Cmc08g0212871 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0212871
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	eukaryotic initiation factor 4A-I isoform X1
Location	CMiso1.1chr08: 3603555 .. 3606791 (-)
RNA-Seq Expression	Cmc08g0212871
Synteny	Cmc08g0212871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTCGTCATACTCATAAGTCATAATATCTCAAACTTGGAAGCAAACGGACAAGGGCGCTGTGCTGTAGCGCAGCGACCATGGCAATCGATCCAATTGAAGCATTCTCGCCTCCCTCTCACTCATCTTCCCATTTCAGGTATTGGGGTTGCTTCTTCCACCTCTTGAATTTTACAAACTTGTTTCTCCATATTCATCAATCCCCATTTTGTTTCACTTTCTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGATAGGCTCCAGTTTAAGATGGTCTCCTTCTCTCAATCTATGCTCATACACATATCTTTGATTCAAAGTTCAATGTTTAGTTGAAATTTTTTGTTGGGTTGTAATTTGCTTGGTCAATTTCTTTTCTGTTCCTTCTGTGCGTTGTGTTTTGGCAGGAAACCTTAGTGGGCTTGTTGGACGTGGCCGGTCGCCGTCCGTCGTTGCCGATGATTGTGTGTTGTAGTTCTCGTGACGAACTCGATTCTGTCTGCTCCGCCGTCTCCAACCTCCAATACATCTCATTGGCCTCTTTGGTATCGTTATTTCTGCTCAATTACCTCTTCTAGCTGAAATTCTGAAATTGTTCTAGAAATGCCCATGCCTGAGCCTGATATGCAATTCTTTTCTGCCACTCAACGAATAATTTGATCTCGAATCAATTACTGACCTGAATCGATCTTCAACGTATGAATTGCCAATGTGATAGGACACTTGGATTAGGAGTTGTGAACTCACCTTGAACAGATCAGTTCTATAGACTGTAATGTTTGTCCCGTCCTAGTTCTATAGATGAAGTGCTTTGATGGCTTGAGTGCTATCGATATAATTGAAAGCACTCATATTAATACACTTGGATCAGAATCTAATTATTTAATTTCAGTTGGTAATGAAAACCAACTGACGAAAGTTGAAATTAAACAATACAGATAATAAGTGTGCTATGTTAATTCAACTTAAGGAAGCCAGGTGACAGAAATTTTATCAGGTTAGAGTTAGAAATGATTTTAGGGCAGTAATTAAAGTGAGGGAATTTATTTTGGCGATTAGTTATAAGTAGAGTGAGTAAGAAAAGATGGAAGCAGGCAACTGTTTAGACAGATTTGGTGAGTGTGTTAATCAATAGAGAAGATGTTTCAAACTTTCTAGTACCTCAAACATTTTAGCTTATTATGTAGTTCTTTTGTATTTTATACTTATATATTATGCCAGTTATCCAGGTTCTATCACTTGTTTGCAACTTAGCGTACTTTTCTTTCCATGGCTGATTTTTGCTTACATGTGTATAATGTTATATTTTGACTCTTGTTGATATGGTTTATATATATATATATGTGAAAACAACAACTTTAACTCAGAAAAAAAATGGAAGTATACACGGGAATACAAAAAACTTATGTTGATGCAGTAGAGTAATGAGTTAATTATAACAGTTCAGTATAATTGTTTTAGTTTATTTTAAGTACTTAGATGTTAGATCCTACATAAATAGAGGATTAATATCTTGTATTAGCATACATTGAATTGTAATAAAGTCTTTCTAGTTATAATTCTTGGAGGATTCTCTGCTTGTGATTTTGGCTACACCACCCATTTTAATGCTTTTTTTTTTTGTTCAAAGCTAAGAAATTTTTGTATGCCTTCTGGGCAAGTGATGATTCGGTCACCCTATACAGTCTGTATGCCGTCAGTTGTTGTTCCTGTTGTTTGTTTTAAGATCAAATTTTTGCACTTGTTTCTACTTTCTTTTGCCAGGGGAAATTGCCCCTTTCTTTGATTAAAATCTTACACCGAGTACCATTTGTTTTCTTCCTTCTTCTAGTCATTACTCATGTTGGCATACATATGCGATAATGACAATTCTGTGATCACTCTGAGGATGGATGAGACTTACTGTATGACATTGATGAAATGTATTTATTCCTTGGCATATTCAGTACAGTGACCTTGCCGAAGCAGACCGTGCACTGATTTTAGAGAAATTTCGGCAAACAACATCAAGGTGGAGCCAAAAGTTCAGTTCTCTATCAGAAGAAAAATGTGAGGGTGAGAAAGTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCGCCTCTTTCTGCCCATGTTTTGATAAATTATGAGATACCAACAAAGAAGGTGCAGTTTTCAGACTACAGGACTATATGAACTGATAATTTTTAAAAATATGCATTAGATTATATCAATGGGTATGACAGTGATGTCCAGCAGAAGTTACAACTGGTTTCTGCTTCACTCTAAATATAATATAACTTTTTATAGCCTCTGTATTGCTCCTGATGTGCATCTGAAATCATTTTTCAACCATTTGAATTGTGGTTGTAGCTCTGTGTTTCGAACTTCGATTTCTATGAATAAATTGCATGTATAATGTATTGACTGTTCCTATTCCTGAGGTGGTACTGGTCAGTTCTTAAACAAACTTGTAATACCACATATTTGAAAAGTTGTATGAAGTAAACTCACAAGCAAATTGTTAATTTATTGTGACAGCACTCAGTGCTCCTAAACTTCATGTGGTTTTTATTGCAGGAAACATATATGAGGCGCATGACTACCTGCTCGGCCTCAGGTTGTTCTTTTATACTGCAACGGATTATAATATAAGTTGCCCAGTTTAGGTTTCTTCTTCATACACAAGAGTTGCTTCCTTTGCGTTTTTATGCAGATGGGATCTTGATCAACATGGTTGTTGGAGGAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAATAGTGGCCTTGTTATTGCTGAGATGCCCATTAATGTAAGTATATTACTACTTGCTTTCATCTCCATGTCTTTGATGGATATAAATTTTTGCTTAGGTAATCATTCTCAGATAATTATTCTGATATTAATTGGTCTTTTTCCTACAAAACAAAAAAGTCGAACTGAAGTTGGAAAGTTTGCAGATTTCTGAAATTTTGTAAGGATGTCGGCTACAGTGGAACATCTAAGGACAACACAGAAGGTTTGATTAGAAGGTGTTTTACCCCTACCAACTGATCATTGTCAATGATAACTTATGTTGGTTGATCTGTACTTGAGAGAATTTTCCAGTCTATTGAACAGGGGGCTATTTATTGAGAGAATGGAATGCTGAGATAATTTGGTGTTCAAATTTGGTTTATTTTTCTTTTCTAATATAGAAATTCAAGTTGGTAACCCTTTTT

