Cmc08g0208811 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTCATAATTTTGGTTTTAAATAAAAAGAACCAATTTTAAACTTTAAAAAGTAAAAAAGAGAGAATTGTAAATGTGTAAGCAGTCGACCGTTACACCGAACCTAACGCCAAGGCTATTCCTTCCCTACCCTACTTCTTCCTCCTCCTCTTCAAATTCTCTTCCTCCAACTTCGGTCCTTTCTTCATCATTTCAACCATGGTCTCCAAGATCATCAAAAGATCCCCCACACACCCCTTCCGCCGCCACCGCCGCAAGTCTCCAATCAAGAATGCCTCCTCCGCCGTCGTTGCCACCATCAACCGCTCTCTCTACACCTGCCACCGCCGTCTTCTCAAGATCTTCTCCAAGCTGGCCCGTATCAGCACTCCCAACCGCCACAAAGGCTACAAATCATTGAGAAAAACCTCTTCTTCCTCCTCTTCCTCCTCTGAATCCGACATTGTCCGAACCCTAGTCTTCGACAACCGTCTCCTCCCTCCTCTCATTTCCCCGGCCAAACGGACCGTTCTCCTCGACCTAGACGAAACTCTGGTCCATTCCAAACTCGATCCACCGCCGAAGAAGTTCGATTTCGTAGTTAGGCCGAGAATCGACGGCGAAATACTCAACTTCTACGTGCTGAAACGCCCCGGTGTGGATCAATTTCTTGAAGCCCTAGCGGATAAATTCGAAATCGTGGTGTTCACAGCGGGATTGAAGGAATACGCGTCGCTTGTGTTGAACCATTTGGACAAGAAATCGGTGATTTCACACAGACTGTATCGCGATTCTTGTAAGGAGGTGGATGGGAAATATGTGAAGGATTTGTCTGAAATCGGGAGGGATTTGAGAAGAGTAGTGATTGTGGATGATAATCCAAATGCTTACGTTTATCAACCGGAAAATGCGATTCCGATTCCCTCGTTCGTGGATGATCCGGCGGACATGGAGCTTCGAAAATTGGTAAGGTTCTTTGAGGTATGTGATTGTTACGATGATATGAGAGATGCTGTAAAGCAGTATCTGAGTAGAGAAGAAGTTTGAAATCGGTGAGTTTGTTTGTTTGTTTGTTGTTCATTGAGATGATATTATATGATTATAATCAAATGTTGAACAGTGAGTGTTCAATTTCAAATGAAAAAAAAGCAACTCTTTTTTTTTTTCCCTCTTTGTGTAATTCAAATTCAATCCATAATAACACAATTAACAGTATAAGATTTGGCAGATGAGAAGTTGTTTTGGGTTTCTTGATGATGATGATGGTGAATATGTAATGATCATTTTGTGCAAGTTTTATCAACATTGATTTGATTTTATTTCGAACTTTTTTACATCACACAATTTTAAAGCTATAAAATAGATAAATACATACAAACATTTCAAATTTGTCTTAATTGAAAATGGTTAAAATGTAAAGACAATAAATTTAGGATCTTTTGATCTATAGGAGCTCTAGTTCATATAAAAATATTAAACAGCATTATAATATTTAAGCTAGAAAATTACTGTAAATAACACAACGGTTGAAAATATTTACAAAATATAACAAAGTTTATTTTAGTTTTTTTTTTATATTTAAAAATAGCCTTTATAAACTATATTATAGGATAAACTTGAAGGATTTGTGTGTGAAAGCTTGTAGTCTTTTAATTAAAGGCTTAATCAATCAATGTATCCTTAGGTTGGCTATTTTGTTTGATACTCTAATATTATTTTTCATCATCATCATTATATTATTATTATTGTTTGATGCTATGATATTAAATCTTAATTCAATTTAAGATTTAAAATAGAAAAGAAGAAGTTAATAAGAATAAATTTAGGGTGGTGTCAAATTTAAGGATGATACCAAGATTTTATTGGCGGCGAGAAAGGAAAAAGGGGAGTTAGGATGCAATCATCAAACGGCCGCTAAAATTTCAACTTCTTCGCCACTTCCGCTGCCACTTTCTTTTCCTTTTCTTTCTTTACCAAATCCAAATTACTACAATTTTTGCTATGACTAAATAGTTTAAGAAATAGATTAAGTTAAATTTTTCATGAAACTAACAATTAAGGTTATCATATACTACAATTTTGAACTACAAAATTTTTGGATTGCTATTGCTATATTTATTTTAAGCTAAATTATAGCTTGTAATTACATATATTATTTAGTCCTTAAAAATATTATAGTGCTCTTTTATACGTGGAAGTTGTATTAATTTTAAAACAAATATGAAATAGGGAGATAATTATATACAACCTAATCTTTATAAGCATATAAATAAGCACACTTTACATTGATAAATCAAACAGTTTTTGCATTAAACTGATGAAAGATTAAAATCAAAGACAAATTGTAAAAACCATGATAAGAATGATATAAATTAGAGTTCCAATTTCCAAACTTATACAATCACTACAATTTAGGATGGTTTTTGGAATTTGTTTTGAATATAAAAGTGATTTTTATTAAAGCGAAAAATGAACGGTTTTTCTCTTTTTTGCTGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAACTGATTGTCATACCAATCGCGTTATCCCC GGTCATAATTTTGGTTTTAAATAAAAAGAACCAATTTTAAACTTTAAAAAGTAAAAAAGAGAGAATTGTAAATGTGTAAGCAGTCGACCGTTACACCGAACCTAACGCCAAGGCTATTCCTTCCCTACCCTACTTCTTCCTCCTCCTCTTCAAATTCTCTTCCTCCAACTTCGGTCCTTTCTTCATCATTTCAACCATGGTCTCCAAGATCATCAAAAGATCCCCCACACACCCCTTCCGCCGCCACCGCCGCAAGTCTCCAATCAAGAATGCCTCCTCCGCCGTCGTTGCCACCATCAACCGCTCTCTCTACACCTGCCACCGCCGTCTTCTCAAGATCTTCTCCAAGCTGGCCCGTATCAGCACTCCCAACCGCCACAAAGGCTACAAATCATTGAGAAAAACCTCTTCTTCCTCCTCTTCCTCCTCTGAATCCGACATTGTCCGAACCCTAGTCTTCGACAACCGTCTCCTCCCTCCTCTCATTTCCCCGGCCAAACGGACCGTTCTCCTCGACCTAGACGAAACTCTGGTCCATTCCAAACTCGATCCACCGCCGAAGAAGTTCGATTTCGTAGTTAGGCCGAGAATCGACGGCGAAATACTCAACTTCTACGTGCTGAAACGCCCCGGTGTGGATCAATTTCTTGAAGCCCTAGCGGATAAATTCGAAATCGTGGTGTTCACAGCGGGATTGAAGGAATACGCGTCGCTTGTGTTGAACCATTTGGACAAGAAATCGGTGATTTCACACAGACTGTATCGCGATTCTTGTAAGGAGGTGGATGGGAAATATGTGAAGGATTTGTCTGAAATCGGGAGGGATTTGAGAAGAGTAGTGATTGTGGATGATAATCCAAATGCTTACGTTTATCAACCGGAAAATGCGATTCCGATTCCCTCGTTCGTGGATGATCCGGCGGACATGGAGCTTCGAAAATTGGTAAGGTTCTTTGAGGTATGTGATTGTTACGATGATATGAGAGATGCTGTAAAGCAGTATCTGAGTAGAGAAGAAGTTTGAAATCGGTGAGTTTGTTTGTTTGTTTGTTGTTCATTGAGATGATATTATATGATTATAATCAAATGTTGAACAGTGAGTGTTCAATTTCAAATGAAAAAAAAGCAACTCTTTTTTTTTTTCCCTCTTTGTGTAATTCAAATTCAATCCATAATAACACAATTAACAGTATAAGATTTGGCAGATGAGAAGTTGTTTTGGGTTTCTTGATGATGATGATGGTGAATATGTAATGATCATTTTGTGCAAGTTTTATCAACATTGATTTGATTTTATTTCGAACTTTTTTACATCACACAATTTTAAAGCTATAAAATAGATAAATACATACAAACATTTCAAATTTGTCTTAATTGAAAATGGTTAAAATGTAAAGACAATAAATTTAGGATCTTTTGATCTATAGGAGCTCTAGTTCATATAAAAATATTAAACAGCATTATAATATTTAAGCTAGAAAATTACTGTAAATAACACAACGGTTGAAAATATTTACAAAATATAACAAAGTTTATTTTAGTTTTTTTTTTATATTTAAAAATAGCCTTTATAAACTATATTATAGGATAAACTTGAAGGATTTGTGTGTGAAAGCTTGTAGTCTTTTAATTAAAGGCTTAATCAATCAATGTATCCTTAGGTTGGCTATTTTGTTTGATACTCTAATATTATTTTTCATCATCATCATTATATTATTATTATTGTTTGATGCTATGATATTAAATCTTAATTCAATTTAAGATTTAAAATAGAAAAGAAGAAGTTAATAAGAATAAATTTAGGGTGGTGTCAAATTTAAGGATGATACCAAGATTTTATTGGCGGCGAGAAAGGAAAAAGGGGAGTTAGGATGCAATCATCAAACGGCCGCTAAAATTTCAACTTCTTCGCCACTTCCGCTGCCACTTTCTTTTCCTTTTCTTTCTTTACCAAATCCAAATTACTACAATTTTTGCTATGACTAAATAGTTTAAGAAATAGATTAAGTTAAATTTTTCATGAAACTAACAATTAAGGTTATCATATACTACAATTTTGAACTACAAAATTTTTGGATTGCTATTGCTATATTTATTTTAAGCTAAATTATAGCTTGTAATTACATATATTATTTAGTCCTTAAAAATATTATAGTGCTCTTTTATACGTGGAAGTTGTATTAATTTTAAAACAAATATGAAATAGGGAGATAATTATATACAACCTAATCTTTATAAGCATATAAATAAGCACACTTTACATTGATAAATCAAACAGTTTTTGCATTAAACTGATGAAAGATTAAAATCAAAGACAAATTGTAAAAACCATGATAAGAATGATATAAATTAGAGTTCCAATTTCCAAACTTATACAATCACTACAATTTAGGATGGTTTTTGGAATTTGTTTTGAATATAAAAGTGATTTTTATTAAAGCGAAAAATGAACGGTTTTTCTCTTTTTTGCTGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAACTGATTGTCATACCAATCGCGTTATCCCC ATGGTCTCCAAGATCATCAAAAGATCCCCCACACACCCCTTCCGCCGCCACCGCCGCAAGTCTCCAATCAAGAATGCCTCCTCCGCCGTCGTTGCCACCATCAACCGCTCTCTCTACACCTGCCACCGCCGTCTTCTCAAGATCTTCTCCAAGCTGGCCCGTATCAGCACTCCCAACCGCCACAAAGGCTACAAATCATTGAGAAAAACCTCTTCTTCCTCCTCTTCCTCCTCTGAATCCGACATTGTCCGAACCCTAGTCTTCGACAACCGTCTCCTCCCTCCTCTCATTTCCCCGGCCAAACGGACCGTTCTCCTCGACCTAGACGAAACTCTGGTCCATTCCAAACTCGATCCACCGCCGAAGAAGTTCGATTTCGTAGTTAGGCCGAGAATCGACGGCGAAATACTCAACTTCTACGTGCTGAAACGCCCCGGTGTGGATCAATTTCTTGAAGCCCTAGCGGATAAATTCGAAATCGTGGTGTTCACAGCGGGATTGAAGGAATACGCGTCGCTTGTGTTGAACCATTTGGACAAGAAATCGGTGATTTCACACAGACTGTATCGCGATTCTTGTAAGGAGGTGGATGGGAAATATGTGAAGGATTTGTCTGAAATCGGGAGGGATTTGAGAAGAGTAGTGATTGTGGATGATAATCCAAATGCTTACGTTTATCAACCGGAAAATGCGATTCCGATTCCCTCGTTCGTGGATGATCCGGCGGACATGGAGCTTCGAAAATTGGTAAGGTTCTTTGAGGTATGTGATTGTTACGATGATATGAGAGATGCTGTAAAGCAGTATCTGAGTAGAGAAGAAGTTTGA MVSKIIKRSPTHPFRRHRRKSPIKNASSAVVATINRSLYTCHRRLLKIFSKLARISTPNRHKGYKSLRKTSSSSSSSSESDIVRTLVFDNRLLPPLISPAKRTVLLDLDETLVHSKLDPPPKKFDFVVRPRIDGEILNFYVLKRPGVDQFLEALADKFEIVVFTAGLKEYASLVLNHLDKKSVISHRLYRDSCKEVDGKYVKDLSEIGRDLRRVVIVDDNPNAYVYQPENAIPIPSFVDDPADMELRKLVRFFEVCDCYDDMRDAVKQYLSREEV Homology
BLAST of Cmc08g0208811 vs. NCBI nr
Match: TYK13228.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 542.3 bits (1396), Expect = 2.3e-150 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cmc08g0208811 vs. NCBI nr
Match: XP_008439711.1 (PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Cucumis melo] >ADN34024.1 carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase [Cucumis melo subsp. melo] >KAA0052598.1 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 542.3 bits (1396), Expect = 2.3e-150 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cmc08g0208811 vs. NCBI nr
Match: XP_011658261.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Cucumis sativus] >KGN49333.1 hypothetical protein Csa_003124 [Cucumis sativus]) HSP 1 Score: 515.4 bits (1326), Expect = 3.1e-142 Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0
BLAST of Cmc08g0208811 vs. NCBI nr
Match: XP_038893028.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Benincasa hispida]) HSP 1 Score: 505.0 bits (1299), Expect = 4.1e-139 Identity = 255/272 (93.75%), Postives = 265/272 (97.43%), Query Frame = 0
BLAST of Cmc08g0208811 vs. NCBI nr
Match: KAG7026508.1 (CTD small phosphatase-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 464.9 bits (1195), Expect = 4.7e-127 Identity = 234/275 (85.09%), Postives = 254/275 (92.36%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy Swiss-Prot
Match: Q9XYL0 (Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum OX=44689 GN=fcpA PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 8.6e-39 Identity = 84/162 (51.85%), Postives = 111/162 (68.52%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy Swiss-Prot
Match: P58465 (CTD small phosphatase-like protein OS=Mus musculus OX=10090 GN=Ctdspl PE=2 SV=3) HSP 1 Score: 159.1 bits (401), Expect = 7.3e-38 Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy Swiss-Prot
Match: Q9GZU7 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Homo sapiens OX=9606 GN=CTDSP1 PE=1 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37 Identity = 80/168 (47.62%), Postives = 111/168 (66.07%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy Swiss-Prot
Match: P58466 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus OX=10090 GN=Ctdsp1 PE=1 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37 Identity = 80/168 (47.62%), Postives = 111/168 (66.07%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy Swiss-Prot
Match: O15194 (CTD small phosphatase-like protein OS=Homo sapiens OX=9606 GN=CTDSPL PE=1 SV=2) HSP 1 Score: 157.9 bits (398), Expect = 1.6e-37 Identity = 84/183 (45.90%), Postives = 116/183 (63.39%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy TrEMBL
Match: A0A5A7UBM8 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002050 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy TrEMBL
Match: A0A5D3CPX7 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008430 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy TrEMBL
Match: E5GC25 (Carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy TrEMBL
Match: A0A1S3B010 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo OX=3656 GN=LOC103484427 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cmc08g0208811 vs. ExPASy TrEMBL
Match: A0A0A0KIC7 (FCP1 homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G520310 PE=4 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142 Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0
BLAST of Cmc08g0208811 vs. TAIR 10
Match: AT5G45700.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 238.4 bits (607), Expect = 6.7e-63 Identity = 135/278 (48.56%), Postives = 184/278 (66.19%), Query Frame = 0
BLAST of Cmc08g0208811 vs. TAIR 10
Match: AT1G29770.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 209.5 bits (532), Expect = 3.3e-54 Identity = 114/259 (44.02%), Postives = 159/259 (61.39%), Query Frame = 0
BLAST of Cmc08g0208811 vs. TAIR 10
Match: AT1G29780.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 206.8 bits (525), Expect = 2.2e-53 Identity = 102/172 (59.30%), Postives = 129/172 (75.00%), Query Frame = 0
BLAST of Cmc08g0208811 vs. TAIR 10
Match: AT5G11860.1 (SCP1-like small phosphatase 5 ) HSP 1 Score: 142.9 bits (359), Expect = 3.8e-34 Identity = 81/187 (43.32%), Postives = 118/187 (63.10%), Query Frame = 0
BLAST of Cmc08g0208811 vs. TAIR 10
Match: AT5G11860.2 (SCP1-like small phosphatase 5 ) HSP 1 Score: 142.9 bits (359), Expect = 3.8e-34 Identity = 81/187 (43.32%), Postives = 118/187 (63.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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