Cmc08g0214271 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0214271
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Epidermal patterning factor-like protein
Location	CMiso1.1chr08: 4493077 .. 4494850 (+)
RNA-Seq Expression	Cmc08g0214271
Synteny	Cmc08g0214271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACATAATAATAAATTTATTGATTTTTTTTTTTTTTTTTATATCAATGGAAAAATTTATAATTTGAGTATGATATTTTGTTATCAATGCAACGAAGCTAGCTTCAAGCTCCATGGCAAGAAATGAATCCAAGTGATGAAGAAGATTGAGATTGGGGTAATTGAAGTGTGGAGAGGGAGGTAAGAGGATGTTAAAAGAAGAAGCCTAATGAAAGGAGATGCAATAATTATATTGTTGGAGGGTATGTCAGCAATTGTGAGAAATGACAGGCCAATTCATGGTTGCCAAAATCTTGTAGTCACTCTCTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATTAGGTGGAAGTGTTCAGAACGAAACTCACAAGAAAACTCAAATTCCCAAACTTAAAACCAAAACAATTAACAAATCTCTCTGTTTCTTGCTTTCTTTTTCTTTGTTTTTTTAAGAGAAGAAAGAGAAACGAAAACGATATATCCCACTCTCTCACTCTGCTGCCATTGCAAAATTTGGTCTGTTCTTTTTTTTTTTTTTTTTACCATTGGCCTCCTCCTTTTTTTCTCTTCTCTATCATCAATTATTTTTATTACAATTGCAAAATTTACAACCCCCTTTTCCCACCAATTTTATTTTTCTGTTGGGTTATGGTTTCTGGAGGCTCTTCTTTCGAGTTCTGAACTTTTTGGTACTCTCTCTTTCTTTCTTTTTCTTTGTCTTCCACGTTCCATCATCTCAAATATCTTTCCCACACTAACACAGATTCAGACCAAATTATATATATATTATATACACGTACGAGCAGTATAGAGTGCAAATTCAGAAGCTAATCTCATCCATTCTGATTTAACTCACACTTCATTCCTTCACCCATACACTTTTTTTTTTTTTTTGCTTTCTATCTGATAACCTTTTTTTGCTTAGTTTTATTTTAAACCTCCTCTTCTCTAGGGAGAATTTCCTGTCTCTTTCACATTCTGGCTTCTCTTTCTCCCTCTCTCTCTCTTTGTGAGAAGAGAAGGAAAAAGAAAAAAATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGAATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGTATCGACCCAGATGAGATTCATGGCTGAAGGTAAATGGGTATCTTTTGAATTTTCAGAAGGGAGTTCAGAACTATATTTTTATTCTTCAATTTCATTTTTTGTTTAACCGAGCAGTTTTTTTTCCTTGCAGGAAGATTTATTTCAAGGAACGGCAAGGTCAGTCCAGAAACCATCTCTTTTCTTACTTTCTCTAATGCTTTACTGTTTTTGTGTGGAAGCTAAATTGATTGAGAAGAATATTAATTTTGGGTTTTTTTTGGTGGATTGTTGGGATAGACAGTGAATAATAGTGAAGATAAAATGGTATTAAGAGGACAAATTGGGTCAAGACCACCAAAATGTGAGAGAAGATGTAGCTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCTTCCAATTACAAGCCTATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAAAAACACCCTTCCTCCACTAATCTCTTTCTCTGTAAATTAGTGATTATCATTATATATATGATTGTTAATTTCTTCAACTTAACATCTCCGATTTCTCTCTCACTCTCTCGTTTTAGT

mRNA sequence

TTACATAATAATAAATTTATTGATTTTTTTTTTTTTTTTTATATCAATGGAAAAATTTATAATTTGAGTATGATATTTTGTTATCAATGCAACGAAGCTAGCTTCAAGCTCCATGGCAAGAAATGAATCCAAGTGATGAAGAAGATTGAGATTGGGGTAATTGAAGTGTGGAGAGGGAGGTAAGAGGATGTTAAAAGAAGAAGCCTAATGAAAGGAGATGCAATAATTATATTGTTGGAGGGTATGTCAGCAATTGTGAGAAATGACAGGCCAATTCATGGTTGCCAAAATCTTGTAGTCACTCTCTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATTAGGTGGAAGTGTTCAGAACGAAACTCACAAGAAAACTCAAATTCCCAAACTTAAAACCAAAACAATTAACAAATCTCTCTGTTTCTTGCTTTCTTTTTCTTTGTTTTTTTAAGAGAAGAAAGAGAAACGAAAACGATATATCCCACTCTCTCACTCTGCTGCCATTGCAAAATTTGGTCTGTTCTTTTTTTTTTTTTTTTTACCATTGGCCTCCTCCTTTTTTTCTCTTCTCTATCATCAATTATTTTTATTACAATTGCAAAATTTACAACCCCCTTTTCCCACCAATTTTATTTTTCTGTTGGGTTATGGTTTCTGGAGGCTCTTCTTTCGAGTTCTGAACTTTTTGGTACTCTCTCTTTCTTTCTTTTTCTTTGTCTTCCACGTTCCATCATCTCAAATATCTTTCCCACACTAACACAGATTCAGACCAAATTATATATATATTATATACACGTACGAGCAGTATAGAGTGCAAATTCAGAAGCTAATCTCATCCATTCTGATTTAACTCACACTTCATTCCTTCACCCATACACTTTTTTTTTTTTTTTGCTTTCTATCTGATAACCTTTTTTTGCTTAGTTTTATTTTAAACCTCCTCTTCTCTAGGGAGAATTTCCTGTCTCTTTCACATTCTGGCTTCTCTTTCTCCCTCTCTCTCTCTTTGTGAGAAGAGAAGGAAAAAGAAAAAAATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGAATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGTATCGACCCAGATGAGATTCATGGCTGAAGGAAGATTTATTTCAAGGAACGGCAAGACAGTGAATAATAGTGAAGATAAAATGGTATTAAGAGGACAAATTGGGTCAAGACCACCAAAATGTGAGAGAAGATGTAGCTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCTTCCAATTACAAGCCTATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAAAAACACCCTTCCTCCACTAATCTCTTTCTCTGTAAATTAGTGATTATCATTATATATATGATTGTTAATTTCTTCAACTTAACATCTCCGATTTCTCTCTCACTCTCTCGTTTTAGT

Coding sequence (CDS)

ATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGAATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGTATCGACCCAGATGAGATTCATGGCTGAAGGAAGATTTATTTCAAGGAACGGCAAGACAGTGAATAATAGTGAAGATAAAATGGTATTAAGAGGACAAATTGGGTCAAGACCACCAAAATGTGAGAGAAGATGTAGCTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCTTCCAATTACAAGCCTATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAA

Protein sequence

MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP

Homology

[Close]

BLAST of Cmc08g0214271 vs. NCBI nr
Match: XP_008440444.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo] >KAA0036385.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa] >TYK12781.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 275.8 bits (704), Expect = 1.9e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of Cmc08g0214271 vs. NCBI nr
Match: XP_004143420.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 5.7e-70
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of Cmc08g0214271 vs. NCBI nr
Match: XP_038882800.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 5.9e-59
Identity = 118/131 (90.08%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGV+G RSR ILC  VSLLFFLIL STQMRFMAEGR ISRNGKTVN+ EDK+V
Sbjct: 1   MGCEC-NNGVMGSRSR-ILCSTVSLLFFLILASTQMRFMAEGRLISRNGKTVND-EDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS  KNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSAIKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 128

[Close]

BLAST of Cmc08g0214271 vs. NCBI nr
Match: XP_038882801.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 7.9e-56
Identity = 114/131 (87.02%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGV+G RSR ILC  VSLLFFLIL STQMRFMAEGR ISRN     N EDK+V
Sbjct: 1   MGCEC-NNGVMGSRSR-ILCSTVSLLFFLILASTQMRFMAEGRLISRN----VNDEDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS  KNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSAIKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 125

[Close]

BLAST of Cmc08g0214271 vs. NCBI nr
Match: XP_022963149.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-52
Identity = 111/131 (84.73%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIG RSR ILC  VS LFFLIL STQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 55  MGCECNNNGVIG-RSR-ILCATVSFLFFLILASTQMRFMAEGRSISKSGKTV--SEDKVV 114

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK     SS MKNIAYARDEASNYKPMSW
Sbjct: 115 LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSAMKNIAYARDEASNYKPMSW 174