mRNA sequence

GACTCGTCATACTCATAAGTCATAATATCTCAAACTTGGAAGCAAACGGACAAGGGCGCTGTGCTGTAGCGCAGCGACCATGGCAATCGATCCAATTGAAGCATTCTCGCCTCCCTCTCACTCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGATAGGCTCCAGTTTAAGATGGAAACCTTAGTGGGCTTGTTGGACGTGGCCGGTCGCCGTCCGTCGTTGCCGATGATTGTGTGTTGTAGTTCTCGTGACGAACTCGATTCTGTCTGCTCCGCCGTCTCCAACCTCCAATACATCTCATTGGCCTCTTTGTACAGTGACCTTGCCGAAGCAGACCGTGCACTGATTTTAGAGAAATTTCGGCAAACAACATCAAGGTGGAGCCAAAAGTTCAGTTCTCTATCAGAAGAAAAATGTGAGGGTGAGAAAGTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCGCCTCTTTCTGCCCATGTTTTGATAAATTATGAGATACCAACAAAGAAGGAAACATATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTGATCAACATGGTTGTTGGAGGAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAATAGTGGCCTTGTTATTGCTGAGATGCCCATTAATATTTCTGAAATTTTGTAAGGATGTCGGCTACAGTGGAACATCTAAGGACAACACAGAAGGTTTGATTAGAAGGTGTTTTACCCCTACCAACTGATCATTGTCAATGATAACTTATGTTGGTTGATCTGTACTTGAGAGAATTTTCCAGTCTATTGAACAGGGGGCTATTTATTGAGAGAATGGAATGCTGAGATAATTTGGTGTTCAAATTTGGTTTATTTTTCTTTTCTAATATAGAAATTCAAGTTGGTAACCCTTTTT

Coding sequence (CDS)

ATGGCAATCGATCCAATTGAAGCATTCTCGCCTCCCTCTCACTCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGATAGGCTCCAGTTTAAGATGGAAACCTTAGTGGGCTTGTTGGACGTGGCCGGTCGCCGTCCGTCGTTGCCGATGATTGTGTGTTGTAGTTCTCGTGACGAACTCGATTCTGTCTGCTCCGCCGTCTCCAACCTCCAATACATCTCATTGGCCTCTTTGTACAGTGACCTTGCCGAAGCAGACCGTGCACTGATTTTAGAGAAATTTCGGCAAACAACATCAAGGTGGAGCCAAAAGTTCAGTTCTCTATCAGAAGAAAAATGTGAGGGTGAGAAAGTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCGCCTCTTTCTGCCCATGTTTTGATAAATTATGAGATACCAACAAAGAAGGAAACATATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTGATCAACATGGTTGTTGGAGGAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAATAGTGGCCTTGTTATTGCTGAGATGCCCATTAATATTTCTGAAATTTTGTAA

Protein sequence

MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

Homology

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BLAST of Cmc08g0212871 vs. NCBI nr
Match: XP_008440274.1 (PREDICTED: eukaryotic initiation factor 4A-I isoform X1 [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKEIYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPINISEIL 212
           VVGGEVVTLKSIEENSGLVIAEMPINISEIL
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPINISEIL 211

[Close]

BLAST of Cmc08g0212871 vs. NCBI nr
Match: TYK12893.1 (ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 207
           VVGGEVVTLKSIEENSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 206

[Close]

BLAST of Cmc08g0212871 vs. NCBI nr
Match: XP_004141918.1 (eukaryotic initiation factor 4A-I isoform X3 [Cucumis sativus] >KGN48520.1 hypothetical protein Csa_002994 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 205/211 (97.16%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSS
Sbjct: 1   MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQTTSRWSQKFSSLSEEKCE E
Sbjct: 61  RDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPINISEIL 212
           VVGGEVVTLKSIEE+SGLVIAEMPINISEIL
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPINISEIL 211

[Close]

BLAST of Cmc08g0212871 vs. NCBI nr
Match: XP_008440275.1 (PREDICTED: ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKEIYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 207
           VVGGEVVTLKSIEENSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 206

[Close]

BLAST of Cmc08g0212871 vs. NCBI nr
Match: XP_031742372.1 (ATP-dependent RNA helicase eIF4A isoform X1 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSS
Sbjct: 1   MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQTTSRWSQKFSSLSEEKCE E
Sbjct: 61  RDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPINI 208
           VVGGEVVTLKSIEE+SGLVIAEMPIN+
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPINV 207

[Close]

BLAST of Cmc08g0212871 vs. ExPASy Swiss-Prot
Match: O02494 (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum OX=5807 GN=EIF4-A PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-13
Identity = 52/191 (27.23%), Postives = 94/191 (49.21%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           R FYV V++ ++KM+TL+ L +       +  I+ C++R  +D +   +    + + +S+
Sbjct: 245 RQFYVGVEKDEWKMDTLIDLYETL---TIVQAIIYCNTRRRVDQLTKQMRERDF-TCSSM 304

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ + DR +I+ +FR  +SR                       +++ TD    LLA G
Sbjct: 305 HGDMDQKDREVIMRQFRSGSSR-----------------------VLITTD----LLARG 364

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++INY++P   ETY+ R+         G+ IN V   ++V L+ IE +    I
Sbjct: 365 IDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNTQI 404

Query: 203 AEMPINISEIL 212
            EMP+ I++IL
Sbjct: 425 EEMPMGITDIL 404

[Close]

BLAST of Cmc08g0212871 vs. ExPASy Swiss-Prot
Match: Q4P331 (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=TIF1 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.5e-11
Identity = 46/191 (24.08%), Postives = 98/191 (51.31%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           + FYVAV++  +K++TL  L +          ++ C++R ++D +   +++ ++ +++++
Sbjct: 252 KQFYVAVEKEDWKLDTLCDLYETV---TITQAVIFCNTRRKVDWLTDKLTSREF-TVSAM 311

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ +A R +I+ +FR  +SR                       +++ TD    LLA G
Sbjct: 312 HGDMEQAQREVIMREFRSGSSR-----------------------VLITTD----LLARG 371

