Cmc08g0216141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0216141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	60S ribosomal export protein NMD3
Location	CMiso1.1chr08: 5491075 .. 5493759 (+)
RNA-Seq Expression	Cmc08g0216141
Synteny	Cmc08g0216141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGAGAAGGAAAAGTATTATATATATATATATATATATATATATATAACGCACTTTATTTATTTTAGCCCTACAAACCTGTTAGGAAAGAAGAAATCTTTCATCTTCTTCTCGTTCCTTCGTGAGCGCCGACTCACCCCTCCCACCTCTACGTTTTCATCTTCTCCGGCGGCCACTTCCCGTCGCTATCTCCATCTCCAAGCGTCGATCCTCAGCCGCAAGCCACGCCTTTTTGCTTCTTCAACCCCACGTCAGTCGCGCCCTCTCCTCTATCTCGCACGCTGTCCGCCGCCGCCAGTATCCTTCGTGCCGCGATCCTCCTGAGCTTCTCTTCGCCGTCTGTGGATCTCGTGCTGCCGTGAGTTGTCGCTGGAATATCAGTATTTGCGTTTTGTTGGTGGTAAGACTTGATGTTTTGCGGGCTTTGTTGAGTTTTACCCTATAATCAATAAGTTTTAAAATCCTGCCAATTCGTACTCTTTTGTGTTAATCAGACGCCGTTTTGCATTTTTTTATTATTATTATTAATTACCTATTTCTGTTATAGATTCTTGTTGTAGCTAAATTCTATAAAAATTATCTGTTTTCCATACATTTTGATTAACGAGTGTAATAGATCTTCACTGAATTTTTCTGAACGTTTTTATTTTGGAAAAGTAAAATTTTCGACCTGCGGGTATCAATTCAGATTGAATTTCATTTCTTATTCAAACCAAATCGTGCCAAACAAGGGGCTAGAATTTGGCTTGGATTCATTTTTTTGAAAGCCTTTTCTTGCGAATTTATTTACTTCATATTATAAACTTTAGGATTTAACTGGTGTTGGTTGGTTCATCTTTGTTAGGAGTATATACCATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCACTGTCTTATGTTGCAAATGTGGAATTCCCATGACACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCTGAGGTTGACATCACTGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGACTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCACAATTAGAATCAAAGGAACTGTTGACATTCTGTATCAAAAGGTTGAGAAATTTGAATAAAGTTAAACTGGTGCATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCCTACGTTGTGGAGTATGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGATCCAGGCTAATCCCGATCAATGGGTGGCTTCTGTTCAACTTAGGCAACATGTTCCTCACCGCCGTACCTTTTTCTTCTTGGAGCAATTGATACTGAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAGCAGATGGATCAAGGTATTGATTTTTTCTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTCGTTGGAAAGGTTGCTCCAATCAGGAGCCGTCACGATAAACAACTTGTTTCACATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGTCCTCTTGTAATTTGCACCAAAGTTACAAATGCTATTGCTTTACTTGATCCATTCACATTAAGGCACTGCTTCTTGGATGCTGATCAATATTGGAGGACATCCTTTAGGTCTCTACTTACCAGCAGGCAACTTGTGGAATATGTTGTATTGGATATAGAAAATGTTTCAACTGAAGTCAATGTTGCTGGTTCCAAGTATATGTTGGCCTATGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACGATGTTCTCCATAAAAACCCATCTAGGTCATATCTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAACGATATGGAGCTAGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCTATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGTAAGCCTCGATCATGGAAGCTCAAATCTCTTGCAATGGATGTTGATGATAAAAGTAAAGTAGATGAAAATAAGATGAACTCCGAATACGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATTTCATTGTACCGTAATAGAGAATACCAACCATCTGAAATTACTGATGGGGAAGATGGACCGTCAGTACCACTTGACGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGAGACGATGCCATGAACGAGTAAGTAGTGCCCTGCAGCGCTCGATTTTCTTTATTAGAAATGTGGGGTTGGAGGTAATTCTGTAATTTAATTGTTCGAATTATGCTCATTTTGGCCCACGCAACAAGGAGTTGAAAAGGTGTGTTATTGCTTGTATTTTCAGTCCTATAGCATCTCTGGTCTTTTTCTAGTTTGTTTACAAGAGGATACAAATTTATTATCAACAAATTTTTGTTTTCTTATCTGGAATGTGATTTTGAGTGATTATCTCCGCTTTACTGGACGCCCAAAGTGAATAAAATTTCTCAGTTCTTTTTTGACCTCTTCAAACTAATT

mRNA sequence

GAGGAGAAGGAAAAGTATTATATATATATATATATATATATATATATAACGCACTTTATTTATTTTAGCCCTACAAACCTGTTAGGAAAGAAGAAATCTTTCATCTTCTTCTCGTTCCTTCGTGAGCGCCGACTCACCCCTCCCACCTCTACGTTTTCATCTTCTCCGGCGGCCACTTCCCGTCGCTATCTCCATCTCCAAGCGTCGATCCTCAGCCGCAAGCCACGCCTTTTTGCTTCTTCAACCCCACGTCAGTCGCGCCCTCTCCTCTATCTCGCACGCTGTCCGCCGCCGCCAGTATCCTTCGTGCCGCGATCCTCCTGAGCTTCTCTTCGCCGTCTGTGGATCTCGTGCTGCCGTGAGTTGTCGCTGGAATATCAGTATTTGCGTTTTGTTGGTGGAGTATATACCATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCACTGTCTTATGTTGCAAATGTGGAATTCCCATGACACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCTGAGGTTGACATCACTGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGACTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCACAATTAGAATCAAAGGAACTGTTGACATTCTGTATCAAAAGGTTGAGAAATTTGAATAAAGTTAAACTGGTGCATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCCTACGTTGTGGAGTATGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGATCCAGGCTAATCCCGATCAATGGGTGGCTTCTGTTCAACTTAGGCAACATGTTCCTCACCGCCGTACCTTTTTCTTCTTGGAGCAATTGATACTGAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAGCAGATGGATCAAGGTATTGATTTTTTCTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTCGTTGGAAAGGTTGCTCCAATCAGGAGCCGTCACGATAAACAACTTGTTTCACATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGTCCTCTTGTAATTTGCACCAAAGTTACAAATGCTATTGCTTTACTTGATCCATTCACATTAAGGCACTGCTTCTTGGATGCTGATCAATATTGGAGGACATCCTTTAGGTCTCTACTTACCAGCAGGCAACTTGTGGAATATGTTGTATTGGATATAGAAAATGTTTCAACTGAAGTCAATGTTGCTGGTTCCAAGTATATGTTGGCCTATGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACGATGTTCTCCATAAAAACCCATCTAGGTCATATCTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAACGATATGGAGCTAGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCTATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGTAAGCCTCGATCATGGAAGCTCAAATCTCTTGCAATGGATGTTGATGATAAAAGTAAAGTAGATGAAAATAAGATGAACTCCGAATACGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATTTCATTGTACCGTAATAGAGAATACCAACCATCTGAAATTACTGATGGGGAAGATGGACCGTCAGTACCACTTGACGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGAGACGATGCCATGAACGAGTAAGTAGTGCCCTGCAGCGCTCGATTTTCTTTATTAGAAATGTGGGGTTGGAGGTAATTCTGTAATTTAATTGTTCGAATTATGCTCATTTTGGCCCACGCAACAAGGAGTTGAAAAGGTGTGTTATTGCTTGTATTTTCAGTCCTATAGCATCTCTGGTCTTTTTCTAGTTTGTTTACAAGAGGATACAAATTTATTATCAACAAATTTTTGTTTTCTTATCTGGAATGTGATTTTGAGTGATTATCTCCGCTTTACTGGACGCCCAAAGTGAATAAAATTTCTCAGTTCTTTTTTGACCTCTTCAAACTAATT

Coding sequence (CDS)

ATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCACTGTCTTATGTTGCAAATGTGGAATTCCCATGACACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCTGAGGTTGACATCACTGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGACTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCACAATTAGAATCAAAGGAACTGTTGACATTCTGTATCAAAAGGTTGAGAAATTTGAATAAAGTTAAACTGGTGCATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCCTACGTTGTGGAGTATGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGATCCAGGCTAATCCCGATCAATGGGTGGCTTCTGTTCAACTTAGGCAACATGTTCCTCACCGCCGTACCTTTTTCTTCTTGGAGCAATTGATACTGAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAGCAGATGGATCAAGGTATTGATTTTTTCTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTCGTTGGAAAGGTTGCTCCAATCAGGAGCCGTCACGATAAACAACTTGTTTCACATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGTCCTCTTGTAATTTGCACCAAAGTTACAAATGCTATTGCTTTACTTGATCCATTCACATTAAGGCACTGCTTCTTGGATGCTGATCAATATTGGAGGACATCCTTTAGGTCTCTACTTACCAGCAGGCAACTTGTGGAATATGTTGTATTGGATATAGAAAATGTTTCAACTGAAGTCAATGTTGCTGGTTCCAAGTATATGTTGGCCTATGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACGATGTTCTCCATAAAAACCCATCTAGGTCATATCTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAACGATATGGAGCTAGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCTATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGTAAGCCTCGATCATGGAAGCTCAAATCTCTTGCAATGGATGTTGATGATAAAAGTAAAGTAGATGAAAATAAGATGAACTCCGAATACGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATTTCATTGTACCGTAATAGAGAATACCAACCATCTGAAATTACTGATGGGGAAGATGGACCGTCAGTACCACTTGACGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGAGACGATGCCATGAACGAGTAA

Protein sequence

MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSVPLDELLADLDLSEGEGDDAMNE

Homology

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BLAST of Cmc08g0216141 vs. NCBI nr
Match: XP_008440695.1 (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo] >TYK12635.1 60S ribosomal export protein NMD3 [Cucumis melo var. makuwa])

HSP 1 Score: 1014.6 bits (2622), Expect = 2.9e-292
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPLDELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cmc08g0216141 vs. NCBI nr
Match: KAA0036240.1 (60S ribosomal export protein NMD3 [Cucumis melo var. makuwa])

HSP 1 Score: 1013.1 bits (2618), Expect = 8.6e-292
Identity = 504/505 (99.80%), Postives = 504/505 (99.80%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNK KLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKAKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPLDELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cmc08g0216141 vs. NCBI nr
Match: XP_004143504.1 (60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypothetical protein Csa_003669 [Cucumis sativus])

HSP 1 Score: 1001.1 bits (2587), Expect = 3.4e-288
Identity = 497/505 (98.42%), Postives = 501/505 (99.21%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLF+VQQTIGTVLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL+MDVDDK+KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPL+ELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cmc08g0216141 vs. NCBI nr
Match: XP_038883907.1 (60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida])

HSP 1 Score: 975.7 bits (2521), Expect = 1.5e-280
Identity = 481/505 (95.25%), Postives = 496/505 (98.22%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 97  MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 156

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 157 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 216

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 217 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 276

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEF+GKV  IRSRHDKQLVSHDPKSNIHNH
Sbjct: 277 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVVSIRSRHDKQLVSHDPKSNIHNH 336

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDA+Q
Sbjct: 337 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDAEQ 396

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVAR+SDFGRNDT+FSIK
Sbjct: 397 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARLSDFGRNDTIFSIK 456

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELP+AILIKKSYEEKR RKRGKPR+W
Sbjct: 457 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPDAILIKKSYEEKRLRKRGKPRAW 516

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL MDVDDK K +E+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 517 KLKSLEMDVDDKGKAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 576

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPL+ELLADLDLSEGEGD+ M+E
Sbjct: 577 PSVPLEELLADLDLSEGEGDNDMDE 601

[Close]

BLAST of Cmc08g0216141 vs. NCBI nr
Match: XP_038883908.1 (60S ribosomal export protein NMD3 isoform X2 [Benincasa hispida] >XP_038883909.1 60S ribosomal export protein NMD3 isoform X2 [Benincasa hispida])

HSP 1 Score: 975.7 bits (2521), Expect = 1.5e-280
Identity = 481/505 (95.25%), Postives = 496/505 (98.22%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEF+GKV  IRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVVSIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDAEQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVAR+SDFGRNDT+FSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARLSDFGRNDTIFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELP+AILIKKSYEEKR RKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPDAILIKKSYEEKRLRKRGKPRAW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL MDVDDK K +E+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLEMDVDDKGKAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPL+ELLADLDLSEGEGD+ M+E
Sbjct: 481 PSVPLEELLADLDLSEGEGDNDMDE 505

[Close]

BLAST of Cmc08g0216141 vs. ExPASy Swiss-Prot
Match: Q6GNS3 (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.6e-126
Identity = 224/488 (45.90%), Postives = 330/488 (67.62%), Query Frame = 0


Query: 15  GTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G +LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+L+ NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           +YVVQ  +C+ C R++A  D W A VQ+RQ V H++TF++LEQ ILKH    + +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ HG K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR  F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILN 374
           Q+ E++V+D E +      AG     +K++LA   V + S+       +  +THLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQ-QYHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  R+++R   R+WKLK +  D
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLKEMDRD 432

Query: 435 VDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSVPLDEL 494
            +     DE     +Y+ FL DLEE+  LR N+++++N        TD E  P + L E+
Sbjct: 433 REGMDTDDER----QYQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLAEM 491

Query: 495 LADLDLSE 497
           L DL +S+
Sbjct: 493 LEDLHISQ 491

[Close]

BLAST of Cmc08g0216141 vs. ExPASy Swiss-Prot
Match: Q6P2Z6 (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 3.4e-126
Identity = 226/501 (45.11%), Postives = 334/501 (66.67%), Query Frame = 0


Query: 15  GTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G +LCC+CGIP+ PN ANMCV CL  +VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+L+ NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           +Y+VQ  +C+ C R++A  D W A VQ+RQ V H++TF++LEQ ILKH    + +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ H  K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR+ F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILN 374
           QL E++V+D + V      AG     +K++LA   V + S+       +  +THLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQ-QYHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  ++++R   R+WKLK +  D
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRR---RNWKLKEIERD 432

Query: 435 VDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSVPLDEL 494
            +     DE     +Y+ FL DLEE+  +R N+++Y+N        TD E  P + L E+
Sbjct: 433 REGMDTDDER----QYQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLAEM 492

Query: 495 LAD----LDLSEGEGDDAMNE 506
           L D    LD + GEG + + E
Sbjct: 493 LEDLHISLDATGGEGAEMLTE 504

[Close]

BLAST of Cmc08g0216141 vs. ExPASy Swiss-Prot
Match: Q08DS5 (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 4.6e-123
Identity = 225/504 (44.64%), Postives = 333/504 (66.07%), Query Frame = 0


Query: 10  VQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 69
           V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP T
Sbjct: 8   VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67

Query: 70  WIKAQLESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILE 129
           W++  LES++LL  C+K+++  L+KV+LV A FVWTEPHSKR+KVKL +QKEV++GAIL+
Sbjct: 68  WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127

Query: 130 QSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAI 189
           Q +VV+YVVQ  +C  C R++A  D W A VQ+RQ   H++TF++LEQLILK+G   + +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187

Query: 190 RIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEI 249
           RIK++  G+DF++S++ H  K VEF+    P R +  ++L+S D  SN +N+K TFSVEI
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247

Query: 250 SPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRS 309
            PIC+++++CL PK+A SLGN+  + +C +VT+ I L+DP TL+   +D + +W   F S
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307

Query: 310 LLTSRQLVEYVVLDIENVSTEVNVAGS-----KYMLAYAQVARVSDFGRNDTMFSIKTHL 369
           L   +QL E++V++   V      AG+     K+ L    V + S+    D  +  +THL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEM-NTDKQYFCRTHL 367

Query: 370 GHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLK 429
           GH+LNPGD  LG+DL   N ND  + K K   +P+ +LIKKSY+  R+++R   R+WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427

Query: 430 SLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSV 489
            LA D ++    DE     +Y+ FL DLEE+  +R N+++YR+        TD E  P +
Sbjct: 428 ELARDRENTDTDDER----QYQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAPRI 487

Query: 490 PLDELLADLDLSE----GEGDDAM 504
            L E+L DL +S+    GEG+  M
Sbjct: 488 SLAEMLEDLHISQDATGGEGESMM 502

[Close]

BLAST of Cmc08g0216141 vs. ExPASy Swiss-Prot
Match: Q5BLF0 (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.0e-122
Identity = 226/502 (45.02%), Postives = 336/502 (66.93%), Query Frame = 0


Query: 15  GTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G +LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI  C  CE YLQPP +W++  
Sbjct: 13  GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72

Query: 75  LESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELL  C+K+L+ +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GAIL+Q + V
Sbjct: 73  LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132

Query: 135 EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           E+VVQ  +CE C R++A  D W A VQ+RQ   H++TF++LEQLILKH    + +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
            +GIDF+++ + H  K V+F+    P RS+  ++L+SHD  SN +N+K TFSVEI P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++++CL P++A SLGN+G + +C +VT++I L+DP TL+   +D   +WR  F SL + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILN 374
           QL E++++DI+ +  +   AG     +K+ LA   V + S+   +   +  +T +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMD-SSHQYHCRTFMGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD 434
            GD  LG+D   AN ND  L K     +P+ +LIKKSY+   + KR + R WKLK +  +
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432

Query: 435 VDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGED--GPSVPLD 494
            D     DE     +Y +FL DLEE+  LR NI+++R+    P E +D +D   P + L 
Sbjct: 433 KDAADTDDER----QYTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLA 492

Query: 495 ELLADLDLSE---GEGDDAMNE 506
           E+L DL LS+   GEG D M +
Sbjct: 493 EMLEDLSLSDATGGEGADMMTD 505

[Close]

BLAST of Cmc08g0216141 vs. ExPASy Swiss-Prot
Match: Q55BF2 (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 5.1e-122
Identity = 217/457 (47.48%), Postives = 317/457 (69.37%), Query Frame = 0


Query: 17  VLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLE 76
           +LCC CG+ +  N +NMCV C+ S+VDITEG+ KQLTI  C  C  YLQPP  W  A+LE
Sbjct: 12  ILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAELE 71

Query: 77  SKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEYV 136
           S+ELLT CIKR++ LNKVKLV A +VWTEPHSKR+KVKL +QKEV   AIL+Q +++E++
Sbjct: 72  SRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEFI 131

Query: 137 VQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMDQG 196
           VQ   C+ C + +A  D W + VQLRQ V H+RTF ++EQLILKH A +  + IK+   G
Sbjct: 132 VQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPDG 191

Query: 197 IDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDL 256
           +DFFFSNR+H +KFVEF+  + P++++  +QL+S D ++N  N+K+TFSVEI P+ ++D+
Sbjct: 192 LDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDDI 251

Query: 257 ICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLV 316
           +CLPPK+A  LGN+GPLV+ TKV+N I  +DP TL    + A  +W + FR+L + +QLV
Sbjct: 252 VCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQLV 311

Query: 317 EYVVLDIENVSTEVNVAGS---KYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYA 376
           E+ VLD       VN+ G+   +Y L+  Q+ R +DFG ND ++ I++HLG+ILNPGD A
Sbjct: 312 EFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDLA 371

Query: 377 LGYDLYGANSNDMELE-KYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD-VDD 436
           LGYD+  +N  D +L    K  +LP+ +L+KK+Y  K   +    R W  K +  + +++
Sbjct: 372 LGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFR--FKRHWYFKEIPKEGIEN 431

Query: 437 KSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNRE 469
             K + ++M  + E+FLR++E +P+LR  I++Y+  +
Sbjct: 432 PKKFEIDQMERDREEFLREIEADPELRSKINIYKEAD 458

[Close]

BLAST of Cmc08g0216141 vs. ExPASy TrEMBL
Match: A0A5D3CM67 (60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002220 PE=3 SV=1)

HSP 1 Score: 1014.6 bits (2622), Expect = 1.4e-292
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPLDELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cmc08g0216141 vs. ExPASy TrEMBL
Match: A0A1S3B197 (60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 SV=1)

HSP 1 Score: 1014.6 bits (2622), Expect = 1.4e-292
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPLDELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cmc08g0216141 vs. ExPASy TrEMBL
Match: A0A5A7SYS9 (60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00380 PE=3 SV=1)

HSP 1 Score: 1013.1 bits (2618), Expect = 4.2e-292
Identity = 504/505 (99.80%), Postives = 504/505 (99.80%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNK KLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKAKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPLDELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cmc08g0216141 vs. ExPASy TrEMBL
Match: A0A0A0KGY6 (60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=3 SV=1)

HSP 1 Score: 1001.1 bits (2587), Expect = 1.6e-288
Identity = 497/505 (98.42%), Postives = 501/505 (99.21%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLF+VQQTIGTVLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL+MDVDDK+KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPL+ELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cmc08g0216141 vs. ExPASy TrEMBL
Match: A0A6J1GFH4 (60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 PE=3 SV=1)

HSP 1 Score: 954.9 bits (2467), Expect = 1.3e-274
Identity = 470/507 (92.70%), Postives = 491/507 (96.84%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E GLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+R+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMD+GIDFFFSNRSH VKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDT+FSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL MDVDD+ + DE+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 481 PSVPLDELLADLDLSE--GEGDDAMNE 506
           PSVPL+ELLADLDL E  G+GDD M+E
Sbjct: 481 PSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of Cmc08g0216141 vs. TAIR 10
Match: AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein )

HSP 1 Score: 704.9 bits (1818), Expect = 4.7e-203
Identity = 353/505 (69.90%), Postives = 416/505 (82.38%), Query Frame = 0


Query: 4   ETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63
           E+G+F VQQTIG+VLCCKCG+PM PNAANMCV CL SEVDITEGLQK + I +CP+C  Y
Sbjct: 6   ESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCY 65

Query: 64  LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLH 123
           LQPP+TWIK Q ESKELLTFCIKRL+NLNKVKL +AEFVWTEPHSKRIKVKL VQ EVL+
Sbjct: 66  LQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLN 125

Query: 124 GAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGA 183
           GA+LEQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQHV HRRTFF+LEQLIL+H A
Sbjct: 126 GAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDA 185

Query: 184 AASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243
           A+ AIRI+Q+DQGIDFFF N+SH   FVEF+ KV PI  R D+QLVSHD KS+++N+K+T
Sbjct: 186 ASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYT 245

Query: 244 FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWR 303
           +SV+I P+CREDL+CLP KVA  LGNLGPLV+CTKV++ I LLDP TLR  FLDA QYWR
Sbjct: 246 YSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWR 305

Query: 304 TSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHL 363
           + FRS LTSRQLV+Y V D+E    E  V G KY L+Y Q+AR SD G+   MF ++THL
Sbjct: 306 SGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHL 365

Query: 364 GHILNPGDYALGYDLYGANSNDMELEKYK---GLELPEAILIKKSYEEKRQRKRGKPRSW 423
           GHIL PGD ALGYD+YGAN ND E+EKY+      LPEAILIKK YEE+R+RK+ K R+W
Sbjct: 366 GHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNW 425

Query: 424 KLKSLAMDVDD-KSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---ITD 483
           KLKSL M++DD + +VD  K + EYE+FLRDLEENP+LRFNISLYR+++YQ SE   +TD
Sbjct: 426 KLKSLPMEMDDSRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMTD 485

Query: 484 GEDGPSVPLDELLADLDLSEGEGDD 502
           GE  PSVP++ELLADLDLS  E DD
Sbjct: 486 GEGAPSVPIEELLADLDLSFEEEDD 507

The following BLAST results are available for this feature:

BLAST of Cmc08g0216141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440695.1	2.9e-292	100.00	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo] >TYK12635.1 60S ribo...	[more]
KAA0036240.1	8.6e-292	99.80	60S ribosomal export protein NMD3 [Cucumis melo var. makuwa]	[more]
XP_004143504.1	3.4e-288	98.42	60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypothetical pro...	[more]
XP_038883907.1	1.5e-280	95.25	60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida]	[more]
XP_038883908.1	1.5e-280	95.25	60S ribosomal export protein NMD3 isoform X2 [Benincasa hispida] >XP_038883909.1...	[more]

BLAST of Cmc08g0216141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6GNS3	2.6e-126	45.90	60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1	[more]
Q6P2Z6	3.4e-126	45.11	60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=...	[more]
Q08DS5	4.6e-123	44.64	60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1	[more]
Q5BLF0	1.0e-122	45.02	60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1	[more]
Q55BF2	5.1e-122	47.48	60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 P...	[more]

BLAST of Cmc08g0216141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CM67	1.4e-292	100.00	60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B197	1.4e-292	100.00	60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 S...	[more]
A0A5A7SYS9	4.2e-292	99.80	60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0KGY6	1.6e-288	98.42	60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=...	[more]
A0A6J1GFH4	1.3e-274	92.70	60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 ...	[more]

BLAST of Cmc08g0216141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03820.1	4.7e-203	69.90	nonsense-mediated mRNA decay NMD3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007064	Nmd3, N-terminal	PFAM	PF04981	NMD3	coord: 19..248 e-value: 7.7E-73 score: 244.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 491..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..505
None	No IPR available	PANTHER	PTHR12746:SF4	60S RIBOSOMAL EXPORT PROTEIN NMD3	coord: 1..498
IPR039768	Ribosomal export protein Nmd3	PANTHER	PTHR12746	NONSENSE-MEDIATED MRNA DECAY PROTEIN 3	coord: 1..498

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0216141.1	Cmc08g0216141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0000055	ribosomal large subunit export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043023	ribosomal large subunit binding