Cmc08g0208921 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0208921
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RAB GTPase homolog A1C
Location	CMiso1.1chr08: 1452170 .. 1455172 (+)
RNA-Seq Expression	Cmc08g0208921
Synteny	Cmc08g0208921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATCTTGTCCTTTCTACTCCAAGTTTCAATTTTTGAGAAGTGACGCTTTTAAAGTGTTCTTACTCTTGCCGGCTTCTAAGACCAACCCAACCCCCTCTACCTGAGCAGACCTCCTTCGCCTTTCCCACAAAACAAACAAACAAACAAACAAAGGGTAAATTTCAAAGACCAAAAAAGCACCGCCCCGATAAAAAAGAAGAGATTTTTACGGTGTTTGTGAGAGAGAAAGTCGCTTGATCTAAAGAAAACAGGATCCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCCGCGGCTGGAGGGAGGGCTTCAGAAAAATGTCTGCTTACAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTTTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCTCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGCGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATCAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGGTGTTTTTTCTTCTTCCTTTCGCCTTTTATGTGCTTACTATGGTTCTGATTTCATATTTTGTGATCTGGGTCCTTGTCTTTTTAGGTGGAAATATTGTGTCGCATATGGGGCTCTGCTCTTGTGTTATTGTTTTCTCTTTCTTTTGCTTCTTCTGATTTTCAAATGTACATGCTCCTAATAAAATTGCTTTTCAAGCTTCGATTAGTCTTAATTATCGTCTTTGTTTGGTTTAGATTATGCTTGTTCATTTGGTTCGATAGGTTAGTTATTGATTGCAATGAGGTACCTGACGGTTTGGTGGATCTAAGCTAAAAGACGTTTGTTAGAGCTTAGAATACTATTATATAACCGGATGTTGCCTTCCCTTGTCATTTTCCCCCACATCAAATCCTCAATTCACTATATAGGTCGATTGTCCTCTCTAGTGTTTCCACGTGAGGGAGGGGTATTTTTGTGTTTTCTGTTGTATCAATGCCATGAATATGAGTTAAAAATGTAAGTTAATGTGGAAACTTTGTTAATTTTTAAAATTGAAATTTACTGTCTAGAGGTTGAGAGATATTTTAGGAGAAAATTGAGTTATGTTTTGTTGTCTAATTTGCATCAGTACTTGTTACCTAGATCACAGAAATCATCCTACCGCTATCGTGCTAGATGCGACCTTGTCCTGTAAAACAGCATGGAGAAAGGAACAAGTGAGATAGCAAATCAAGCCTTCCAATCAGATTTCAATATGCAAAGCTTTTTGCAAAACTCCAAATGCAGTTTCGTTTGGTTATCATGCATATGCTATAAACATGTCTTTAGGCTTAAAGCAGAAGGTCCCTTCGCTTAATTTGTAATTCAGGCATTACGTGGTTGCCAGTATGAATTGGACAAGCAGATGCACCCAAAGATCTTGAGTATGTTAGATGATTGATCGGCTGCAACATGCATTTTCGAAAAACATGCTGTTCTTTAACTTTTCTCTTCCAAATAATTGTCTTTCCATTTTTAGCAACCGTGTTAGGTTATTCCACCTCTATTAGTGTTGATTTATAATGTGGAGAAAAGTTCACCTCTTCAATTAGTGTTTGGGGTTTAAAGATCAGGGGAATATATATACACACACACATATATATATTGAAATGAGGGGAATATCAATTAGTAGTATATCATTTGTTAAACTGGTATTAAGAGGCCTGTGGGCCGTGTCTATCGTCTATATGAAGATTTAATTCAAAGTTCGATGCATATCTCCTACTGATGTAGAGATGGTTGCAGGGAGTGTTTAAGTTATAAAACATATGAGATTCTTTCGCCTCTTTTACTAGTTTATGGGGTTGACCGAACAGAACCCACTTTTTCTGTAGCAATAAGATTTATCTTCAATATCTTGTATATCAGGAAAAAGTGGTTCCATTCTCATTTTAACAAGGGAGAGATAGCTGTTAGGTAGTTGTGTTGTCACGTTTAGCACCCTAATGCGAGCAAATTAGGATGCGATTGGAAAAGTTTTCTTTAGTGCCTGTATATATGGCTCCGGCACGTATGATTGTTGGAGTGAACAAACCTTTTCCGTACTGAAGATGGGATATTTACCTGTGTGACAGACTTTTAACTTAGTTTGGTCTTAAAATATCTCTACTTGCTTTACTTTTCGACATCTCCTTTATCATCTTTTCTTAAATTTACAGTTATAGGGCGATTACAAGTGCATACTATAGAGGAGCAGTTGGTGCCCTGCTAGTGTACGATGTCACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCACACCGATCCCAACATTGTAGTAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTGTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAACGTCGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGAAACAAATGATGATGCTGCTGCATCAGCCGTTATAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAGACTACCAATCTCTGAAGCTGCTGAAGCAAAGCAGCAGACTGTCTCCTCGCTCGACATCTATTTTACATTTTGTTTTAAATATAGTACACCGTGGTTGTGTGAAATTTTTTCCAGGGATGCATAGAGGTAGGGGGGATTGATGGGGGAATGATTTGATGTATCTTATTGTTTTGGTTACTGATATTTTTGACTTATGATGCCGAACATACTGAAGCTTAAGCTGATTAAACCTGGGAATTTGGGAATTACAGTTTTATACTCAATCGACTTTGAGGGACGTTTTTGTGTTTCCAAGTACAGAATTGTTGTGGCTCTTGGTTTCAAGGCTTCTAGATTTGTTTCAACTCTTTGTGGG