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++INY++P+ +E Y+ R+         G+ IN V   +V  L+ IE+     I
Sbjct: 372 IDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDIEQFYSTQI 411

Query: 203 AEMPINISEIL 212
            EMP+N+++++
Sbjct: 432 DEMPLNVADLI 411

[Close]

BLAST of Cmc08g0212871 vs. ExPASy Swiss-Prot
Match: A4QVP2 (ATP-dependent RNA helicase eIF4A OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=TIF1 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 45/191 (23.56%), Postives = 97/191 (50.79%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + +++++
Sbjct: 237 KQFYIAVEKEEWKLDTLSDLYETV---TITQAVIFCNTRRKVDWLTDKLTARDF-TVSAM 296

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ +A R LI+++FR  +SR                       +++ TD    LLA G
Sbjct: 297 HGDMDQAQRDLIMKEFRSGSSR-----------------------VLIATD----LLARG 356

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I
Sbjct: 357 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQI 396

Query: 203 AEMPINISEIL 212
            EMP+N+++++
Sbjct: 417 EEMPMNVADLI 396

[Close]

BLAST of Cmc08g0212871 vs. ExPASy Swiss-Prot
Match: Q7RV88 (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tif-1 PE=3 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 45/191 (23.56%), Postives = 97/191 (50.79%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + +++++
Sbjct: 238 KQFYIAVEKEEWKLDTLSDLYETV---TITQAVIFCNTRRKVDWLTDKLTARDF-TVSAM 297

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ +A R LI+++FR  +SR                       +++ TD    LLA G
Sbjct: 298 HGDMDQAQRDLIMKEFRSGSSR-----------------------VLIATD----LLARG 357

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I
Sbjct: 358 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQI 397

Query: 203 AEMPINISEIL 212
            EMP+N+++++
Sbjct: 418 EEMPMNVADLI 397

[Close]

BLAST of Cmc08g0212871 vs. ExPASy Swiss-Prot
Match: A1D7N3 (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=tif1 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-10
Identity = 44/191 (23.04%), Postives = 97/191 (50.79%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + +++++
Sbjct: 239 KQFYIAVEKEEWKLDTLSDLYETV---TITQAVIFCNTRRKVDWLTDKLTARDF-TVSAM 298

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ +A R +I+++FR  +SR                       +++ TD    LLA G
Sbjct: 299 HGDMEQAQRDVIMKEFRSGSSR-----------------------VLIATD----LLARG 358

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I
Sbjct: 359 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQI 398

Query: 203 AEMPINISEIL 212
            EMP+N+++++
Sbjct: 419 EEMPMNVADLI 398

[Close]

BLAST of Cmc08g0212871 vs. ExPASy TrEMBL
Match: A0A1S3B0P7 (eukaryotic initiation factor 4A-I isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484771 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.7e-110
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKEIYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPINISEIL 212
           VVGGEVVTLKSIEENSGLVIAEMPINISEIL
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPINISEIL 211

[Close]

BLAST of Cmc08g0212871 vs. ExPASy TrEMBL
Match: A0A5D3CLW0 (ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004870 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 207
           VVGGEVVTLKSIEENSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 206

[Close]

BLAST of Cmc08g0212871 vs. ExPASy TrEMBL
Match: A0A0A0KFR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490840 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.0e-108
Identity = 205/211 (97.16%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSS
Sbjct: 1   MAIDPFEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQTTSRWSQKFSSLSEEKCE E
Sbjct: 61  RDELDSVCSAVSNLHYISLASLYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPINISEIL 212
           VVGGEVVTLKSIEE+SGLVIAEMPINISEIL
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPINISEIL 211

[Close]

BLAST of Cmc08g0212871 vs. ExPASy TrEMBL
Match: A0A1S3B1C4 (ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484771 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.1e-108
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE
Sbjct: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINM
Sbjct: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKEIYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 207
           VVGGEVVTLKSIEENSGLVIAEMPIN
Sbjct: 181 VVGGEVVTLKSIEENSGLVIAEMPIN 206

[Close]

BLAST of Cmc08g0212871 vs. ExPASy TrEMBL
Match: A0A6J1HF44 (eukaryotic initiation factor 4A-I isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463598 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103
Identity = 198/211 (93.84%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60
           MAID IEAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS
Sbjct: 1   MAIDGIEAFSPPSHPSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSS 60

Query: 61  RDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGE 120
           RDELD+VCSAVSNLQYISLASLYSDLAEADRALILE FRQTTSRWSQK +SLS++KCE E
Sbjct: 61  RDELDAVCSAVSNLQYISLASLYSDLAEADRALILETFRQTTSRWSQKLNSLSDDKCEVE 120

Query: 121 KVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINM 180
           + GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKETYMRRMTTCSASDGILINM
Sbjct: 121 EDGEKSHMIVVTDACLPLLASGESPLSAHVLINYELPTKKETYMRRMTTCSASDGILINM 180

Query: 181 VVGGEVVTLKSIEENSGLVIAEMPINISEIL 212
           VVGGEVVTLKSIEE+SGLVIAEMPINISEIL
Sbjct: 181 VVGGEVVTLKSIEESSGLVIAEMPINISEIL 211

[Close]

BLAST of Cmc08g0212871 vs. TAIR 10
Match: AT4G37020.1 (BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 275.8 bits (704), Expect = 2.9e-74
Identity = 143/212 (67.45%), Postives = 175/212 (82.55%), Query Frame = 0


Query: 3   IDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRD 62
           +D +EA S P  S S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRD
Sbjct: 1   MDSMEAPSLPFQSPSRSSQQLHFYLAVDRPQFKMETVVELLGVLGRRPWLPIVVCCSSRD 60

Query: 63  ELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV 122
           ELD+VCS++S L YISLA+LYSDLA+ +RA+++EKFRQ T  W+Q+ +S+ EE  E  + 
Sbjct: 61  ELDAVCSSLSTLPYISLAALYSDLADRERAMVIEKFRQATINWNQQLNSVVEEGLEESEN 120

Query: 123 GEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILIN 182
           G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+IN
Sbjct: 121 GKEEKTSHLVVVTDVCLPLLSSGESSLSARVLINYELPTKKETYTRRITTCLASGGIVIN 180

Query: 183 MVVGGEVVTLKSIEENSGLVIAEMPINISEIL 212
           MVVGGEV TLKS+EE+SG++IAEMPINISEIL
Sbjct: 181 MVVGGEVTTLKSLEESSGILIAEMPINISEIL 212

[Close]

BLAST of Cmc08g0212871 vs. TAIR 10
Match: AT4G37020.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1). )

HSP 1 Score: 269.2 bits (687), Expect = 2.7e-72
Identity = 138/208 (66.35%), Postives = 171/208 (82.21%), Query Frame = 0


Query: 3   IDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRD 62
           +D +EA S P  S S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRD
Sbjct: 1   MDSMEAPSLPFQSPSRSSQQLHFYLAVDRPQFKMETVVELLGVLGRRPWLPIVVCCSSRD 60

Query: 63  ELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV 122
           ELD+VCS++S L YISLA+LYSDLA+ +RA+++EKFRQ T  W+Q+ +S+ EE  E  + 
Sbjct: 61  ELDAVCSSLSTLPYISLAALYSDLADRERAMVIEKFRQATINWNQQLNSVVEEGLEESEN 120

Query: 123 GEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILIN 182
           G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+IN
Sbjct: 121 GKEEKTSHLVVVTDVCLPLLSSGESSLSARVLINYELPTKKETYTRRITTCLASGGIVIN 180

Query: 183 MVVGGEVVTLKSIEENSGLVIAEMPINI 208
           MVVGGEV TLKS+EE+SG++IAEMPIN+
Sbjct: 181 MVVGGEVTTLKSLEESSGILIAEMPINV 208

[Close]

BLAST of Cmc08g0212871 vs. TAIR 10
Match: AT3G19760.1 (eukaryotic initiation factor 4A-III )

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 42/191 (21.99%), Postives = 92/191 (48.17%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           + F+VAV++ ++K +TL  L D          ++ C+++ ++D +   + +  + +++S+
Sbjct: 249 KQFFVAVEKEEWKFDTLCDLYDTL---TITQAVIFCNTKRKVDYLSEKMRSHNF-TVSSM 308

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ + +R  I+ +FR   SR                       +++ TD    + A G
Sbjct: 309 HGDMPQKERDAIMNEFRSGDSR-----------------------VLITTD----VWARG 368

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++INY++P  +E Y+ R+         G+ IN V   ++  L+ IE+     I
Sbjct: 369 IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQI 408

Query: 203 AEMPINISEIL 212
            EMP+N+++++
Sbjct: 429 DEMPMNVADLI 408

[Close]

BLAST of Cmc08g0212871 vs. TAIR 10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 56.6 bits (135), Expect = 2.8e-08
Identity = 42/191 (21.99%), Postives = 92/191 (48.17%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           + FYV VD+ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ 
Sbjct: 255 KQFYVNVDKEEWKLETLCDLYETLAITQS---VIFVNTRRKVDWLTDKMRSRDH-TVSAT 314

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ +  R +I+ +FR  +SR                       +++ TD    LLA G
Sbjct: 315 HGDMDQNTRDIIMREFRSGSSR-----------------------VLITTD----LLARG 374

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++IN+++PT+ E Y+ R+         G+ IN +   +   +  I+    +V+
Sbjct: 375 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVV 414

Query: 203 AEMPINISEIL 212
            E+P N++++L
Sbjct: 435 EELPSNVADLL 414

[Close]

BLAST of Cmc08g0212871 vs. TAIR 10
Match: AT3G13920.1 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 43/191 (22.51%), Postives = 93/191 (48.69%), Query Frame = 0


Query: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASL 82
           + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ 
Sbjct: 253 KQFYVNVEKEEWKLETLCDLYETLAITQS---VIFVNTRRKVDWLTDKMRSRDH-TVSAT 312

Query: 83  YSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASG 142
           + D+ +  R +I+ +FR  +SR                       +++ TD    LLA G
Sbjct: 313 HGDMDQNTRDIIMREFRSGSSR-----------------------VLITTD----LLARG 372

Query: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVI 202
                  ++IN+++PT+ E Y+ R+         G+ IN V   +   L  I++   +V+
Sbjct: 373 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVV 412

Query: 203 AEMPINISEIL 212
            E+P N++++L
Sbjct: 433 EELPSNVADLL 412

The following BLAST results are available for this feature:

BLAST of Cmc08g0212871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440274.1	1.2e-109	99.53	PREDICTED: eukaryotic initiation factor 4A-I isoform X1 [Cucumis melo]	[more]
TYK12893.1	3.8e-108	100.00	ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_004141918.1	1.4e-107	97.16	eukaryotic initiation factor 4A-I isoform X3 [Cucumis sativus] >KGN48520.1 hypot...	[more]
XP_008440275.1	1.9e-107	99.51	PREDICTED: ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo]	[more]
XP_031742372.1	1.3e-105	96.62	ATP-dependent RNA helicase eIF4A isoform X1 [Cucumis sativus]	[more]

BLAST of Cmc08g0212871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02494	6.2e-13	27.23	Eukaryotic initiation factor 4A OS=Cryptosporidium parvum OX=5807 GN=EIF4-A PE=2...	[more]
Q4P331	4.5e-11	24.08	ATP-dependent RNA helicase eIF4A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=...	[more]
A4QVP2	2.2e-10	23.56	ATP-dependent RNA helicase eIF4A OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-...	[more]
Q7RV88	2.2e-10	23.56	ATP-dependent RNA helicase eIF4A OS=Neurospora crassa (strain ATCC 24698 / 74-OR...	[more]
A1D7N3	3.8e-10	23.04	ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM...	[more]

BLAST of Cmc08g0212871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0P7	5.7e-110	99.53	eukaryotic initiation factor 4A-I isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5D3CLW0	1.8e-108	100.00	ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KFR9	7.0e-108	97.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490840 PE=4 SV=1	[more]
A0A1S3B1C4	9.1e-108	99.51	ATP-dependent RNA helicase FAL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034847...	[more]
A0A6J1HF44	3.9e-103	93.84	eukaryotic initiation factor 4A-I isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Cmc08g0212871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37020.1	2.9e-74	67.45	BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III ...	[more]
AT4G37020.2	2.7e-72	66.35	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G19760.1	1.9e-09	21.99	eukaryotic initiation factor 4A-III	[more]
AT1G72730.1	2.8e-08	21.99	DEA(D/H)-box RNA helicase family protein	[more]
AT3G13920.1	3.6e-08	22.51	eukaryotic translation initiation factor 4A1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 16..211 e-value: 2.6E-12 score: 48.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 22..208
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 4..208
None	No IPR available	PANTHER	PTHR24031:SF359	INITIATION FACTOR 4A-LIKE PROTEIN	coord: 4..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0212871.1	Cmc08g0212871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003743	translation initiation factor activity