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 175 KCKCGSLIFNP 176

[Close]

BLAST of Cmc08g0214271 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 25  LLFFLILVSTQMRFMAEGRFISRNGK-TVNNSED-KMVLRGQIGSRPPKCER-RCSWCGH 84
           LL  LIL ST    MA GR    + + T +  +D KM++RG IGSRPP+CER RC  CGH
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 70

Query: 85  CEAIQVPANPQ-------KSGTKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 132
           CEAIQVP NPQ        + + +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 71  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of Cmc08g0214271 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.9e-09
Identity = 36/126 (28.57%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 14  RSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMVLRGQIGSRPPKCE 73
           +S ++L P++ +L     VS+         F+      ++     +  + ++GS PP C 
Sbjct: 6   KSTLLLLPLILILLITPQVSS---------FLQPIQPPISPQVALIEDKARLGSTPPSCH 65

Query: 74  RRCSWCGHCEAIQVPANPQKSGTKNSSTM--------KNIAYARDEASNYKPMSWKCKCG 132
            RC+ C  C AIQVP  P +S     +           ++    D+ SNYKPM WKC C 
Sbjct: 66  NRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCN 122

[Close]

BLAST of Cmc08g0214271 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 54  NSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEAS 113
           N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +
Sbjct: 46  NKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYA 104

Query: 114 NYKPMSWKCKC 125
           NY+P  W+C C
Sbjct: 106 NYQPEGWRCHC 104

[Close]

BLAST of Cmc08g0214271 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-06
Identity = 38/125 (30.40%), Postives = 52/125 (41.60%), Query Frame = 0


Query: 9   GVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFI-SRNGKTVNNSEDKMVLR-GQIG 68
           G   RR R +L  +V+    L L S      A+GR+I  R G  +     +   R G  G
Sbjct: 2   GTFRRRRRFLLAALVTFA-LLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRFGGPG 61

Query: 69  SRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGS 128
           S PP C  +C  C  C+ + VP  P  S                    Y P +W+CKCG+
Sbjct: 62  SSPPTCRSKCGKCQPCKPVHVPIQPGLS----------------MPLEYYPEAWRCKCGN 109

Query: 129 LIFNP 132
            +F P
Sbjct: 122 KLFMP 109

[Close]

BLAST of Cmc08g0214271 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-04
Identity = 22/69 (31.88%), Postives = 29/69 (42.03%), Query Frame = 0


Query: 63  GQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKC 122
           G  GS PP C  +C  C  C+A+ VP  P                       Y P +W+C
Sbjct: 55  GGPGSVPPMCRLKCGKCEPCKAVHVPIQP----------------GLIMPLEYYPEAWRC 107

Query: 123 KCGSLIFNP 132
           KCG+ +F P
Sbjct: 115 KCGNKLFMP 107

[Close]

BLAST of Cmc08g0214271 vs. ExPASy TrEMBL
Match: A0A5A7T4J5 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003700 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 9.4e-71
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of Cmc08g0214271 vs. ExPASy TrEMBL
Match: A0A1S3B1V9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484886 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 9.4e-71
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of Cmc08g0214271 vs. ExPASy TrEMBL
Match: A0A0A0KGK0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G497000 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-70
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]

BLAST of Cmc08g0214271 vs. ExPASy TrEMBL
Match: A0A6J1HJ94 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463445 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 111/131 (84.73%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIG RSR ILC  VS LFFLIL STQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 55  MGCECNNNGVIG-RSR-ILCATVSFLFFLILASTQMRFMAEGRSISKSGKTV--SEDKVV 114

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK     SS MKNIAYARDEASNYKPMSW
Sbjct: 115 LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSAMKNIAYARDEASNYKPMSW 174

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 175 KCKCGSLIFNP 176

[Close]

BLAST of Cmc08g0214271 vs. ExPASy TrEMBL
Match: A0A6J1KNP8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.4e-52
Identity = 109/131 (83.21%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIGR    ILC  VS LF LIL STQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 30  MGCECNNNGVIGRCR--ILCATVSFLFLLILASTQMRFMAEGRSISKSGKTV--SEDKVV 89

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQK     SSTMKNIAYARDEASNYKPMSW
Sbjct: 90  LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSW 149

Query: 121 KCKCGSLIFNP 132
           KCKCGSLIFNP
Sbjct: 150 KCKCGSLIFNP 151

[Close]

BLAST of Cmc08g0214271 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 8.5e-24
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 25  LLFFLILVSTQMRFMAEGRFISRNGK-TVNNSED-KMVLRGQIGSRPPKCER-RCSWCGH 84
           LL  LIL ST    MA GR    + + T +  +D KM++RG IGSRPP+CER RC  CGH
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 70

Query: 85  CEAIQVPANPQ-------KSGTKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 132
           CEAIQVP NPQ        + + +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 71  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]

BLAST of Cmc08g0214271 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 7.0e-10
Identity = 36/126 (28.57%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 14  RSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMVLRGQIGSRPPKCE 73
           +S ++L P++ +L     VS+         F+      ++     +  + ++GS PP C 
Sbjct: 6   KSTLLLLPLILILLITPQVSS---------FLQPIQPPISPQVALIEDKARLGSTPPSCH 65

Query: 74  RRCSWCGHCEAIQVPANPQKSGTKNSSTM--------KNIAYARDEASNYKPMSWKCKCG 132
            RC+ C  C AIQVP  P +S     +           ++    D+ SNYKPM WKC C 
Sbjct: 66  NRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCN 122

[Close]

BLAST of Cmc08g0214271 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 54  NSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEAS 113
           N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +
Sbjct: 46  NKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYA 104

Query: 114 NYKPMSWKCKC 125
           NY+P  W+C C
Sbjct: 106 NYQPEGWRCHC 104

[Close]

BLAST of Cmc08g0214271 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07
Identity = 38/125 (30.40%), Postives = 52/125 (41.60%), Query Frame = 0


Query: 9   GVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFI-SRNGKTVNNSEDKMVLR-GQIG 68
           G   RR R +L  +V+    L L S      A+GR+I  R G  +     +   R G  G
Sbjct: 2   GTFRRRRRFLLAALVTFA-LLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRFGGPG 61

Query: 69  SRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGS 128
           S PP C  +C  C  C+ + VP  P  S                    Y P +W+CKCG+
Sbjct: 62  SSPPTCRSKCGKCQPCKPVHVPIQPGLS----------------MPLEYYPEAWRCKCGN 109

Query: 129 LIFNP 132
            +F P
Sbjct: 122 KLFMP 109

[Close]

BLAST of Cmc08g0214271 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 44.7 bits (104), Expect = 6.8e-05
Identity = 22/69 (31.88%), Postives = 29/69 (42.03%), Query Frame = 0


Query: 63  GQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKC 122
           G  GS PP C  +C  C  C+A+ VP  P                       Y P +W+C
Sbjct: 55  GGPGSVPPMCRLKCGKCEPCKAVHVPIQP----------------GLIMPLEYYPEAWRC 107

Query: 123 KCGSLIFNP 132
           KCG+ +F P
Sbjct: 115 KCGNKLFMP 107

The following BLAST results are available for this feature:

BLAST of Cmc08g0214271 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440444.1	1.9e-70	100.00	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo] >KAA0036385...	[more]
XP_004143420.1	5.7e-70	99.24	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus]	[more]
XP_038882800.1	5.9e-59	90.08	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida]	[more]
XP_038882801.1	7.9e-56	87.02	EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida]	[more]
XP_022963149.1	3.1e-52	84.73	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]	[more]

BLAST of Cmc08g0214271 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T068	1.2e-22	51.69	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	9.9e-09	28.57	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
C4B8C4	1.9e-07	36.62	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	4.6e-06	30.40	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	9.5e-04	31.88	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Cmc08g0214271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4J5	9.4e-71	100.00	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B1V9	9.4e-71	100.00	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484886...	[more]
A0A0A0KGK0	2.7e-70	99.24	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G497...	[more]
A0A6J1HJ94	1.5e-52	84.73	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KNP8	3.4e-52	83.21	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Cmc08g0214271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37810.1	8.5e-24	51.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G10310.1	7.0e-10	28.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13898.1	1.3e-08	36.62	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT4G14723.1	3.3e-07	30.40	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	6.8e-05	31.88	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 64..131 e-value: 5.6E-17 score: 61.5
None	No IPR available	PANTHER	PTHR33109:SF71	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2	coord: 7..131
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 7..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0214271.1	Cmc08g0214271.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane