Cmc08g0215801 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0215801
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCMiso1.1chr08: 5322700 .. 5324968 (-)
RNA-Seq ExpressionCmc08g0215801
SyntenyCmc08g0215801
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCTTTTTTTCGCCAACTCTCTTAAACTTCGGCGAATTTACAAAATCCACCTTTTGCTTCATCGGATTTTGCCTATCCTCACCCCGTCGAACTCCAAGGTACTTCAAATTCTCCAATGCCTCTTTCACTTTCTCCGCAATTTTCTCCCATATTCACAACATCTTATTCTTCTTCCCGAACTTCCCAACTCTCTCGGCTATGGCTTCCAGTCCCTTCATCTCTAAAGAAGACCTTTTCGACTCGAGTGGTCTGTGTTTCAACTCGACCCAGTAGGAAATCTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATCAAAAAGTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTCCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTCAATGCCTCGAGGTTCGCTTCTCTTTTCTTGAACTTTGAATTTGAGCCTATGGGTATTGACTTTTGGAACTTGGATCGATGGGTAGTGATGAAAATGCTCAAAGACAGTTGATTGAATTTGAAATCGAGGATATGAATTTTCAATTTGTGAACGTTACACGGAATTAATTGAATTTTTTCACTGTAGTTCAAGCTCTATTTAGGCATAGATGAAGAAGGGAGAGTCTACACTTTTCTGCTATTATGTTTTATTGATGTGTTTTCATCTCCAGGTTTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATCATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACACCTTCATTCTAAGGACAAAGCTAAGGCTTTAGTTAAAGTCCTTTGGTACTTTGAAAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTTGATGAGAGTGTTGTTTCAGCCGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATCGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGTTTATTACGATCGAAGGAGAGGCCAACGCTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGACAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCAAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTGCCCTTCGAAGCCGATATGCTTTTTGAGAGTGCAGGTAATATGAAGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATATGAAGGAACTTCTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACGAGAAAAACCTGAACCTGCAAGAACTAAAACAGGTTCAAGAAACTCAGAAAGTAGTGTGGAAAAACAGTCTTCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAATATCTTCAAGAACTAGAACAGGCTCAAGAAACTTAGAAAGTGGTGTGGAAAACCATGCTCCAGAGTTAGGCTTAGCTTAAAATTTTATTTTTTTTGTAGTCAATCTACATTCTTTAGAAGCTTCTTGACTTCTCCTATTGGAATTTGGAGAATGGTACGGCAGTTCTACAAAAATTAGAGGAATGTTAGAGTTTTGAAAAGAAGCCAAAATTTTGTATATATGCTCATTTATTTTCCCATGAGATTTTATGACTTGATGAGGTTCGACTCCTCACAAAATTGGGATGTACAGACAAACTAAGTTTGCGTTGTATTTGTGGATTATATAAATTGATTCAATTATCATCGGAGAGCCTAAGCAACCGTCTGAACCATTT

mRNA sequence

CCCCTTTTTTTCGCCAACTCTCTTAAACTTCGGCGAATTTACAAAATCCACCTTTTGCTTCATCGGATTTTGCCTATCCTCACCCCGTCGAACTCCAAGGTACTTCAAATTCTCCAATGCCTCTTTCACTTTCTCCGCAATTTTCTCCCATATTCACAACATCTTATTCTTCTTCCCGAACTTCCCAACTCTCTCGGCTATGGCTTCCAGTCCCTTCATCTCTAAAGAAGACCTTTTCGACTCGAGTGGTCTGTGTTTCAACTCGACCCAGTAGGAAATCTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATCAAAAAGTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTCCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTCAATGCCTCGAGGTTTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATCATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACACCTTCATTCTAAGGACAAAGCTAAGGCTTTAGTTAAAGTCCTTTGGTACTTTGAAAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTTGATGAGAGTGTTGTTTCAGCCGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATCGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGTTTATTACGATCGAAGGAGAGGCCAACGCTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGACAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCAAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTGCCCTTCGAAGCCGATATGCTTTTTGAGAGTGCAGGTAATATGAAGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATATGAAGGAACTTCTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACGAGAAAAACCTGAACCTGCAAGAACTAAAACAGGTTCAAGAAACTCAGAAAGTAGTGTGGAAAAACAGTCTTCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAATATCTTCAAGAACTAGAACAGGCTCAAGAAACTTAGAAAGTGGTGTGGAAAACCATGCTCCAGAGTTAGGCTTAGCTTAAAATTTTATTTTTTTTGTAGTCAATCTACATTCTTTAGAAGCTTCTTGACTTCTCCTATTGGAATTTGGAGAATGGTACGGCAGTTCTACAAAAATTAGAGGAATGTTAGAGTTTTGAAAAGAAGCCAAAATTTTGTATATATGCTCATTTATTTTCCCATGAGATTTTATGACTTGATGAGGTTCGACTCCTCACAAAATTGGGATGTACAGACAAACTAAGTTTGCGTTGTATTTGTGGATTATATAAATTGATTCAATTATCATCGGAGAGCCTAAGCAACCGTCTGAACCATTT

Coding sequence (CDS)

ATGCCTCTTTCACTTTCTCCGCAATTTTCTCCCATATTCACAACATCTTATTCTTCTTCCCGAACTTCCCAACTCTCTCGGCTATGGCTTCCAGTCCCTTCATCTCTAAAGAAGACCTTTTCGACTCGAGTGGTCTGTGTTTCAACTCGACCCAGTAGGAAATCTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATCAAAAAGTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTCCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTCAATGCCTCGAGGTTTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATCATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACACCTTCATTCTAAGGACAAAGCTAAGGCTTTAGTTAAAGTCCTTTGGTACTTTGAAAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTTGATGAGAGTGTTGTTTCAGCCGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATCGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGTTTATTACGATCGAAGGAGAGGCCAACGCTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGACAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCAAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTGCCCTTCGAAGCCGATATGCTTTTTGAGAGTGCAGGTAATATGAAGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATATGAAGGAACTTCTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACGAGAAAAACCTGAACCTGCAAGAACTAAAACAGGTTCAAGAAACTCAGAAAGTAGTGTGGAAAAACAGTCTTCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAATATCTTCAAGAACTAGAACAGGCTCAAGAAACTTAGAAAGTGGTGTGGAAAACCATGCTCCAGAGTTAGGCTTAGCTTAA

Protein sequence

MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTDRSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSESSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA
Homology
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BLAST of Cmc08g0215801 vs. NCBI nr
Match: KAA0036266.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1040.8 bits (2690), Expect = 4.0e-300
Identity = 530/531 (99.81%), Postives = 530/531 (99.81%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLSLSPQFSPIFTTSYSSSRTSQLSRLW PVPSSLKKTFSTRVVCVSTRPSRKSGVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWFPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]
BLAST of Cmc08g0215801 vs. NCBI nr
Match: XP_008440667.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis melo] >TYK12660.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1038.5 bits (2684), Expect = 2.0e-299
Identity = 530/531 (99.81%), Postives = 530/531 (99.81%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTR SRKSGVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]
BLAST of Cmc08g0215801 vs. NCBI nr
Match: XP_004143565.1 (pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic [Cucumis sativus] >KGN48788.1 hypothetical protein Csa_003022 [Cucumis sativus])

HSP 1 Score: 986.1 bits (2548), Expect = 1.2e-283
Identity = 504/531 (94.92%), Postives = 515/531 (96.99%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLS S QFSP FT SYSS   SQLSRLWLP+PSS+KK  STRVVC+STRPSRK GVKTD
Sbjct: 1   MPLSFSLQFSPTFTPSYSS---SQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]
BLAST of Cmc08g0215801 vs. NCBI nr
Match: XP_023543919.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 912.5 bits (2357), Expect = 1.7e-261
Identity = 463/531 (87.19%), Postives = 485/531 (91.34%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLS S QFSP FT   SSSR  QLS+ WLP+P SL++  STRVVC+STRP+RKSG KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR++AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVE                   KPISSR R GSR LES V+NHAPELGLA
Sbjct: 481 SSVE-------------------KPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]
BLAST of Cmc08g0215801 vs. NCBI nr
Match: KAG7034169.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 911.4 bits (2354), Expect = 3.7e-261
Identity = 463/531 (87.19%), Postives = 484/531 (91.15%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLS S QFSP FT   SSSR  QLS+ WLP+P SL++  STRVVC+STRP+RKS  KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVE                   KPISSR R GSR LES V+NHAPELGLA
Sbjct: 481 SSVE-------------------KPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]
BLAST of Cmc08g0215801 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 8.2e-171
Identity = 310/491 (63.14%), Postives = 376/491 (76.58%), Query Frame = 0 

Query: 15  TSYSSSRTSQLSRLWLPVPSSL---KKTFSTRVVCVSTRPSRKSGVK-TDRSEAEELVRG 74
           + + SS   +    WL    +L   +++  TR+ C +    RK   + +   E   LVR 
Sbjct: 14  SDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENRVLVRS 73

Query: 75  IIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADN 134
           ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQKQRWYI DN
Sbjct: 74  LMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDN 133

Query: 135 GVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLW 194
           GVYSKLIS+MGKKGQ RMAMWLFSEM+NSGCRPD SVYNALITAHLH++DKAKAL KV  
Sbjct: 134 GVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRG 193

Query: 195 YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAY 254
           Y +KMKG+ERC+PN+VTYNIL RAFAQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAY
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253

Query: 255 GKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTL 314
           GKNG IKEME +L RM+SN+ KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTL
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313

Query: 315 PTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDG 374
           PTFNSMI NYGKAR+ DKAE VF+KM DM Y PS++T E +IMMYG+C  VS+AREIF+ 
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373

Query: 375 MVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKLLYKAYTKADM 434
           +  S + ++ STLNAML+VYC NGL  EAD LF +A   +V PD++TYK LYKAYTKADM
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADM 433

Query: 435 KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSESSVEKQSSSR 494
           KE ++ L+K M+K GI+PNKRFFL+AL   GS           +GS N +S+     SSR
Sbjct: 434 KEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-------RLPGSGSENRKST----RSSR 493

Query: 495 TRSGPRNLESN 502
           +R  P+    N
Sbjct: 494 SRDSPKGRGGN 493

[Close]
BLAST of Cmc08g0215801 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 8.5e-168
Identity = 300/465 (64.52%), Postives = 368/465 (79.14%), Query Frame = 0 

Query: 41  STRVVCVSTR-------PSRKSGVKTDRSEAEELVRGIIKKFS-DKEPLLKTLDKYVRVM 100
           +TR V ++ R       P+   GV    +EA ELVR ++++ +  KE L+  LD++VRV+
Sbjct: 27  ATRHVALAARSKRRGAGPAAAEGVDEAAAEAAELVRSLLRRTAGGKERLVPVLDRHVRVV 86

Query: 101 RTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWL 160
           RTEHCFLLFEELG+RD WLQCL+VFRWMQKQRWY+ADNG+YSKLIS+MG+KGQIRMAMWL
Sbjct: 87  RTEHCFLLFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWL 146

Query: 161 FSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILT 220
           FS+MRNSGC+PDTSVYN+LI AHLHS+DK KAL K L YFEKMK +ERC+P IVTYNIL 
Sbjct: 147 FSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILL 206

Query: 221 RAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIK 280
           RAFAQA    QV+ LFKDLDESVVS D+YTYNGV+DAYGKNG IKEME +L RMKS Q +
Sbjct: 207 RAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCR 266

Query: 281 PDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRDKAEEV 340
           PD+I+FN+LIDSYG+KQ FDKMEQVFKSLLRSKERPT PTFNSMITNYG+ARLR+KAE V
Sbjct: 267 PDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESV 326

Query: 341 FRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCI 400
             KM+++G+ P+YVT E LI+MY HCDCVSKAR++FD +V S  +V +S+LN+ML+ YC+
Sbjct: 327 VEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCM 386

Query: 401 NGLPFEADMLFESAGNMKVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRF 460
           NGL  EAD L ++A    V P+ +TYKLLYKAYTKA+ K L++KLLK M+K GI+PNK+F
Sbjct: 387 NGLHTEADRLLDTALQQCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKF 446

Query: 461 FLDALGTIGSSREKPEPARTKTGSRN-SESSVEKQSSSRTRSGPR 497
           FLDAL   G+S  KP   RT  G  + S+ S +    S T +  +
Sbjct: 447 FLDALEAFGTSDRKP---RTSPGINSASKPSTDSAGDSETATSDK 488

[Close]
BLAST of Cmc08g0215801 vs. ExPASy Swiss-Prot
Match: A3ABE1 (Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0750400 PE=3 SV=2)

HSP 1 Score: 590.1 bits (1520), Expect = 2.5e-167
Identity = 291/437 (66.59%), Postives = 353/437 (80.78%), Query Frame = 0 

Query: 60  DRSEAEELVRGIIKKFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFR 119
           + +EA +LVR  +++ S  KE L+  LD++V+V+RTEHCFLLFEELG+RD WLQCLEVFR
Sbjct: 50  EAAEAADLVRFFLRRTSGGKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEVFR 109

Query: 120 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 179
           WMQKQRWY+ADNG+YSKLIS+MG+KGQIRMAMWLFS+MRNSGCRPDTSVYN+LI  HLHS
Sbjct: 110 WMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHS 169

Query: 180 KDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSA 239
           +DK+KAL K L YFEKMK ++RC+PNIVTYNIL RAFAQA    Q++ LFKDLDES VS 
Sbjct: 170 RDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSP 229

Query: 240 DIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVF 299
           DIYTYNGVMDAYGKNG I EME +L RMKSNQ +PD+I+FN+LIDSYG+KQ FDKMEQVF
Sbjct: 230 DIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVF 289

Query: 300 KSLLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 359
           KSLLRSKE+PT PTFNSMITNYGKARLR+KAE V  KM +MG+ P+YVT E LIMMY +C
Sbjct: 290 KSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYC 349

Query: 360 DCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTY 419
           DCVS+AR+IFD +V+S   V +S++NAMLD YC+NGLP EAD L +S       P ++TY
Sbjct: 350 DCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTY 409

Query: 420 KLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRN 479
           KLLYKAYTKA+ K+L++KLLK M+  GI+PNK+FFLDAL   G++ +KP    +K  +  
Sbjct: 410 KLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNTDKKPRTVPSKNSASK 469

Query: 480 SESSVEKQSSSRTRSGP 496
            +      S + T S P
Sbjct: 470 PDVESANNSGTDTSSKP 486

[Close]
BLAST of Cmc08g0215801 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.2e-39
Identity = 100/354 (28.25%), Postives = 175/354 (49.44%), Query Frame = 0 

Query: 103 ELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 162
           +L  + +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P++ TY+ L +A   A++
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFN 282
            D V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276

Query: 283 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDM 342
           +++  +G     D ME  ++        P   TFN +I +YGK R+ DK   V   M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336

Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEA 402
            +  +  T  ++I  +            FD M + G +    T   +++ Y   GL  + 
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396

Query: 403 DMLFESAGNMKVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFF 454
               + A   ++  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]
BLAST of Cmc08g0215801 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.1e-37
Identity = 105/380 (27.63%), Postives = 171/380 (45.00%), Query Frame = 0 

Query: 102 EELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 161
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 66  DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 125

Query: 162 RPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 221
           +P   VY +LI+ +     K++ L K     E MK +  CKP++ T+ +L     +  + 
Sbjct: 126 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 185

Query: 222 DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLA----------------- 281
           D V ++  ++    V     TYN ++D YGK G  +EME +LA                 
Sbjct: 186 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 245

Query: 282 -------------------RMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSK 341
                              R +   ++PDI +FN+LI S+GK  ++ KM  V   + +  
Sbjct: 246 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 305

Query: 342 ERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAR 401
              T  T+N +I  +GKA   +K ++VFRKMK  G  P+ +T  SL+  Y     V K  
Sbjct: 306 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 365

Query: 402 EIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKLLYKAY 446
            +   +VNS   +     N +++ Y   G       L+      K  PD  T+  + K Y
Sbjct: 366 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 425

[Close]
BLAST of Cmc08g0215801 vs. ExPASy TrEMBL
Match: A0A5A7T266 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00650 PE=3 SV=1)

HSP 1 Score: 1040.8 bits (2690), Expect = 2.0e-300
Identity = 530/531 (99.81%), Postives = 530/531 (99.81%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLSLSPQFSPIFTTSYSSSRTSQLSRLW PVPSSLKKTFSTRVVCVSTRPSRKSGVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWFPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]
BLAST of Cmc08g0215801 vs. ExPASy TrEMBL
Match: A0A5D3CMK0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002480 PE=3 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 9.7e-300
Identity = 530/531 (99.81%), Postives = 530/531 (99.81%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTR SRKSGVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]
BLAST of Cmc08g0215801 vs. ExPASy TrEMBL
Match: A0A1S3B2D9 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485009 PE=3 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 9.7e-300
Identity = 530/531 (99.81%), Postives = 530/531 (99.81%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTR SRKSGVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]
BLAST of Cmc08g0215801 vs. ExPASy TrEMBL
Match: A0A0A0KGV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1)

HSP 1 Score: 986.1 bits (2548), Expect = 5.7e-284
Identity = 504/531 (94.92%), Postives = 515/531 (96.99%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLS S QFSP FT SYSS   SQLSRLWLP+PSS+KK  STRVVC+STRPSRK GVKTD
Sbjct: 1   MPLSFSLQFSPTFTPSYSS---SQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]
BLAST of Cmc08g0215801 vs. ExPASy TrEMBL
Match: A0A6J1GGN3 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453772 PE=3 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.2e-260
Identity = 461/531 (86.82%), Postives = 483/531 (90.96%), Query Frame = 0 

Query: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
           MPLS S QFSP FT   SSSR  QLS+ WLP+P SL++  STRVVC+STRP+RKS  KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           RSE EELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR++AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 532
           SSVE                   KPISSR R GSR LES V+NHAPELGLA
Sbjct: 481 SSVE-------------------KPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]
BLAST of Cmc08g0215801 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 601.7 bits (1550), Expect = 5.8e-172
Identity = 310/491 (63.14%), Postives = 376/491 (76.58%), Query Frame = 0 

Query: 15  TSYSSSRTSQLSRLWLPVPSSL---KKTFSTRVVCVSTRPSRKSGVK-TDRSEAEELVRG 74
           + + SS   +    WL    +L   +++  TR+ C +    RK   + +   E   LVR 
Sbjct: 14  SDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENRVLVRS 73

Query: 75  IIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADN 134
           ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQKQRWYI DN
Sbjct: 74  LMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDN 133

Query: 135 GVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLW 194
           GVYSKLIS+MGKKGQ RMAMWLFSEM+NSGCRPD SVYNALITAHLH++DKAKAL KV  
Sbjct: 134 GVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRG 193

Query: 195 YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAY 254
           Y +KMKG+ERC+PN+VTYNIL RAFAQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAY
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253

Query: 255 GKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTL 314
           GKNG IKEME +L RM+SN+ KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTL
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313

Query: 315 PTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDG 374
           PTFNSMI NYGKAR+ DKAE VF+KM DM Y PS++T E +IMMYG+C  VS+AREIF+ 
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373

Query: 375 MVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKLLYKAYTKADM 434
           +  S + ++ STLNAML+VYC NGL  EAD LF +A   +V PD++TYK LYKAYTKADM
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADM 433

Query: 435 KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSESSVEKQSSSR 494
           KE ++ L+K M+K GI+PNKRFFL+AL   GS           +GS N +S+     SSR
Sbjct: 434 KEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-------RLPGSGSENRKST----RSSR 493

Query: 495 TRSGPRNLESN 502
           +R  P+    N
Sbjct: 494 SRDSPKGRGGN 493

[Close]
BLAST of Cmc08g0215801 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 601.7 bits (1550), Expect = 5.8e-172
Identity = 310/491 (63.14%), Postives = 376/491 (76.58%), Query Frame = 0 

Query: 15  TSYSSSRTSQLSRLWLPVPSSL---KKTFSTRVVCVSTRPSRKSGVK-TDRSEAEELVRG 74
           + + SS   +    WL    +L   +++  TR+ C +    RK   + +   E   LVR 
Sbjct: 14  SDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENRVLVRS 73

Query: 75  IIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADN 134
           ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQKQRWYI DN
Sbjct: 74  LMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDN 133

Query: 135 GVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLW 194
           GVYSKLIS+MGKKGQ RMAMWLFSEM+NSGCRPD SVYNALITAHLH++DKAKAL KV  
Sbjct: 134 GVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRG 193

Query: 195 YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAY 254
           Y +KMKG+ERC+PN+VTYNIL RAFAQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAY
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253

Query: 255 GKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTL 314
           GKNG IKEME +L RM+SN+ KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTL
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313

Query: 315 PTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDG 374
           PTFNSMI NYGKAR+ DKAE VF+KM DM Y PS++T E +IMMYG+C  VS+AREIF+ 
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373

Query: 375 MVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKLLYKAYTKADM 434
           +  S + ++ STLNAML+VYC NGL  EAD LF +A   +V PD++TYK LYKAYTKADM
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADM 433

Query: 435 KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSESSVEKQSSSR 494
           KE ++ L+K M+K GI+PNKRFFL+AL   GS           +GS N +S+     SSR
Sbjct: 434 KEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-------RLPGSGSENRKST----RSSR 493

Query: 495 TRSGPRNLESN 502
           +R  P+    N
Sbjct: 494 SRDSPKGRGGN 493

[Close]
BLAST of Cmc08g0215801 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 166.0 bits (419), Expect = 8.2e-41
Identity = 100/354 (28.25%), Postives = 175/354 (49.44%), Query Frame = 0 

Query: 103 ELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 162
           +L  + +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P++ TY+ L +A   A++
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFN 282
            D V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276

Query: 283 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDM 342
           +++  +G     D ME  ++        P   TFN +I +YGK R+ DK   V   M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336

Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEA 402
            +  +  T  ++I  +            FD M + G +    T   +++ Y   GL  + 
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396

Query: 403 DMLFESAGNMKVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFF 454
               + A   ++  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]
BLAST of Cmc08g0215801 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 6.5e-38
Identity = 105/381 (27.56%), Postives = 171/381 (44.88%), Query Frame = 0 

Query: 102 EELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 161
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 116 DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 175

Query: 162 RPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 221
           +P   VY +LI+ +     K++ L K     E MK +  CKP++ T+ +L     +  + 
Sbjct: 176 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 235

Query: 222 DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLA----------------- 281
           D V ++  ++    V     TYN ++D YGK G  +EME +LA                 
Sbjct: 236 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 295

Query: 282 -------------------RMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSK 341
                              R +   ++PDI +FN+LI S+GK  ++ KM  V   + +  
Sbjct: 296 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 355

Query: 342 ERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAR 401
              T  T+N +I  +GKA   +K ++VFRKMK  G  P+ +T  SL+  Y     V K  
Sbjct: 356 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 415

Query: 402 EIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKLLYKAY 447
            +   +VNS   +     N +++ Y   G       L+      K  PD  T+  + K Y
Sbjct: 416 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 475

[Close]
BLAST of Cmc08g0215801 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 5.5e-37
Identity = 134/498 (26.91%), Postives = 229/498 (45.98%), Query Frame = 0 

Query: 3   LSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRPSRKSGVKTDRS 62
           +S+SP+      TS  S+ TS      L +  + +  +      V+ R S++  +K D++
Sbjct: 30  ISISPREPNYAITSDKSNNTS------LSLRETRQSKWLINAEDVNERDSKE--IKEDKN 89

Query: 63  ---EAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRD---KWLQCLEV 122
               + + +  I+++ + K  + K       + RT     + E L +R    +W   ++V
Sbjct: 90  TKIASRKAISIILRREATKSIIEKKKGSKKLLPRT-----VLESLHERITALRWESAIQV 149

Query: 123 FRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHL 182
           F  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY AL++A+ 
Sbjct: 150 FELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYS 209

Query: 183 HSK--DKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDES 242
            S   D A  L+      E+MK    C+P++ TY+IL ++F Q    D+V  L  D+   
Sbjct: 210 RSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 269

Query: 243 VVSADIYTYNGVMDAYGK------------------------------------NGNIKE 302
            +  +  TYN ++DAYGK                                    NG I+ 
Sbjct: 270 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 329

Query: 303 MELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMIT 362
           ME    + +S+ I+P+I +FN+L+DSYGK   + KM  V + + +     T+ T+N +I 
Sbjct: 330 MENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVID 389

Query: 363 NYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEV 422
            +G+A    + E +FR M+     PS VT  SL+  YG      K   +   + NS   +
Sbjct: 390 AFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRL 449

Query: 423 RVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKLLYKAYTKADMKELLEKL- 454
            +   N ++D Y       E   + E        PD  TY+ + KAY  + M   +++L 
Sbjct: 450 DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELH 508

The following BLAST results are available for this feature:
BLAST of Cmc08g0215801 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0036266.14.0e-30099.81pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008440667.12.0e-29999.81PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ... [more]
XP_004143565.11.2e-28394.92pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic [Cucumis... [more]
XP_023543919.11.7e-26187.19pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ... [more]
KAG7034169.13.7e-26187.19Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper... [more]
BLAST of Cmc08g0215801 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SV968.2e-17163.14Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
A7LN878.5e-16864.52Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4... [more]
A3ABE12.5e-16766.59Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza... [more]
Q9SQU61.2e-3928.25Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
Q9SCP44.1e-3727.63Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... [more]
BLAST of Cmc08g0215801 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T2662.0e-30099.81Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3CMK09.7e-30099.81Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B2D99.7e-30099.81pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis ... [more]
A0A0A0KGV85.7e-28494.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1[more]
A0A6J1GGN31.2e-26086.82pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit... [more]
BLAST of Cmc08g0215801 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39620.15.8e-17263.14Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39620.25.8e-17263.14Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G06430.18.2e-4128.25Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G53170.16.5e-3827.56Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48730.15.5e-3726.91Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 307..510
e-value: 9.0E-30
score: 106.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 234..305
e-value: 5.6E-16
score: 60.6
coord: 63..233
e-value: 9.5E-36
score: 125.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 382..404
e-value: 0.0021
score: 18.2
coord: 346..375
e-value: 0.01
score: 16.0
coord: 312..340
e-value: 2.8E-6
score: 27.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 227..287
e-value: 7.3E-11
score: 42.0
coord: 152..215
e-value: 3.4E-9
score: 36.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 132..165
e-value: 2.8E-5
score: 22.0
coord: 241..275
e-value: 1.4E-8
score: 32.4
coord: 312..344
e-value: 2.9E-7
score: 28.3
coord: 276..309
e-value: 1.7E-5
score: 22.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..273
score: 11.662881
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 129..163
score: 11.443655
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 414..448
score: 9.218511
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 309..343
score: 11.629997
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 274..308
score: 10.128299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..531
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..519
NoneNo IPR availablePANTHERPTHR47874:SF3BNAA01G05620D PROTEINcoord: 36..478
IPR044179Pentatricopeptide repeat-containing protein PPR5-likePANTHERPTHR47874EXPRESSED PROTEINcoord: 36..478

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0215801.1Cmc08g0215801.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding