTTTTTCCTGGTTTGGTTATCAAGATCACTCCTTTTCACCATTTTATCAAATATCCCACCTTTCTCACACCTTAA MGKRSPSPPPPPSSSKATVVSLVILVLSCLIWCCKSSELLEYNCEEIYVVHEGETLQSISEKCGDPFIVEENPHINDPDDVFPGLVIKITPFHHFIKYPTFLTP Homology
BLAST of Cmc08g0220431 vs. NCBI nr
Match: KAE8647420.1 (hypothetical protein Csa_003059 [Cucumis sativus]) HSP 1 Score: 187.6 bits (475), Expect = 5.5e-44 Identity = 94/104 (90.38%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of Cmc08g0220431 vs. NCBI nr
Match: KAG6595189.1 (hypothetical protein SDJN03_11742, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027207.1 hypothetical protein SDJN02_11218, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114.0 bits (284), Expect = 7.8e-22 Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 0
BLAST of Cmc08g0220431 vs. NCBI nr
Match: XP_022744694.1 (uncharacterized protein LOC111295462 [Durio zibethinus]) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of Cmc08g0220431 vs. NCBI nr
Match: XP_010271716.1 (PREDICTED: uncharacterized protein LOC104607716 [Nelumbo nucifera]) HSP 1 Score: 105.5 bits (262), Expect = 2.8e-19 Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0
BLAST of Cmc08g0220431 vs. NCBI nr
Match: OMO68297.1 (hypothetical protein COLO4_29778 [Corchorus olitorius] >OMO82149.1 hypothetical protein CCACVL1_12057 [Corchorus capsularis]) HSP 1 Score: 105.1 bits (261), Expect = 3.6e-19 Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Cmc08g0220431 vs. ExPASy TrEMBL
Match: A0A6P5YVX7 (uncharacterized protein LOC111295462 OS=Durio zibethinus OX=66656 GN=LOC111295462 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.8e-20 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of Cmc08g0220431 vs. ExPASy TrEMBL
Match: A0A1U8AYB4 (uncharacterized protein LOC104607716 OS=Nelumbo nucifera OX=4432 GN=LOC104607716 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0
BLAST of Cmc08g0220431 vs. ExPASy TrEMBL
Match: A0A1R3IHT9 (LysM domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_12057 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.7e-19 Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Cmc08g0220431 vs. ExPASy TrEMBL
Match: A0A1R3HD93 (LysM domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_29778 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.7e-19 Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Cmc08g0220431 vs. ExPASy TrEMBL
Match: A0A803MQG7 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.9e-19 Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Cmc08g0220431 vs. TAIR 10
Match: AT4G25433.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19 Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of Cmc08g0220431 vs. TAIR 10
Match: AT5G62150.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19 Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Cmc08g0220431 vs. TAIR 10
Match: AT3G52790.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 84.3 bits (207), Expect = 6.1e-17 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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