Cmc08g0211721 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0211721
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	TPD1 protein homolog 1-like
Location	CMiso1.1chr08: 2846384 .. 2847880 (-)
RNA-Seq Expression	Cmc08g0211721
Synteny	Cmc08g0211721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTCTGGGTAGGTATAGGAGTTTCCTTTCTTCCGACCAAATAAACACCAATTGCCAAGTTCAATTACTCTTCTCCCACCAACGACTATGAGAAGAAGATTCAATCTGAACCCACAGACAAGTAAATAAATAACGCCGCACATCAAAAGCCGACATCCCCTGTTTTTGGCGGCGGCTCTGTAAATTGCACCAAAAAGGATAAACCTTTCCCCTTCCCCACCCTCCCTCTTTCTGATCTTGATCCACCCAGTTTGAGCAATCCATATCCCCTCTTACACCTTACGCCCTCCCCTTTAATGGCGGCCATCCCCACTTCACTTTGCTTTTACATCTCTACTCCTCTCCATGTTTTCTTACTCCTCCTCTTCTTCATCGAATTCTGCACCGACTTCATACAATATCCCCAAACTTAGTCAACCAGCTACCAGACTAACTATTCTTTGACTCATATAAACCATTTTGTTTACACGTGTGCTCACTCCATTCCTTTTAGATTCCTTGTCGCCTCTTCGTAAATGTCTTTTATATACTCCCCTTTTTAAGCTAATTCAGAAACAAAGTGAACTCAGACATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGGTAATACTCTTCTTTTCTTTTGATCTATTCATCTCTAATCTGTTAATCTACTGCATCTTCTTCCCCATCTGACTTACTTTTATACCCATCTTTTTCTTTTTCTTTTTTCGTTTTGGGTGGATTCAGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGTAAGAAATTCATTCTTACCTATGAAAATTAGATTGTTGTTCTTTACGTATATACCATGAATCTCTGATCTAAATAGGTAAAGAGATGAATCGTATTGGTTCGGAATGTTCAAAAAAAGATATCATTATATTTCAAGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAACTTTACAAGTCTTTGAACAAACAGTCGATGAACCTTAAGAATTGTCTGTGATCAATCAATATTCTAGGAAATCCATCTTCTATATATATATATACATTATGGTTGAGATATGAATCCATATTCTTCCCACACATATCGATTGATCATCATCAAAAGTTCATTTTCCAAAAGATCAAACCTTCGATGTAGAATCTCTTATTCTCTGTCAATTCTCAGATGTTTTAGCA

mRNA sequence

GGTGTCTGGGTAGGTATAGGAGTTTCCTTTCTTCCGACCAAATAAACACCAATTGCCAAGTTCAATTACTCTTCTCCCACCAACGACTATGAGAAGAAGATTCAATCTGAACCCACAGACAAGTAAATAAATAACGCCGCACATCAAAAGCCGACATCCCCTGTTTTTGGCGGCGGCTCTGTAAATTGCACCAAAAAGGATAAACCTTTCCCCTTCCCCACCCTCCCTCTTTCTGATCTTGATCCACCCAGTTTGAGCAATCCATATCCCCTCTTACACCTTACGCCCTCCCCTTTAATGGCGGCCATCCCCACTTCACTTTGCTTTTACATCTCTACTCCTCTCCATGTTTTCTTACTCCTCCTCTTCTTCATCGAATTCTGCACCGACTTCATACAATATCCCCAAACTTAGTCAACCAGCTACCAGACTAACTATTCTTTGACTCATATAAACCATTTTGTTTACACGTGTGCTCACTCCATTCCTTTTAGATTCCTTGTCGCCTCTTCGTAAATGTCTTTTATATACTCCCCTTTTTAAGCTAATTCAGAAACAAAGTGAACTCAGACATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGTATTGGTTCGGAATGTTCAAAAAAAGATATCATTATATTTCAAGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAACTTTACAAGTCTTTGAACAAACAGTCGATGAACCTTAAGAATTGTCTGTGATCAATCAATATTCTAGGAAATCCATCTTCTATATATATATATACATTATGGTTGAGATATGAATCCATATTCTTCCCACACATATCGATTGATCATCATCAAAAGTTCATTTTCCAAAAGATCAAACCTTCGATGTAGAATCTCTTATTCTCTGTCAATTCTCAGATGTTTTAGCA

Coding sequence (CDS)

ATGAAAGGTGGTGGTGCTTTTCACAGATTTTGCCTCTGTTTTCTCCTTGCAATCTTTCTTGGTAATGAATTCAAGTTGGTTCATTTGAGAGTTCTTCAGGCAGCTGCAAGAGAAAACAGAAATGGGATTTCTTCGATGTCGCTTCAATCTTCTAATAGTGGTAAAGAGATGAATCGTATTGGTTCGGAATGTTCAAAAAAAGATATCATTATATTTCAAGGCCCAGCAACTCCACTACCGGGTGGGATTCCAACATACATAGTTCAGATCTTGAACTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTGAAATGTGGATGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAAGCGAGTCAGTTATGATGACTGCCTTGTCAATGATGGTCGGGCTCTTGGTCCTGGTCGAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTATCTTCTGCAACTTGTTCTTTTTAA

Protein sequence

MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF

Homology

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BLAST of Cmc08g0211721 vs. NCBI nr
Match: XP_008440085.1 (PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 1.5e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 165
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 164

[Close]

BLAST of Cmc08g0211721 vs. NCBI nr
Match: XP_008440086.1 (PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 1.6e-85
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 165
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of Cmc08g0211721 vs. NCBI nr
Match: TYK12989.1 (TPD1 protein-like protein 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 4.6e-85
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GSECSK+DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKEDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 165
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of Cmc08g0211721 vs. NCBI nr
Match: XP_004134986.1 (TPD1 protein homolog 1 isoform X2 [Cucumis sativus] >KGN49042.1 hypothetical protein Csa_004146 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 158/163 (96.93%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCL FLL IFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GS C+K DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 164
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of Cmc08g0211721 vs. NCBI nr
Match: XP_011658115.1 (TPD1 protein homolog 1 isoform X3 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 156/163 (95.71%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCL FLL IFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLWFLLTIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GS C+K DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 164
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 161

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BLAST of Cmc08g0211721 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-44
Identity = 79/125 (63.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 38  ENRNGISSMSLQSSNSGKEMNRIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASD 97
           ENR  +S   L S + G   NRIG +CSK DI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 98  CSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSV 157
           C+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVNDG+ LGPG++LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 158 SSATC 163
           +S +C
Sbjct: 174 ASVSC 178

[Close]

BLAST of Cmc08g0211721 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.9e-35
Identity = 69/123 (56.10%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 46  MSLQSSNSGK-----EMNRIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSI 105
           M L S  +GK     E  RIG +C   DI++ Q    P+P GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 106 SNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSA 164
           S IH+ CGWFSSA+L+NPR+FKR+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+  
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of Cmc08g0211721 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-31
Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 54  GKEMNRIGSECS-KKDIIIFQGPATPLPGGIPTYIVQILNSCA------SDCSISNIHVK 113
           G    R+   C+   DI I+QG ATPLP G+P Y V ++N CA       +C+I+ IHV+
Sbjct: 104 GVRTRRVDDGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVR 163

Query: 114 CGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATC 163
           CGWFSS  LV+PR+F+R+ +DDCL+NDGR L  G T+SF+Y N+FPY LSVS ATC
Sbjct: 164 CGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of Cmc08g0211721 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.4e-25
Identity = 51/115 (44.35%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 50  SSNSGKE-MNRIGSE-CSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKC 109
           S N G+  M R+  + CS+++++++Q  A  LP GIPTY V+I+N C + C++ ++H+ C
Sbjct: 55  SPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVCTA-CTVYDVHISC 114

Query: 110 GWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATC 163
           G F+SA LV+P  F+R+ ++DCLV  G  LGP   +SFQY+N+F YPL+V++  C
Sbjct: 115 GEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of Cmc08g0211721 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-06
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 88  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSF 147
           V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 148 QYANTFPYPL 156
            Y+NT  + L
Sbjct: 110 NYSNTHQFAL 117

[Close]

BLAST of Cmc08g0211721 vs. ExPASy TrEMBL
Match: A0A1S3AZV4 (TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.3e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 165
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 164

[Close]

BLAST of Cmc08g0211721 vs. ExPASy TrEMBL
Match: A0A1S3B0B6 (TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.6e-86
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 165
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of Cmc08g0211721 vs. ExPASy TrEMBL
Match: A0A5D3CRM1 (TPD1 protein-like protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005860 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.2e-85
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCLCFLLAIFL  EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLCFLLAIFL--EFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GSECSK+DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSECSKEDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 165
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCSF 162

[Close]

BLAST of Cmc08g0211721 vs. ExPASy TrEMBL
Match: A0A0A0KL27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.4e-85
Identity = 158/163 (96.93%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MKGGGAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60
           MKGGGAFHRFCL FLL IFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI
Sbjct: 1   MKGGGAFHRFCLWFLLTIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRI 60

Query: 61  GSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120
           GS C+K DIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI
Sbjct: 61  GSRCAKDDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRI 120

Query: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 164
           FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS
Sbjct: 121 FKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 163

[Close]

BLAST of Cmc08g0211721 vs. ExPASy TrEMBL
Match: A0A6J1GDB1 (TPD1 protein homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453150 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.5e-60
Identity = 117/159 (73.58%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 5   GAFHRFCLCFLLAIFLGNEFKLVHLRVLQAAARENRNGISSMSLQSSNSGKEMNRIGSEC 64
           GAF  F LCF  ++FL   FKLV L V+QAAARE  +GIS MSLQSS +G+ MNR+GSEC
Sbjct: 4   GAFRSFFLCF--SLFLA--FKLVRLSVVQAAAREKNSGISWMSLQSSKTGRGMNRVGSEC 63

Query: 65  SKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRV 124
           SK ++++FQG   PLP GIP++IVQILNSC+S CSISNIH+KCGWFSSARLVNPRIF+RV
Sbjct: 64  SKDEVVVFQGQTAPLPDGIPSFIVQILNSCSSGCSISNIHMKCGWFSSARLVNPRIFRRV 123

Query: 125 SYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSATCS 164
            YDDCL+NDG+ALGPG+TLSFQYANTFPYPLSVSS TCS
Sbjct: 124 KYDDCLINDGKALGPGQTLSFQYANTFPYPLSVSSVTCS 158

[Close]

BLAST of Cmc08g0211721 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 180.6 bits (457), Expect = 9.9e-46
Identity = 79/125 (63.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 38  ENRNGISSMSLQSSNSGKEMNRIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASD 97
           ENR  +S   L S + G   NRIG +CSK DI++FQG   PLP G+P+Y V+I NSC SD
Sbjct: 54  ENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSD 113

Query: 98  CSISNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSV 157
           C+I+ IHV CGWFSS RLVNPR+F+R+ YDDCLVNDG+ LGPG++LSFQYAN+F YPLSV
Sbjct: 114 CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSV 173

Query: 158 SSATC 163
           +S +C
Sbjct: 174 ASVSC 178

[Close]

BLAST of Cmc08g0211721 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-36
Identity = 69/123 (56.10%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 46  MSLQSSNSGK-----EMNRIGSECSKKDIIIFQGPATPLPGGIPTYIVQILNSCASDCSI 105
           M L S  +GK     E  RIG +C   DI++ Q    P+P GIP Y+V+I N C S C I
Sbjct: 54  MLLLSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCII 113

Query: 106 SNIHVKCGWFSSARLVNPRIFKRVSYDDCLVNDGRALGPGRTLSFQYANTFPYPLSVSSA 164
           S IH+ CGWFSSA+L+NPR+FKR+ YDDCLVN+G+ L  G TLSF YANTFPY LSV+  
Sbjct: 114 SRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFV 173

[Close]

BLAST of Cmc08g0211721 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 88  VQILNSCASDCSISNIHVKCGWFSSARLVNPRIFKRVSYD--DCLVNDGRALGPGRTLSF 147
           V+++N C   C I N+ +KC  F  + LV+P   + +S    +C+VNDG  L P +TLSF
Sbjct: 50  VEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 148 QYANTFPYPL 156
            Y+NT  + L
Sbjct: 110 NYSNTHQFAL 117

The following BLAST results are available for this feature:

BLAST of Cmc08g0211721 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440085.1	1.5e-88	100.00	PREDICTED: TPD1 protein homolog 1-like isoform X1 [Cucumis melo]	[more]
XP_008440086.1	1.6e-85	98.78	PREDICTED: TPD1 protein homolog 1-like isoform X2 [Cucumis melo]	[more]
TYK12989.1	4.6e-85	98.17	TPD1 protein-like protein 1-like isoform X2 [Cucumis melo var. makuwa]	[more]
XP_004134986.1	1.7e-84	96.93	TPD1 protein homolog 1 isoform X2 [Cucumis sativus] >KGN49042.1 hypothetical pro...	[more]
XP_011658115.1	1.4e-81	95.71	TPD1 protein homolog 1 isoform X3 [Cucumis sativus]	[more]

BLAST of Cmc08g0211721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3T1	1.4e-44	63.20	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
Q6TLJ2	5.9e-35	56.10	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
Q2QR54	1.8e-31	53.45	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
Q8S6P9	9.4e-25	44.35	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
A8MS78	2.6e-06	40.00	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of Cmc08g0211721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZV4	7.3e-89	100.00	TPD1 protein homolog 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
A0A1S3B0B6	7.6e-86	98.78	TPD1 protein homolog 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484668 P...	[more]
A0A5D3CRM1	2.2e-85	98.17	TPD1 protein-like protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KL27	8.4e-85	96.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511090 PE=4 SV=1	[more]
A0A6J1GDB1	2.5e-60	73.58	TPD1 protein homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453150 PE=4 S...	[more]

BLAST of Cmc08g0211721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32583.1	9.9e-46	63.20	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G24972.1	4.2e-36	56.10	tapetum determinant 1	[more]
AT1G05835.1	1.8e-07	40.00	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF67	PROTEIN TAPETUM DETERMINANT 1	coord: 50..163
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 50..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0211721.1	Cmc08g0211721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
biological_process	GO:0009408	response to heat