mRNA sequence

TAATCTTGTCCTTTCTACTCCAAGTTTCAATTTTTGAGAAGTGACGCTTTTAAAGTGTTCTTACTCTTGCCGGCTTCTAAGACCAACCCAACCCCCTCTACCTGAGCAGACCTCCTTCGCCTTTCCCACAAAACAAACAAACAAACAAACAAAGGGTAAATTTCAAAGACCAAAAAAGCACCGCCCCGATAAAAAAGAAGAGATTTTTACGGTGTTTGTGAGAGAGAAAGTCGCTTGATCTAAAGAAAACAGGATCCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCCGCGGCTGGAGGGAGGGCTTCAGAAAAATGTCTGCTTACAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTTTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCTCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGCGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATCAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGTTATAGGGCGATTACAAGTGCATACTATAGAGGAGCAGTTGGTGCCCTGCTAGTGTACGATGTCACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCACACCGATCCCAACATTGTAGTAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTGTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAACGTCGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGAAACAAATGATGATGCTGCTGCATCAGCCGTTATAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAGACTACCAATCTCTGAAGCTGCTGAAGCAAAGCAGCAGACTGTCTCCTCGCTCGACATCTATTTTACATTTTGTTTTAAATATAGTACACCGTGGTTGTGTGAAATTTTTTCCAGGGATGCATAGAGGTAGGGGGGATTGATGGGGGAATGATTTGATGTATCTTATTGTTTTGGTTACTGATATTTTTGACTTATGATGCCGAACATACTGAAGCTTAAGCTGATTAAACCTGGGAATTTGGGAATTACAGTTTTATACTCAATCGACTTTGAGGGACGTTTTTGTGTTTCCAAGTACAGAATTGTTGTGGCTCTTGGTTTCAAGGCTTCTAGATTTGTTTCAACTCTTTGTGGG

Coding sequence (CDS)

ATGTCTGCTTACAGAGCTGAAGATGACTATGACTATCTCTTCAAGGTCGTTTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCTCGCTTTACCAAAAACGAGTTCAGCCTCGAATCTAAGTCTACTATTGGCGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATCAAGGCTCAGATTTGGGACACTGCTGGCCAAGAACGTTATAGGGCGATTACAAGTGCATACTATAGAGGAGCAGTTGGTGCCCTGCTAGTGTACGATGTCACACGACACTCCACATATGAAAATGTTGAGAAGTGGTTGAAGGAGTTGAGAGATCACACCGATCCCAACATTGTAGTAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTGTCAACCGAGGATGCAAAATCATTTGCCGAGACAGAGTCCCTGTATTTCATGGAAACCTCTGCCCTTGAAGCCACAAACGTCGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGAAACAAATGATGATGCTGCTGCATCAGCCGTTATAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCTGAGGTAAAGAAAGGCGGTTGCTGTTCCAGCTAG

Protein sequence

MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS

Homology

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BLAST of Cmc08g0208921 vs. NCBI nr
Match: XP_004134652.1 (ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-related protein RABA1c-like [Cucumis melo] >ADN34029.1 GTP-binding protein [Cucumis melo subsp. melo] >KAA0052607.1 ras-related protein RABA1c [Cucumis melo var. makuwa] >KGN49321.1 hypothetical protein Csa_002721 [Cucumis sativus] >TYK13220.1 ras-related protein RABA1c [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-114
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. NCBI nr
Match: XP_038892728.1 (ras-related protein RABA1c-like [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 8.1e-114
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAME NDDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMEANDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. NCBI nr
Match: XP_022926120.1 (ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related protein RABA1c-like [Cucurbita maxima] >XP_023544519.1 ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG6581369.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414.1 bits (1063), Expect = 7.6e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. NCBI nr
Match: XP_022142300.1 (ras-related protein RABA1c [Momordica charantia])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 212/218 (97.25%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLD K
Sbjct: 1   MAAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAME +DDAAASAV+AKGEKIDISKDVS VKKGGCCSS
Sbjct: 181 KAMEASDDAAASAVVAKGEKIDISKDVSAVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. NCBI nr
Match: XP_023518462.1 (ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 3.3e-107
Identity = 200/218 (91.74%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE+KSTIGVEFATRSL++DG+
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLETKSTIGVEFATRSLSIDGR 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAETES+YFMETSALE+TNVDNAF EVL QIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDAKSFAETESVYFMETSALESTNVDNAFVEVLKQIYHLVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAME ++DAAAS V+AKGE+IDISKDVSE+KKGGCCSS
Sbjct: 181 KAMEASNDAAASVVLAKGERIDISKDVSEIKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 9.7e-102
Identity = 191/218 (87.61%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHST+ENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEATNV+NAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAME   ++A   V +KG+KIDI KDVS VKKGGCCS+
Sbjct: 181 KAMEAASESA--NVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Cmc08g0208921 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-99
Identity = 186/218 (85.32%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+TNV+NAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAME  +D  +  V +KGEKID+  DVS VKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Cmc08g0208921 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 362.8 bits (930), Expect = 2.6e-99
Identity = 183/216 (84.72%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 2   SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKV 61
           + YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL +DGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVV 121
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHST+ENVE+WLKELRDHTDPNIVV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKK 181
           MLVGNKSDLRHLVAV T++ K+FAE ESLYFMETSALE+TNV+NAFAEVLTQIY IVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 AMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCS 218
           ++E  DDA +     KGEKI+I  DVS VKKGGCCS
Sbjct: 183 SVEAGDDAGSGP--GKGEKINIKDDVSAVKKGGCCS 216

[Close]

BLAST of Cmc08g0208921 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 3.9e-95
Identity = 176/218 (80.73%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT+SLN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TYENV +WLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVST++AK  AE E LYFMETSALEATNV+NAF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KA+E  D+ A S+   KGE I+I  + S  KK GCCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.7e-94
Identity = 174/218 (79.82%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +T+ENV++WLKEL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEATNV++AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           K +E  +D  AS  + KGEKI++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNAS--VPKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Cmc08g0208921 vs. ExPASy TrEMBL
Match: A0A5D3CP64 (Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008350 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.1e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. ExPASy TrEMBL
Match: E5GC30 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.1e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. ExPASy TrEMBL
Match: A0A0A0KNM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.1e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. ExPASy TrEMBL
Match: A0A1S3B019 (ras-related protein RABA1c-like OS=Cucumis melo OX=3656 GN=LOC103484436 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.1e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. ExPASy TrEMBL
Match: A0A6J1IU78 (ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.7e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of Cmc08g0208921 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 370.9 bits (951), Expect = 6.9e-103
Identity = 191/218 (87.61%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHST+ENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEATNV+NAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAME   ++A   V +KG+KIDI KDVS VKKGGCCS+
Sbjct: 181 KAMEAASESA--NVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Cmc08g0208921 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-100
Identity = 186/218 (85.32%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+TNV+NAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           KAME  +D  +  V +KGEKID+  DVS VKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Cmc08g0208921 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 345.1 bits (884), Expect = 4.0e-95
Identity = 174/218 (79.82%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +T+ENV++WLKEL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEATNV++AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 219
           K +E  +D  AS  + KGEKI++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNAS--VPKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Cmc08g0208921 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 334.0 bits (855), Expect = 9.3e-92
Identity = 168/220 (76.36%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENVE+WLKELRDHT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           +MLVGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALEA NV+NAF EVL+QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISK--DVSEVKKGGCCSS 219
           KA++  DD      + KG+ I++    DVSEVKK GCCSS
Sbjct: 181 KALDIGDD---HTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of Cmc08g0208921 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 334.0 bits (855), Expect = 9.3e-92
Identity = 168/220 (76.36%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENVE+WLKELRDHTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
           +M VGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALE+ NV+NAF EVL+QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KAMETNDDAAASAVIAKGEKIDISK--DVSEVKKGGCCSS 219
           KA++  DD AA   + KG+ I++    DVS VKK GCCS+
Sbjct: 181 KALDIGDDPAA---LPKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Cmc08g0208921 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134652.1	1.3e-114	100.00	ras-related protein RABA1c [Cucumis sativus] >XP_008439722.1 PREDICTED: ras-rela...	[more]
XP_038892728.1	8.1e-114	99.08	ras-related protein RABA1c-like [Benincasa hispida]	[more]
XP_022926120.1	7.6e-112	96.79	ras-related protein RABA1c-like [Cucurbita moschata] >XP_022978763.1 ras-related...	[more]
XP_022142300.1	1.3e-111	97.25	ras-related protein RABA1c [Momordica charantia]	[more]
XP_023518462.1	3.3e-107	91.74	ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7026514.1 Ras-r...	[more]

BLAST of Cmc08g0208921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK68	9.7e-102	87.61	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
Q9SN35	2.0e-99	85.32	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
P40393	2.6e-99	84.72	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]
Q01111	3.9e-95	80.73	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q39222	5.7e-94	79.82	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]

BLAST of Cmc08g0208921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP64	6.1e-115	100.00	Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GC30	6.1e-115	100.00	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KNM1	6.1e-115	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519720 PE=4 SV=1	[more]
A0A1S3B019	6.1e-115	100.00	ras-related protein RABA1c-like OS=Cucumis melo OX=3656 GN=LOC103484436 PE=4 SV=...	[more]
A0A6J1IU78	3.7e-112	96.79	ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111478625 PE=4...	[more]

BLAST of Cmc08g0208921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45750.1	6.9e-103	87.61	RAB GTPase homolog A1C	[more]
AT4G18800.1	1.4e-100	85.32	RAB GTPase homolog A1D	[more]
AT1G16920.1	4.0e-95	79.82	RAB GTPase homolog A1B	[more]
AT3G15060.1	9.3e-92	76.36	RAB GTPase homolog A1G	[more]
AT5G60860.1	9.3e-92	76.36	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 53.93 coord: 152..174 score: 40.43 coord: 37..53 score: 36.77 coord: 14..35 score: 55.22 coord: 117..130 score: 54.65
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..215 e-value: 6.4E-6 score: 34.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 3.2E-111 score: 385.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 4.3E-24 score: 96.0
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..218
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..218
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 35.278893
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..189 score: 10.760118
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 2.38442E-127 score: 354.559
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 4.3E-13 score: 47.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 3.5E-61 score: 205.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..218 score: 16.012314
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..216 e-value: 1.1E-72 score: 245.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..182
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 6.8E-41 score: 137.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0208921.1	Cmc08g0208921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding