Cmc08g0212531 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0212531
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	B3 domain-containing transcription factor VRN1-like
Location	CMiso1.1chr08: 3345253 .. 3346545 (-)
RNA-Seq Expression	Cmc08g0212531
Synteny	Cmc08g0212531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCAAAGAAGTTTATTACTGACTATGGAAAGTTCCTTTCGAATCCCATTTGCCTTAAGCCTCCCGACGGCATGGAATGGAAGGTCGAATCCACGACAACGCCAAACGGCACCGTTTGGCTTCGAAATGGGTGGCAAGAATTTTCAAATCATTACGGTTTGAAATCTGGCTCACTTTTGGTTTTTAGACTTGATGGAAACTCTACATTTCATACTCTTATTTTCAACCAAAATTGTTCTGAAATTCAATATTCTTCCAACCATGTTGGAGATGTAGAATCCAACCAAGGTACACGTACGTGTTCTTTTTTTCAGATCAACAACTTCGATATTTTCAAAAAAGAATCTCTTCATGAAACATGTTTTTTTTTTTCCTTTTCTATTCACCATTATATATGGCCAATGTTTACTGTTACGTGATTTTTTTAGAAGAATACAGTACTAGACCCCAAACAGAGGAGACTGAAGCAAAACCTGAAAAAATTGGTTTTAAAATTGCTGTGAAGAAATCGTATATTGAAGGTCGCTATAACATGGTATGTACGTTTAATACAAAGGGTTTGTTTCGATTGAGTTTTTTGTGTTTAAAGAAGAGTTTGTTTTTCTTACTTGTAGCTTATTCCTAAATGTTTTGCGAGGAGACATTTGAATGAAGAGTTTGGAAAGATAGAAATTGAGAATTCAGATGGTATGAGTTGGCCAATGATTTACAAATGGAGCCAAAGCCGTAAAGTGGAGTTTGCTTATATTTCAAGTGGTTGGAAAGCTTTTGCAAAAGAAAATCACTTAAAAGAAGGACATATTTTGTTCTTTCAATTGATAAAAAAGGGCCATTTTTTGTTCACTCTAGAAGGGATTATTCCTCCATCTTCACCCATTTTAGCAAATAACGAAAATGTGGAATCTACAACTCCCAGTTACGATCACTTCTTCAAAGTCAATATCCACATGAAAAGCTACAAGAACTCTGTTTTGGTAAGGAAAAAAAAATCCCTTTTTAGTTAAATAATATAGATATATATTCATTTATTACAAATGTGATTCATCTGGCAGAACATTCCTCTGACATTTGCTGACAACCATCTTTCTTCGAAAATGCATACTGCAAAACTTATGGTGGGGAAGAAGCAATGGAAAGTGAAGTTGAAACACTACGAAAGATGCATCAGATTTTCAGGTGGTTGGGCAGAATTTTTTAGGCAAAATAATTTAAAATCTGGAGATTCTTGCTTGTTTAAGTTGCTCACCAAGAATGAATCTTATTGTATTTTTAAAGTTAATATTTCATGA

mRNA sequence

ATGATTCCAAAGAAGTTTATTACTGACTATGGAAAGTTCCTTTCGAATCCCATTTGCCTTAAGCCTCCCGACGGCATGGAATGGAAGGTCGAATCCACGACAACGCCAAACGGCACCGTTTGGCTTCGAAATGGGTGGCAAGAATTTTCAAATCATTACGGTTTGAAATCTGGCTCACTTTTGGTTTTTAGACTTGATGGAAACTCTACATTTCATACTCTTATTTTCAACCAAAATTGTTCTGAAATTCAATATTCTTCCAACCATGTTGGAGATGTAGAATCCAACCAAGAAGAATACAGTACTAGACCCCAAACAGAGGAGACTGAAGCAAAACCTGAAAAAATTGGTTTTAAAATTGCTGTGAAGAAATCGTATATTGAAGGTCGCTATAACATGCTTATTCCTAAATGTTTTGCGAGGAGACATTTGAATGAAGAGTTTGGAAAGATAGAAATTGAGAATTCAGATGGTATGAGTTGGCCAATGATTTACAAATGGAGCCAAAGCCGTAAAGTGGAGTTTGCTTATATTTCAAGTGGTTGGAAAGCTTTTGCAAAAGAAAATCACTTAAAAGAAGGACATATTTTGTTCTTTCAATTGATAAAAAAGGGCCATTTTTTGTTCACTCTAGAAGGGATTATTCCTCCATCTTCACCCATTTTAGCAAATAACGAAAATGTGGAATCTACAACTCCCAGTTACGATCACTTCTTCAAAGTCAATATCCACATGAAAAGCTACAAGAACTCTGTTTTGAACATTCCTCTGACATTTGCTGACAACCATCTTTCTTCGAAAATGCATACTGCAAAACTTATGGTGGGGAAGAAGCAATGGAAAGTGAAGTTGAAACACTACGAAAGATGCATCAGATTTTCAGGTGGTTGGGCAGAATTTTTTAGGCAAAATAATTTAAAATCTGGAGATTCTTGCTTGTTTAAGTTGCTCACCAAGAATGAATCTTATTGTATTTTTAAAGTTAATATTTCATGA

Coding sequence (CDS)

ATGATTCCAAAGAAGTTTATTACTGACTATGGAAAGTTCCTTTCGAATCCCATTTGCCTTAAGCCTCCCGACGGCATGGAATGGAAGGTCGAATCCACGACAACGCCAAACGGCACCGTTTGGCTTCGAAATGGGTGGCAAGAATTTTCAAATCATTACGGTTTGAAATCTGGCTCACTTTTGGTTTTTAGACTTGATGGAAACTCTACATTTCATACTCTTATTTTCAACCAAAATTGTTCTGAAATTCAATATTCTTCCAACCATGTTGGAGATGTAGAATCCAACCAAGAAGAATACAGTACTAGACCCCAAACAGAGGAGACTGAAGCAAAACCTGAAAAAATTGGTTTTAAAATTGCTGTGAAGAAATCGTATATTGAAGGTCGCTATAACATGCTTATTCCTAAATGTTTTGCGAGGAGACATTTGAATGAAGAGTTTGGAAAGATAGAAATTGAGAATTCAGATGGTATGAGTTGGCCAATGATTTACAAATGGAGCCAAAGCCGTAAAGTGGAGTTTGCTTATATTTCAAGTGGTTGGAAAGCTTTTGCAAAAGAAAATCACTTAAAAGAAGGACATATTTTGTTCTTTCAATTGATAAAAAAGGGCCATTTTTTGTTCACTCTAGAAGGGATTATTCCTCCATCTTCACCCATTTTAGCAAATAACGAAAATGTGGAATCTACAACTCCCAGTTACGATCACTTCTTCAAAGTCAATATCCACATGAAAAGCTACAAGAACTCTGTTTTGAACATTCCTCTGACATTTGCTGACAACCATCTTTCTTCGAAAATGCATACTGCAAAACTTATGGTGGGGAAGAAGCAATGGAAAGTGAAGTTGAAACACTACGAAAGATGCATCAGATTTTCAGGTGGTTGGGCAGAATTTTTTAGGCAAAATAATTTAAAATCTGGAGATTCTTGCTTGTTTAAGTTGCTCACCAAGAATGAATCTTATTGTATTTTTAAAGTTAATATTTCATGA

Protein sequence

MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSLLVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKIAVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFKVNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEFFRQNNLKSGDSCLFKLLTKNESYCIFKVNIS

Homology

[Close]

BLAST of Cmc08g0212531 vs. NCBI nr
Match: XP_031743781.1 (B3 domain-containing transcription factor VRN1-like [Cucumis sativus])

HSP 1 Score: 638.6 bits (1646), Expect = 2.9e-179
Identity = 304/330 (92.12%), Postives = 315/330 (95.45%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIPKKFITDYGKFLSNPICLK PDG+EWKVESTTTPNGTVWL+NGWQEFSNHYGLKSGSL
Sbjct: 31  MIPKKFITDYGKFLSNPICLKTPDGLEWKVESTTTPNGTVWLQNGWQEFSNHYGLKSGSL 90

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKI 120
           LVFRLDGNSTFHTLIFNQNCSEIQYSSN++G VESNQEEY+TRPQTEETEAKPEKIGFKI
Sbjct: 91  LVFRLDGNSTFHTLIFNQNCSEIQYSSNYIGHVESNQEEYTTRPQTEETEAKPEKIGFKI 150

Query: 121 AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 180
            VKKSYIEGRYNML+PK FARRHLNEEFGKIEIENSDGM WPMIYKWSQSRKV FAYISS
Sbjct: 151 VVKKSYIEGRYNMLLPKYFARRHLNEEFGKIEIENSDGMGWPMIYKWSQSRKVGFAYISS 210

Query: 181 GWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFK 240
           GWKAFAKENHLKEGHIL FQLIKKGHFLFTLEGII P SPILANN+NVESTTP+YDHFFK
Sbjct: 211 GWKAFAKENHLKEGHILSFQLIKKGHFLFTLEGIISPPSPILANNKNVESTTPNYDHFFK 270

Query: 241 VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF 300
           VNIHMKSYKN VLNIPLTFA NHLSS MHTAKLMVGKKQW VKLKHYERCIRFSGGWAEF
Sbjct: 271 VNIHMKSYKNCVLNIPLTFAHNHLSSTMHTAKLMVGKKQWNVKLKHYERCIRFSGGWAEF 330

Query: 301 FRQNNLKSGDSCLFKLLTKNESYCIFKVNI 331
           F+QN+LK GDSCLFKLLTKNESYC+FKV I
Sbjct: 331 FKQNDLKPGDSCLFKLLTKNESYCVFKVKI 360

[Close]

BLAST of Cmc08g0212531 vs. NCBI nr
Match: KAE8647490.1 (hypothetical protein Csa_003352 [Cucumis sativus])

HSP 1 Score: 638.6 bits (1646), Expect = 2.9e-179
Identity = 304/330 (92.12%), Postives = 315/330 (95.45%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIPKKFITDYGKFLSNPICLK PDG+EWKVESTTTPNGTVWL+NGWQEFSNHYGLKSGSL
Sbjct: 395 MIPKKFITDYGKFLSNPICLKTPDGLEWKVESTTTPNGTVWLQNGWQEFSNHYGLKSGSL 454

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKI 120
           LVFRLDGNSTFHTLIFNQNCSEIQYSSN++G VESNQEEY+TRPQTEETEAKPEKIGFKI
Sbjct: 455 LVFRLDGNSTFHTLIFNQNCSEIQYSSNYIGHVESNQEEYTTRPQTEETEAKPEKIGFKI 514

Query: 121 AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 180
            VKKSYIEGRYNML+PK FARRHLNEEFGKIEIENSDGM WPMIYKWSQSRKV FAYISS
Sbjct: 515 VVKKSYIEGRYNMLLPKYFARRHLNEEFGKIEIENSDGMGWPMIYKWSQSRKVGFAYISS 574

Query: 181 GWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFK 240
           GWKAFAKENHLKEGHIL FQLIKKGHFLFTLEGII P SPILANN+NVESTTP+YDHFFK
Sbjct: 575 GWKAFAKENHLKEGHILSFQLIKKGHFLFTLEGIISPPSPILANNKNVESTTPNYDHFFK 634

Query: 241 VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF 300
           VNIHMKSYKN VLNIPLTFA NHLSS MHTAKLMVGKKQW VKLKHYERCIRFSGGWAEF
Sbjct: 635 VNIHMKSYKNCVLNIPLTFAHNHLSSTMHTAKLMVGKKQWNVKLKHYERCIRFSGGWAEF 694

Query: 301 FRQNNLKSGDSCLFKLLTKNESYCIFKVNI 331
           F+QN+LK GDSCLFKLLTKNESYC+FKV I
Sbjct: 695 FKQNDLKPGDSCLFKLLTKNESYCVFKVKI 724

[Close]

BLAST of Cmc08g0212531 vs. NCBI nr
Match: TYK12921.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 602.8 bits (1553), Expect = 1.8e-168
Identity = 296/331 (89.43%), Postives = 299/331 (90.33%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIPKKFITDYGKFLSNPICLKPPDG+EWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL
Sbjct: 394 MIPKKFITDYGKFLSNPICLKPPDGVEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 453

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKI 120
           LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVE NQEEYST+PQTEETEAKPEKIGFKI
Sbjct: 454 LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVEPNQEEYSTKPQTEETEAKPEKIGFKI 513

Query: 121 AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 180
           AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS
Sbjct: 514 AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 573

Query: 181 GWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFK 240
                                          EGIIPPSSPILANNENVESTTPSYDHFFK
Sbjct: 574 -------------------------------EGIIPPSSPILANNENVESTTPSYDHFFK 633

Query: 241 VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF 300
           VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF
Sbjct: 634 VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF 693

Query: 301 FRQNNLKSGDSCLFKLLTKNESYCIFKVNIS 332
           FRQNNLKSGDSCLFKLLTKNESYCIFKV+IS
Sbjct: 694 FRQNNLKSGDSCLFKLLTKNESYCIFKVDIS 693

[Close]

BLAST of Cmc08g0212531 vs. NCBI nr
Match: XP_022132590.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Momordica charantia] >XP_022132592.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 9.2e-85
Identity = 170/397 (42.82%), Postives = 231/397 (58.19%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIP+KF+ +YGKFLS+ + LK PDG EWKV    T NG VWL+NGW  F+ HY LK GS+
Sbjct: 1   MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 60

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYS---SNHVGDVESNQEEYS---------------- 120
           LV RLD NSTF TLIF  + SEI+YS   ++  GD +   ++ S                
Sbjct: 61  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDDSDESFEIFHQHSKKREK 120

Query: 121 ------------------------------------------------TRPQTEETEAKP 180
                                                            +P +   +   
Sbjct: 121 PSLPSSQSRKKMRSEGSFSPKMVPQEGRHISREKPSCKRMAQNGVSNRRQPLSSPAKKAE 180

Query: 181 EKIGFKIAVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKV 240
           +K GFK+ + KS + GR+N++IPK FA ++L EEFG I ++NS+G +WP++YKW++SR  
Sbjct: 181 KKPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTWPLLYKWTRSRAY 240

Query: 241 EFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTP 300
            F+YISSGWK FA+EN LK G + FFQLI+ G FLFT E   P +SP L+  +  E+ T 
Sbjct: 241 AFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPSLSPKKEAETAT- 300

Query: 301 SYDHFFKVNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRF 331
             + FFKV+IH  SY+++VLNIP+ F   H+    HT  L +G K+WKV +K+Y+RC RF
Sbjct: 301 --NPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSMKNYDRCFRF 360

[Close]

BLAST of Cmc08g0212531 vs. NCBI nr
Match: XP_022132589.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 9.2e-85
Identity = 170/397 (42.82%), Postives = 231/397 (58.19%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIP+KF+ +YGKFLS+ + LK PDG EWKV    T NG VWL+NGW  F+ HY LK GS+
Sbjct: 23  MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 82

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYS---SNHVGDVESNQEEYS---------------- 120
           LV RLD NSTF TLIF  + SEI+YS   ++  GD +   ++ S                
Sbjct: 83  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDDSDESFEIFHQHSKKREK 142

Query: 121 ------------------------------------------------TRPQTEETEAKP 180
                                                            +P +   +   
Sbjct: 143 PSLPSSQSRKKMRSEGSFSPKMVPQEGRHISREKPSCKRMAQNGVSNRRQPLSSPAKKAE 202

Query: 181 EKIGFKIAVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKV 240
           +K GFK+ + KS + GR+N++IPK FA ++L EEFG I ++NS+G +WP++YKW++SR  
Sbjct: 203 KKPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTWPLLYKWTRSRAY 262

Query: 241 EFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTP 300
            F+YISSGWK FA+EN LK G + FFQLI+ G FLFT E   P +SP L+  +  E+ T 
Sbjct: 263 AFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPSLSPKKEAETAT- 322

Query: 301 SYDHFFKVNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRF 331
             + FFKV+IH  SY+++VLNIP+ F   H+    HT  L +G K+WKV +K+Y+RC RF
Sbjct: 323 --NPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSMKNYDRCFRF 382

[Close]

BLAST of Cmc08g0212531 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-22
Identity = 94/333 (28.23%), Postives = 151/333 (45.35%), Query Frame = 0


Query: 2   IPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSLL 61
           +P KF++ +   LS  + L  PDG  W+V      N  +W ++GWQEF + Y ++ G LL
Sbjct: 22  VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQDGWQEFVDRYSIRIGYLL 81

Query: 62  VFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKIA 121
           +FR +GNS F   IFN + SEI Y S   G ++S    +      E+ E +  ++ F  +
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHS--TGLMDSAHNHFKRARLFEDLEDEDAEVIFPSS 141

Query: 122 VKKSYIEGRYNMLIPKCFARRHLNEEF-GKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 181
           V  S +     +   K +A   +   F G ++ E  +    P I K  + RK + A    
Sbjct: 142 VYPSPLP-ESTVPANKGYASSAIQTLFTGPVKAE--EPTPTPKIPK-KRGRKKKNA-DPE 201

Query: 182 GWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFK 241
              + A  +   E    F++         T E         +   +  E T P    FF+
Sbjct: 202 EINSSAPRDDDPENRSKFYESASARKRTVTAE----ERERAINAAKTFEPTNP----FFR 261

Query: 242 VNIHMK-SYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAE 301
           V +     Y+  ++ +P  FA+ +LS      K+ + +KQW V+  +     +FS GW E
Sbjct: 262 VVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKAGRAKFSQGWYE 321

Query: 302 FFRQNNLKSGDSCLFKLLTKNE---SYCIFKVN 330
           F  +NNL  GD C+F+LL   +       F+VN
Sbjct: 322 FTLENNLGEGDVCVFELLRTRDFVLKVTAFRVN 338

[Close]

BLAST of Cmc08g0212531 vs. ExPASy Swiss-Prot
Match: Q84WP3 (B3 domain-containing protein REM17 OS=Arabidopsis thaliana OX=3702 GN=REM17 PE=2 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 79/298 (26.51%), Postives = 142/298 (47.65%), Query Frame = 0


Query: 42  LRNGWQEFSNHYGLKSGSLLVFRLDGNSTFHTLIFNQNCSEIQY--SSNHVGDVESNQEE 101
           L +GW++F+  + L++G ++VFRL+G   FH      +C EIQY  SS+++ D + N + 
Sbjct: 68  LTDGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQYHTSSHNINDDDRNDQI 127

Query: 102 YSTRPQTEETEAKPEKIGFKIAVKKSYIEGRY------------NMLIPKCFARRH-LNE 161
                 +   +  P K      V+ S    R+             + IP  FAR + LN+
Sbjct: 128 NIASRNSSRVKKNPRK-----KVESSLDHSRFVAKVSAWCLSNDRLYIPLSFARLNGLNK 187

Query: 162 -EFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKG 221
               KI ++N +G SW ++ +  +S    F  + SGW+ F  EN +++G    F+L++K 
Sbjct: 188 INSKKIYLQNEEGRSWKLVLRHDKSGMQTF--VQSGWRRFCSENGIRQGQYT-FKLVRKS 247

Query: 222 HFLFTLEGIIPPSSPIL---ANNENVESTTPSYDH-FFKVNIHMKSYKNSVLNIPLTFAD 281
                     PP   +    A  +       S DH  F+ ++   S +N +L +P +F +
Sbjct: 248 ---------APPVIRLCRAKAKPKQRSVAEYSSDHSCFEGSVTPSSLRNDLLYLPRSFVN 307

Query: 282 NHLSSKMHTAKLMVGKK--QWKVKLKHYERCIRFSGGWAEFFRQNNLKSGDSCLFKLL 318
           ++   K  +  ++  ++  +W + LK ++       GW  F + N +K+GDS  FKL+
Sbjct: 308 SNRLDKRCSEIVLKNEQGVKWPLVLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLV 348

[Close]

BLAST of Cmc08g0212531 vs. ExPASy Swiss-Prot
Match: Q8GYM4 (B3 domain-containing protein REM14 OS=Arabidopsis thaliana OX=3702 GN=REM14 PE=2 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 7.7e-18
Identity = 84/284 (29.58%), Postives = 123/284 (43.31%), Query Frame = 0


Query: 42  LRNGWQEFSNHYGLKSGSLLVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYS 101
           L +GW+EF+  + L+ G ++VFR + + +FH  +   +C EIQY S    D E N E+  
Sbjct: 58  LTDGWKEFALSHDLRIGDIVVFRQERDMSFHVTMLGPSCCEIQYGS--CSDEERNLEK-K 117

Query: 102 TRPQTEETEAKPEKIGFKIAVKKSYIEGRYN-MLIPKCFARRHLNEEFGKIEIENSDGMS 161
             P  E   +  +   F   V  S +  RY+ ML P  F R +     GKI + N  G S
Sbjct: 118 KNPNGEAKSSSLDPSCFSANVAPSSL--RYDLMLFPMGFVRENGVVGSGKIVLMNEKGRS 177

Query: 162 WPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSP 221
           W   +   Q       Y+  GW +F   N L+ G I  F+LIK+G  L            
Sbjct: 178 WN--FNLRQKPSCGTVYVRGGWVSFCDANGLQAGDIYTFKLIKRGGTLVL---------R 237

Query: 222 ILANNENVESTTPSYDHFFKVNIHMKSYKNSVLNIPLTF-ADNHLSSKMHTAKLMVGK-K 281
           +L       S  PS    F  N+   + +   L +P  F  +N +  +     LM  K K
Sbjct: 238 LLPKGAESCSLDPS---CFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGK 297

Query: 282 QWKVKLKHYERC--IRFSGGWAEFFRQNNLKSGDSCLFKLLTKN 321
            W + LK  + C       GW  F   N L++G    FKL+ K+
Sbjct: 298 SWTLDLKLKKSCGTSLIRRGWRSFCSANGLRAGSIITFKLIKKS 322

[Close]

BLAST of Cmc08g0212531 vs. ExPASy Swiss-Prot
Match: P0DH85 (B3 domain-containing protein REM10 OS=Arabidopsis thaliana OX=3702 GN=REM10 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.1e-15
Identity = 83/316 (26.27%), Postives = 131/316 (41.46%), Query Frame = 0


Query: 26  MEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSLLVFRLDGNSTFHTLIFNQNCSEIQY 85
           M WKV+          L NGW++F+  + L+ G ++VFR +G   FH      +C EIQY
Sbjct: 55  MTWKVKIDGRR-----LSNGWEDFTIAHDLRVGDIVVFRQEGELVFHVTALGPSCCEIQY 114

Query: 86  SSNHVGDVESNQ----EEYSTRPQT--EETEAKPEK---IGFKIAVKKSYIEGRYNMLIP 145
             + + + +  +    E  S++ ++   E E+ P+      F   V  S ++ R  + IP
Sbjct: 115 GEDTLEEDKIEKLCGTENVSSKKKSLKREAESAPDNSLDSCFVATVTGSNLK-RDTLYIP 174

Query: 146 KCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHI 205
           K FA  +      +I + N +G SW +  +        F Y+  GW++F   N  K G +
Sbjct: 175 KEFALSNGLMNKYQIVLMNEEGESWKIDLRREAYNYGRF-YMRRGWRSFCIANGKKPGDV 234

Query: 206 LFFQLIKKGH------FLFTLEGIIPPSSPILANNENVESTTPSYD-HFFKVNIHMKSYK 265
             F+L+K         F  T+E +    S         E+   S D   F   +   +  
Sbjct: 235 FAFKLVKNEETPMIQLFPMTIEDLDKLQSLPRHKIRKTEAAPSSPDLSSFVATVTASNLS 294

Query: 266 NSVLNIPLTF-ADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRF--SGGWAEFFRQNNL 323
              L +P TF   N L  K     +    + W + +KH     RF    GW  F   N  
Sbjct: 295 RDRLYLPKTFIMSNGLLKKFQMCLMNEEGESWTIDVKHEAHTGRFLTIRGWRRFCVANGK 354

[Close]

BLAST of Cmc08g0212531 vs. ExPASy Swiss-Prot
Match: Q8H2D1 (B3 domain-containing protein REM8 OS=Arabidopsis thaliana OX=3702 GN=REM8 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-13
Identity = 79/333 (23.72%), Postives = 143/333 (42.94%), Query Frame = 0


Query: 2   IPKKFITDY--GKFLSNPICLKPPDGME-WKVESTTTPNGTVWLRNGWQEFSNHYGLKSG 61
           IP KF +++  GK     + L+       W+V+          L  GW+EF   + L+  
Sbjct: 28  IPVKFFSEHIEGKHEGETVKLRADASKRTWEVKMDGNR-----LTEGWKEFVEAHDLRIR 87

Query: 62  SLLVFRLDGNSTFHTLIFNQNCSEIQY-------SSNHVGDVESNQEEYSTRPQTEETEA 121
             +VFR +G+  FH      +C EIQY            G+VE ++ E     Q E  ++
Sbjct: 88  DFVVFRHEGDMVFHVTALGPSCCEIQYPQSISHEEGEESGEVEISEREVEENLQKEYDQS 147

Query: 122 KPEKIGFKIAVKKSYIEGRYNMLIPKCFARRH-LNEEFGKIEIENSDGMSWPMIYKWSQS 181
             +   F  +V  S I     + +P+ FA+R+ L++   +I + N +G SW    +   S
Sbjct: 148 SADLNCFSQSVTHSNISNDL-VTLPRDFAKRNGLDKGMHEIVLMNEEGKSWESEVRSRMS 207

Query: 182 RKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVES 241
            +V   +I  GWK+   EN LK G    F+L++               +P+      +  
Sbjct: 208 GQV---FIVGGWKSLCSENKLKGGDSCTFKLLQNA------------KTPVFQLCSRIGE 267

Query: 242 TTPSYDHFFKVNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKK---QWKVKLKHY 301
           +      F K+   + S +    ++P++F     +  +H  ++++  K   +W +KL+  
Sbjct: 268 S-----RFVKLTPTLNSLEIGKQHLPVSFTKG--NGLIHPGEIILVDKDRVEWSMKLQVD 327

Query: 302 ER-CIRFSGG--WAEFFRQNNLKSGDSCLFKLL 318
            R  +   GG  W  F   N + +G+S   +L+
Sbjct: 328 NRGGMHIFGGNDWKSFCAANEVGAGESLTLELI 332

[Close]

BLAST of Cmc08g0212531 vs. ExPASy TrEMBL
Match: A0A5D3CM75 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005160 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 8.5e-169
Identity = 296/331 (89.43%), Postives = 299/331 (90.33%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIPKKFITDYGKFLSNPICLKPPDG+EWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL
Sbjct: 394 MIPKKFITDYGKFLSNPICLKPPDGVEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 453

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKI 120
           LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVE NQEEYST+PQTEETEAKPEKIGFKI
Sbjct: 454 LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVEPNQEEYSTKPQTEETEAKPEKIGFKI 513

Query: 121 AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 180
           AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS
Sbjct: 514 AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 573

Query: 181 GWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFK 240
                                          EGIIPPSSPILANNENVESTTPSYDHFFK
Sbjct: 574 -------------------------------EGIIPPSSPILANNENVESTTPSYDHFFK 633

Query: 241 VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF 300
           VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF
Sbjct: 634 VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF 693

Query: 301 FRQNNLKSGDSCLFKLLTKNESYCIFKVNIS 332
           FRQNNLKSGDSCLFKLLTKNESYCIFKV+IS
Sbjct: 694 FRQNNLKSGDSCLFKLLTKNESYCIFKVDIS 693

[Close]

BLAST of Cmc08g0212531 vs. ExPASy TrEMBL
Match: A0A0A0KFK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489960 PE=4 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 4.8e-156
Identity = 274/330 (83.03%), Postives = 285/330 (86.36%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIPKKFITDYGKFLSNPICLK PDG+EWKVESTTTPNGTVWL+NGWQEFSNHYGLKSGSL
Sbjct: 1   MIPKKFITDYGKFLSNPICLKTPDGLEWKVESTTTPNGTVWLQNGWQEFSNHYGLKSGSL 60

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKI 120
           LVFRLDGNSTFHTLIFNQNCSEIQYSSN++G VESNQEEY+TRPQTEETEAKPEKIGFKI
Sbjct: 61  LVFRLDGNSTFHTLIFNQNCSEIQYSSNYIGHVESNQEEYTTRPQTEETEAKPEKIGFKI 120

Query: 121 AVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 180
            VKKSYIEGRYNML+PK FARRHLNEEFGKIEIENSDGM WPMIYKWSQSRKV FAYISS
Sbjct: 121 VVKKSYIEGRYNMLLPKYFARRHLNEEFGKIEIENSDGMGWPMIYKWSQSRKVGFAYISS 180

Query: 181 GWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFK 240
                                          EGII P SPILANN+NVESTTP+YDHFFK
Sbjct: 181 -------------------------------EGIISPPSPILANNKNVESTTPNYDHFFK 240

Query: 241 VNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAEF 300
           VNIHMKSYKN VLNIPLTFA NHLSS MHTAKLMVGKKQW VKLKHYERCIRFSGGWAEF
Sbjct: 241 VNIHMKSYKNCVLNIPLTFAHNHLSSTMHTAKLMVGKKQWNVKLKHYERCIRFSGGWAEF 299

Query: 301 FRQNNLKSGDSCLFKLLTKNESYCIFKVNI 331
           F+QN+LK GDSCLFKLLTKNESYC+FKV I
Sbjct: 301 FKQNDLKPGDSCLFKLLTKNESYCVFKVKI 299

[Close]

BLAST of Cmc08g0212531 vs. ExPASy TrEMBL
Match: A0A6J1BU95 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005417 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 4.5e-85
Identity = 170/397 (42.82%), Postives = 231/397 (58.19%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIP+KF+ +YGKFLS+ + LK PDG EWKV    T NG VWL+NGW  F+ HY LK GS+
Sbjct: 1   MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 60

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYS---SNHVGDVESNQEEYS---------------- 120
           LV RLD NSTF TLIF  + SEI+YS   ++  GD +   ++ S                
Sbjct: 61  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDDSDESFEIFHQHSKKREK 120

Query: 121 ------------------------------------------------TRPQTEETEAKP 180
                                                            +P +   +   
Sbjct: 121 PSLPSSQSRKKMRSEGSFSPKMVPQEGRHISREKPSCKRMAQNGVSNRRQPLSSPAKKAE 180

Query: 181 EKIGFKIAVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKV 240
           +K GFK+ + KS + GR+N++IPK FA ++L EEFG I ++NS+G +WP++YKW++SR  
Sbjct: 181 KKPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTWPLLYKWTRSRAY 240

Query: 241 EFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTP 300
            F+YISSGWK FA+EN LK G + FFQLI+ G FLFT E   P +SP L+  +  E+ T 
Sbjct: 241 AFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPSLSPKKEAETAT- 300

Query: 301 SYDHFFKVNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRF 331
             + FFKV+IH  SY+++VLNIP+ F   H+    HT  L +G K+WKV +K+Y+RC RF
Sbjct: 301 --NPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSMKNYDRCFRF 360

[Close]

BLAST of Cmc08g0212531 vs. ExPASy TrEMBL
Match: A0A6J1BTG9 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005417 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 4.5e-85
Identity = 170/397 (42.82%), Postives = 231/397 (58.19%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIP+KF+ +YGKFLS+ + LK PDG EWKV    T NG VWL+NGW  F+ HY LK GS+
Sbjct: 23  MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 82

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYS---SNHVGDVESNQEEYS---------------- 120
           LV RLD NSTF TLIF  + SEI+YS   ++  GD +   ++ S                
Sbjct: 83  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDDSDESFEIFHQHSKKREK 142

Query: 121 ------------------------------------------------TRPQTEETEAKP 180
                                                            +P +   +   
Sbjct: 143 PSLPSSQSRKKMRSEGSFSPKMVPQEGRHISREKPSCKRMAQNGVSNRRQPLSSPAKKAE 202

Query: 181 EKIGFKIAVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKV 240
           +K GFK+ + KS + GR+N++IPK FA ++L EEFG I ++NS+G +WP++YKW++SR  
Sbjct: 203 KKPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTWPLLYKWTRSRAY 262

Query: 241 EFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTP 300
            F+YISSGWK FA+EN LK G + FFQLI+ G FLFT E   P +SP L+  +  E+ T 
Sbjct: 263 AFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPSLSPKKEAETAT- 322

Query: 301 SYDHFFKVNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRF 331
             + FFKV+IH  SY+++VLNIP+ F   H+    HT  L +G K+WKV +K+Y+RC RF
Sbjct: 323 --NPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSMKNYDRCFRF 382

[Close]

BLAST of Cmc08g0212531 vs. ExPASy TrEMBL
Match: A0A6J1BT74 (B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=3673 GN=LOC111005498 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 175/412 (42.48%), Postives = 233/412 (56.55%), Query Frame = 0


Query: 1   MIPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSL 60
           MIPKKF+ DYGKFLS+ ICLK PDGMEWKV   T  NG+VWLRNGW  F+ HY L+ GS+
Sbjct: 25  MIPKKFVRDYGKFLSSSICLKLPDGMEWKVGLKTATNGSVWLRNGWHTFAEHYCLEHGSM 84

Query: 61  LVFRLDGNSTFHTLIFNQNCSEIQYS---SNHVGDVESNQEEYS---------------- 120
           LV RLDG STFHTLIF+   SEI+YS    +  GD +   ++ S                
Sbjct: 85  LVLRLDGKSTFHTLIFDATGSEIEYSFDLKDFGGDFQEESDDDSDESLESFPQHSKKREK 144

Query: 121 ---------------------TRPQTEETE------------------------------ 180
                                  P+TE  E                              
Sbjct: 145 PSFPSSQSPKKMRNEGSFSPKMEPKTEPQEECYIFWEKPSCKKISEDGVSRRQPLTSLTK 204

Query: 181 ----------AKPEKIGFKIAVKKSYIEGRYNMLIPKCFARRHLNEEFGKIEIENSDGMS 240
                     +K EK GF+I + KS + GR+ M IPK FA+ +L E+ G+I I+  DG S
Sbjct: 205 KAEEPKRFSGSKSEKPGFRIVMGKSTVGGRFFMTIPKDFAQNYLPEKVGRIRIQTLDGGS 264

Query: 241 WPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSP 300
           W ++YKWS SR   FAYIS GWK FA+EN LK+G + FFQ+I+K  FLFT+E     +S 
Sbjct: 265 WSLLYKWSPSRG-GFAYISRGWKXFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASA 324

Query: 301 ILANNENVESTTPSYDHFFKVNIH--MKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKK 331
            L+  +   +T    + FF+V++     + +  V NIP+ FA  H+S  +H+A+L VGKK
Sbjct: 325 SLSPKKTAATTR---NPFFEVDVASIAINVRLCVQNIPMGFAKKHISPVIHSARLEVGKK 384

[Close]

BLAST of Cmc08g0212531 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 108.6 bits (270), Expect = 9.7e-24
Identity = 94/333 (28.23%), Postives = 151/333 (45.35%), Query Frame = 0


Query: 2   IPKKFITDYGKFLSNPICLKPPDGMEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSLL 61
           +P KF++ +   LS  + L  PDG  W+V      N  +W ++GWQEF + Y ++ G LL
Sbjct: 22  VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQDGWQEFVDRYSIRIGYLL 81

Query: 62  VFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYSTRPQTEETEAKPEKIGFKIA 121
           +FR +GNS F   IFN + SEI Y S   G ++S    +      E+ E +  ++ F  +
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHS--TGLMDSAHNHFKRARLFEDLEDEDAEVIFPSS 141

Query: 122 VKKSYIEGRYNMLIPKCFARRHLNEEF-GKIEIENSDGMSWPMIYKWSQSRKVEFAYISS 181
           V  S +     +   K +A   +   F G ++ E  +    P I K  + RK + A    
Sbjct: 142 VYPSPLP-ESTVPANKGYASSAIQTLFTGPVKAE--EPTPTPKIPK-KRGRKKKNA-DPE 201

Query: 182 GWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVESTTPSYDHFFK 241
              + A  +   E    F++         T E         +   +  E T P    FF+
Sbjct: 202 EINSSAPRDDDPENRSKFYESASARKRTVTAE----ERERAINAAKTFEPTNP----FFR 261

Query: 242 VNIHMK-SYKNSVLNIPLTFADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRFSGGWAE 301
           V +     Y+  ++ +P  FA+ +LS      K+ + +KQW V+  +     +FS GW E
Sbjct: 262 VVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKAGRAKFSQGWYE 321

Query: 302 FFRQNNLKSGDSCLFKLLTKNE---SYCIFKVN 330
           F  +NNL  GD C+F+LL   +       F+VN
Sbjct: 322 FTLENNLGEGDVCVFELLRTRDFVLKVTAFRVN 338

[Close]

BLAST of Cmc08g0212531 vs. TAIR 10
Match: AT1G26680.1 (transcriptional factor B3 family protein )

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-21
Identity = 79/298 (26.51%), Postives = 142/298 (47.65%), Query Frame = 0


Query: 42  LRNGWQEFSNHYGLKSGSLLVFRLDGNSTFHTLIFNQNCSEIQY--SSNHVGDVESNQEE 101
           L +GW++F+  + L++G ++VFRL+G   FH      +C EIQY  SS+++ D + N + 
Sbjct: 68  LTDGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQYHTSSHNINDDDRNDQI 127

Query: 102 YSTRPQTEETEAKPEKIGFKIAVKKSYIEGRY------------NMLIPKCFARRH-LNE 161
                 +   +  P K      V+ S    R+             + IP  FAR + LN+
Sbjct: 128 NIASRNSSRVKKNPRK-----KVESSLDHSRFVAKVSAWCLSNDRLYIPLSFARLNGLNK 187

Query: 162 -EFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKG 221
               KI ++N +G SW ++ +  +S    F  + SGW+ F  EN +++G    F+L++K 
Sbjct: 188 INSKKIYLQNEEGRSWKLVLRHDKSGMQTF--VQSGWRRFCSENGIRQGQYT-FKLVRKS 247

Query: 222 HFLFTLEGIIPPSSPIL---ANNENVESTTPSYDH-FFKVNIHMKSYKNSVLNIPLTFAD 281
                     PP   +    A  +       S DH  F+ ++   S +N +L +P +F +
Sbjct: 248 ---------APPVIRLCRAKAKPKQRSVAEYSSDHSCFEGSVTPSSLRNDLLYLPRSFVN 307

Query: 282 NHLSSKMHTAKLMVGKK--QWKVKLKHYERCIRFSGGWAEFFRQNNLKSGDSCLFKLL 318
           ++   K  +  ++  ++  +W + LK ++       GW  F + N +K+GDS  FKL+
Sbjct: 308 SNRLDKRCSEIVLKNEQGVKWPLVLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLV 348

[Close]

BLAST of Cmc08g0212531 vs. TAIR 10
Match: AT2G24645.1 (Transcriptional factor B3 family protein )

HSP 1 Score: 92.8 bits (229), Expect = 5.5e-19
Identity = 84/284 (29.58%), Postives = 123/284 (43.31%), Query Frame = 0


Query: 42  LRNGWQEFSNHYGLKSGSLLVFRLDGNSTFHTLIFNQNCSEIQYSSNHVGDVESNQEEYS 101
           L +GW+EF+  + L+ G ++VFR + + +FH  +   +C EIQY S    D E N E+  
Sbjct: 58  LTDGWKEFALSHDLRIGDIVVFRQERDMSFHVTMLGPSCCEIQYGS--CSDEERNLEK-K 117

Query: 102 TRPQTEETEAKPEKIGFKIAVKKSYIEGRYN-MLIPKCFARRHLNEEFGKIEIENSDGMS 161
             P  E   +  +   F   V  S +  RY+ ML P  F R +     GKI + N  G S
Sbjct: 118 KNPNGEAKSSSLDPSCFSANVAPSSL--RYDLMLFPMGFVRENGVVGSGKIVLMNEKGRS 177

Query: 162 WPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSP 221
           W   +   Q       Y+  GW +F   N L+ G I  F+LIK+G  L            
Sbjct: 178 WN--FNLRQKPSCGTVYVRGGWVSFCDANGLQAGDIYTFKLIKRGGTLVL---------R 237

Query: 222 ILANNENVESTTPSYDHFFKVNIHMKSYKNSVLNIPLTF-ADNHLSSKMHTAKLMVGK-K 281
           +L       S  PS    F  N+   + +   L +P  F  +N +  +     LM  K K
Sbjct: 238 LLPKGAESCSLDPS---CFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGK 297

Query: 282 QWKVKLKHYERC--IRFSGGWAEFFRQNNLKSGDSCLFKLLTKN 321
            W + LK  + C       GW  F   N L++G    FKL+ K+
Sbjct: 298 SWTLDLKLKKSCGTSLIRRGWRSFCSANGLRAGSIITFKLIKKS 322

[Close]

BLAST of Cmc08g0212531 vs. TAIR 10
Match: AT2G24700.1 (Transcriptional factor B3 family protein )

HSP 1 Score: 83.2 bits (204), Expect = 4.3e-16
Identity = 83/316 (26.27%), Postives = 131/316 (41.46%), Query Frame = 0


Query: 26  MEWKVESTTTPNGTVWLRNGWQEFSNHYGLKSGSLLVFRLDGNSTFHTLIFNQNCSEIQY 85
           M WKV+          L NGW++F+  + L+ G ++VFR +G   FH      +C EIQY
Sbjct: 55  MTWKVKIDGRR-----LSNGWEDFTIAHDLRVGDIVVFRQEGELVFHVTALGPSCCEIQY 114

Query: 86  SSNHVGDVESNQ----EEYSTRPQT--EETEAKPEK---IGFKIAVKKSYIEGRYNMLIP 145
             + + + +  +    E  S++ ++   E E+ P+      F   V  S ++ R  + IP
Sbjct: 115 GEDTLEEDKIEKLCGTENVSSKKKSLKREAESAPDNSLDSCFVATVTGSNLK-RDTLYIP 174

Query: 146 KCFARRHLNEEFGKIEIENSDGMSWPMIYKWSQSRKVEFAYISSGWKAFAKENHLKEGHI 205
           K FA  +      +I + N +G SW +  +        F Y+  GW++F   N  K G +
Sbjct: 175 KEFALSNGLMNKYQIVLMNEEGESWKIDLRREAYNYGRF-YMRRGWRSFCIANGKKPGDV 234

Query: 206 LFFQLIKKGH------FLFTLEGIIPPSSPILANNENVESTTPSYD-HFFKVNIHMKSYK 265
             F+L+K         F  T+E +    S         E+   S D   F   +   +  
Sbjct: 235 FAFKLVKNEETPMIQLFPMTIEDLDKLQSLPRHKIRKTEAAPSSPDLSSFVATVTASNLS 294

Query: 266 NSVLNIPLTF-ADNHLSSKMHTAKLMVGKKQWKVKLKHYERCIRF--SGGWAEFFRQNNL 323
              L +P TF   N L  K     +    + W + +KH     RF    GW  F   N  
Sbjct: 295 RDRLYLPKTFIMSNGLLKKFQMCLMNEEGESWTIDVKHEAHTGRFLTIRGWRRFCVANGK 354

[Close]

BLAST of Cmc08g0212531 vs. TAIR 10
Match: AT4G31680.1 (Transcriptional factor B3 family protein )

HSP 1 Score: 79.0 bits (193), Expect = 8.2e-15
Identity = 79/333 (23.72%), Postives = 143/333 (42.94%), Query Frame = 0


Query: 2   IPKKFITDY--GKFLSNPICLKPPDGME-WKVESTTTPNGTVWLRNGWQEFSNHYGLKSG 61
           IP KF +++  GK     + L+       W+V+          L  GW+EF   + L+  
Sbjct: 28  IPVKFFSEHIEGKHEGETVKLRADASKRTWEVKMDGNR-----LTEGWKEFVEAHDLRIR 87

Query: 62  SLLVFRLDGNSTFHTLIFNQNCSEIQY-------SSNHVGDVESNQEEYSTRPQTEETEA 121
             +VFR +G+  FH      +C EIQY            G+VE ++ E     Q E  ++
Sbjct: 88  DFVVFRHEGDMVFHVTALGPSCCEIQYPQSISHEEGEESGEVEISEREVEENLQKEYDQS 147

Query: 122 KPEKIGFKIAVKKSYIEGRYNMLIPKCFARRH-LNEEFGKIEIENSDGMSWPMIYKWSQS 181
             +   F  +V  S I     + +P+ FA+R+ L++   +I + N +G SW    +   S
Sbjct: 148 SADLNCFSQSVTHSNISNDL-VTLPRDFAKRNGLDKGMHEIVLMNEEGKSWESEVRSRMS 207

Query: 182 RKVEFAYISSGWKAFAKENHLKEGHILFFQLIKKGHFLFTLEGIIPPSSPILANNENVES 241
            +V   +I  GWK+   EN LK G    F+L++               +P+      +  
Sbjct: 208 GQV---FIVGGWKSLCSENKLKGGDSCTFKLLQNA------------KTPVFQLCSRIGE 267

Query: 242 TTPSYDHFFKVNIHMKSYKNSVLNIPLTFADNHLSSKMHTAKLMVGKK---QWKVKLKHY 301
           +      F K+   + S +    ++P++F     +  +H  ++++  K   +W +KL+  
Sbjct: 268 S-----RFVKLTPTLNSLEIGKQHLPVSFTKG--NGLIHPGEIILVDKDRVEWSMKLQVD 327

Query: 302 ER-CIRFSGG--WAEFFRQNNLKSGDSCLFKLL 318
            R  +   GG  W  F   N + +G+S   +L+
Sbjct: 328 NRGGMHIFGGNDWKSFCAANEVGAGESLTLELI 332

The following BLAST results are available for this feature:

BLAST of Cmc08g0212531 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743781.1	2.9e-179	92.12	B3 domain-containing transcription factor VRN1-like [Cucumis sativus]	[more]
KAE8647490.1	2.9e-179	92.12	hypothetical protein Csa_003352 [Cucumis sativus]	[more]
TYK12921.1	1.8e-168	89.43	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucumis melo var...	[more]
XP_022132590.1	9.2e-85	42.82	B3 domain-containing transcription factor VRN1-like isoform X2 [Momordica charan...	[more]
XP_022132589.1	9.2e-85	42.82	B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charan...	[more]

BLAST of Cmc08g0212531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	1.4e-22	28.23	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q84WP3	1.7e-20	26.51	B3 domain-containing protein REM17 OS=Arabidopsis thaliana OX=3702 GN=REM17 PE=2...	[more]
Q8GYM4	7.7e-18	29.58	B3 domain-containing protein REM14 OS=Arabidopsis thaliana OX=3702 GN=REM14 PE=2...	[more]
P0DH85	6.1e-15	26.27	B3 domain-containing protein REM10 OS=Arabidopsis thaliana OX=3702 GN=REM10 PE=1...	[more]
Q8H2D1	1.2e-13	23.72	B3 domain-containing protein REM8 OS=Arabidopsis thaliana OX=3702 GN=REM8 PE=2 S...	[more]

BLAST of Cmc08g0212531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CM75	8.5e-169	89.43	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucumis melo v...	[more]
A0A0A0KFK0	4.8e-156	83.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489960 PE=4 SV=1	[more]
A0A6J1BU95	4.5e-85	42.82	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Momordica char...	[more]
A0A6J1BTG9	4.5e-85	42.82	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica char...	[more]
A0A6J1BT74	3.7e-79	42.48	B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=36...	[more]

BLAST of Cmc08g0212531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	9.7e-24	28.23	AP2/B3-like transcriptional factor family protein	[more]
AT1G26680.1	1.2e-21	26.51	transcriptional factor B3 family protein	[more]
AT2G24645.1	5.5e-19	29.58	Transcriptional factor B3 family protein	[more]
AT2G24700.1	4.3e-16	26.27	Transcriptional factor B3 family protein	[more]
AT4G31680.1	8.2e-15	23.72	Transcriptional factor B3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 1..79 e-value: 3.3E-6 score: 36.6 coord: 238..329 e-value: 1.8E-11 score: 54.1 coord: 118..215 e-value: 8.2E-12 score: 55.2
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 1..77 e-value: 3.2E-11 score: 43.0 coord: 238..320 e-value: 4.7E-13 score: 48.9 coord: 122..207 e-value: 2.2E-16 score: 59.6
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 1..79 score: 14.95952
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 238..331 score: 12.830194
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 118..215 score: 13.619878
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 118..211 e-value: 7.05843E-18 score: 75.8273
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 1..77 e-value: 1.37506E-12 score: 61.1897
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 237..325 e-value: 7.7366E-13 score: 61.9601
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 1..80 e-value: 7.4E-18 score: 66.3
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 222..331 e-value: 2.2E-22 score: 81.1 coord: 96..214 e-value: 8.6E-23 score: 82.4
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 1..86
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 113..210
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 233..320
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 231..330 coord: 105..209
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 231..330 coord: 1..99 coord: 105..209
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0212531.1	Cmc08g0212531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding