Cmc08g0208171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0208171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	la-related protein 6A
Location	CMiso1.1chr08: 1080621 .. 1085895 (+)
RNA-Seq Expression	Cmc08g0208171
Synteny	Cmc08g0208171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGGGTGTTGTCGGCTATTGATATAAAATGGTCCGCGGAACAACTCATCGAAGTTAGGAGAAACGGAGGGCGTGAAGGTACTTTAGGTTCTTACCGCCTAACGCTTTTCTCCTCCTCACCATGGCCGGCGATGAGCCTCCGACTACGTCCTCCACCGCCGCAGTCTCTTCCCCCGTCGCCGACTCCATCCTCTCGCCCCCACCTCAAGATCCCGTCGGATCACCCAGTCGCGATGTGCCGGAGATTCAATCATTGATATCCGAAGACGATCATGACCAGGGATCCAGGGAGAATCGCGATCAGGGTCACGAACCCGCGGTGAAAGCGGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTAACTCTTCCGCCTCTCCCCTCCCCACTCTCCATCGTCCATCCCATTGAACCTCAAATTTCTTTGCCTTTAGGTTTTGCCTGGTTTGCAATTTTTGGATTTGTGAATCAGTATGTAAATCCCTTTTTTTCATCTTGCATATGTAATTTAATTGCTACATGTGACTTTTTGTATATATACTTGCATCGCTGAGTGCAAATATAAGAACGTTAGGAAGTTTATGGTTAGACCATCAACTGCAAAGGGAGTTATGGGATCAATTGATCATTCCACGGGCGGGATATCATATATTTGATGCTTTGTTACGTCATTATTAGTATAGTCTTTTGATGTAAGACCTGAAGACAGCATTTAGATTTTGACAGTTGGATTTCAATTCATTCAGTTTTTTTTATGATTTTTTTGAGTGTTTCAGTATGCCGTCGTCGTCTCATGATTGGTCTAAATATCTTCGCAGGTGGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGGTATGTTACTTGGGTAATGTTCACTTTTATGGAGATTTATATCTTTCAGAGGAAATGAAAACTCCCAGTAGTATTGACCGTTATAAGGTTGAACAGGTATAATAACTTACAAAAGAATTTGGTGTCTTTGGTTTTTTTTTGTCAAATTTTGAACTACTATCTGGAAGAATTTCCTCCCGAGCCAAACATAAAACAATTGAAATTAAGAAAGATTTAATGTACCTTTAATTGCCTTTTCTACTGTATGACTTGTGGAAATTGAGAAGCTTTGATCGCTCTCATTTCACTGATACGATTTGCCTTAAAAATTCCAATATAGCTTCAGTAGACATTTTTAGTTTGTAGTCTAATTTGGTAGCGTCTTTTCTTCAAACATAGGAGTTGCTAAGAGTAATAATTTGGAAAAAGGATTCATTCTATGGAAATGCTTCAGGGAGTTATTTGTTAGGTCTTTTGCTGTGACTTCAATTCTTTAATCAATAAGCAAGGGTTTATTTTCAGATTTTAACTTTTAATCAATCAATTGTAGTATCAAACTCGAAACTAAAATTATTATTACAAAAGGAATGAAGCCTAACGGATGGCCTAGTTGTGAATGTGAATTCTTGGGTGTTCAATCATCTGAAACACCCTGTGATTACTTGACATATCTTGTTGATATGTTGATATAGAAGAGCTCAGGAGGTGGTCTTTCATGTTTTATTCATACTCGTATCTTTACTGTTTGCTCATTTCCCTTTTGTCTTTCTACTTCTCTCTCTCTTTTTTAATTGTCCGTAGATTCTGATTTTCTGTAATATCTTGTAGCAACCAATTCTGTTATCAATGCACCAATAATTTGAAATTCATTTTCTCTTTATTTTTCTAGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCGTTCATTTATCACTGCTGCACTGAGGGAATCCTCTGTTCTTGTAAGATACTTCATTCTTGTAAATATAGCAACCAATGCCTCTTTTTGCTTGATGCCACGAGCACATTTTAATTTACTTGCCAACCGCAGGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCCGAGACTAGGGATTCTAAGGTATTTGCTTGTGTACTTGTGAAATTAACAATTGTTGTGTAACTTGAACTTATGGTAATTCATTACATTTCTATGTGGAGTATAGTTATTTACTATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAAAGAATTTTTGGAGTGGCTGGACGGTATGCCATTCCTGATTCCAAAACTATGTTTTCATGAAAATATTTCTCCATTCACACTTCACTTGATGATTAATTTTTTTATTTTTTATTTTTTATTTTTTGTATTTTTAGTATAAGAAGCATCACCATTTGTGACCCACATGTGGTAGACAAGTTGGGGAAAAGCAACAAGAGTGATGTGCTGATCAGTAATAAGGTAAATCTTGTAACCAGCTGATAGGAATAAAAAATTCAGTTTCTGATTAAAGGGGACATTGTGGTGATGCTCGTGCTTCCCATTTCAGCTCTCGTAATGATTCTGATGATTGTCTCACATTAACCATTAAAGAGTGTTGTCTCAATTTGTTTTCTTTTTCCGAAATCATCATATGTAGACTTCCTTCGTAGCAGGACTGACATTTATGAAAAGGTAGTTAGGAAATTTTTATAAAAAATTGAAGAAACATTTCCTTTCACCAGACTGAAATTTTGTTGAAAGTAGCATGTTGGGTCCTGAAGATAAGGAGGGAAGACTAATACAACGTCAGTTTGATTGTGCAGGTGGAGAGAAAATTATAAGTGTGCATTGTTCAATACAGTATGTTGTATCCAATGTTTTAAGAGTGATGTATCCAATGTTTTTAATAACTATTGAGGCTTAAGTGTGGTTGGACTCTAACTTTTAGCCTCGAAACTTGCATCCTCCTGAAAACGCATTGAGACTTAAAATCTCCACACCCTGCCTAATATAGAGGTTTGATTAGAAAAACAATAGCGATTTGCCTTGTCCTTAAAAAATACAAGGGGCATTTCAGGCCTTCAGTTGGTTATTATGTTCTGTAGTTATTAATATTCTAAGGGTTATAATAATCTGTGTTTGAGATGTATACTATTTTAGTATGAGTTAATGAAGAGGAGACAGTATGTATGGGAAATAATAAACACCGTAATAAAGAGATTTGAAATTAATTGTGGGTTACAATAGTTGGAAACACCAACTTCCAACTATTATAATTTGAAGCCAAAACAGTTCATGGATGTAGTAGTGTCCACCCAATTGAAGTTGGGGACCCAAACAGCCCCATAGAGGTTTGAGTATGACAAGTTGAACTACTACTTCATTACCATGACTTTAAAATCATTCCAAACAATTTTATTGTATAAATGAATCCTCTTAATGATAATAGTAATGATGTTAAAGACATCATTTTAGAATCTTGTTTTAAGTAAAGATTGTGGGGCGACTTTTTTCTTTTCACTTTTATAATGACCATTATGTTTAGCAATACTTAATTATATCAATTTTAGATCTGCAAAATATTTTATATTAAATTTGTAGCTAACGCCTCTTACACCCTTGCCTCTTCTAACGGAAAAGGCCTCTCTTTAGCTATTGAAAACATTCATGCAGCTATGCTTTGTCTCAGATTTCTTGACGTGAATTGAGTTACATTAAAAGATCAAACGAACTATGTTTACTCATTCCGCCTTTTTTCTTGGTCACTGTAGTTGCATGCTCTAGTGGAGTATGAGACACTGGAGGCTTCGGAGAAAGCTGTGAGTAATCAGATATGTGCTCTATTTTCTTTAACTTGGTAATTATACCGTTTTTTATTTGATATCAATAATCGTTTTTCTGATTTTTCATTAGGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGGTACTGTATCTCATTTCACTTGCATTTTTTAAGTTGATTGTATTCTATTCACAATGTAGTTTTCAACTTCAGAGTAAACATGGCCAAAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAGCTGACCAGAATGGTCCTAACAAGAACATTCCTGTGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCCGAACGTTGTAAATGAGCATCATGACGGTGTGCCTGATGAGGAGGTTAATCTTGCTCTTGTGCTTTCTATTTCTGGGTGCTTCTTATTGGGCACACATTTTGATCAAAATTTGTTCTTGAGTTCCCGTCATGTGTTGGTTATTCTCTTCCAACTCCCCTTGCAAGAAAATGGTTGTTGTGATTGATAACAAATAACAATATCAACTTTGCCAAATTTAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCAAAATCAAGGACGAACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTACCTACTGATCTGATCACGTTATCTTAAATTTCATGTTAACGAATTTTATCTTGATAATCTTTTGCTTACTTTGTAGGTCATGGAACTACAACTTCTACCCATCACATTGAACTTTCAAAACCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAATGAGAATTTGCATCAAGTGGGTCTGTAGAAATTTAACTTTTTATGTTTTTTACTTTGATTGATGGGCATGCTAGAACGCGTCCTGGTATATGTCTAAGTAGCTTGGCCAAAATGTATCTAACCTTGAAAGATTTGTGTCTTGAGGAAATGTTATCTTGTATATTGTTCACTTGTATGCTATGTTTAAATTTGGTGGTTTTGAATTTTCCAACTGAGTCTAATTAAAAATCAAATTCCTTTATTTTTAAAAATATGAAAACTGTTTATTTATTAGTTCGATAGGAAGGGGAATTTGAAATAGTAATATCTTGGTAGAGTATACTGCACTGTATTCGTTTTGAGAAAAAATATGAAAAACGTATGCATTCTTATGGATTTTGTACAATACGCTCATCTTTCTTTTTCTTTTTCTGATGAAGCAGATTGTTGGGTAAGAAGAGTTGATAATATGTTTTTGTGGCCATGGGTGGTTTCAACTACCAAAAGAATATTTTTGGATGGAATCTCTGTTTGATTGTGATTTTTACAAAAGGAAAAAAGAATAAGTCCTTTGTTGTGATATGAGTTGTAAAGGCCACTTTGCTCCAACGTTTCCATCCAAAATTTAGAATTTTATGCGTTTTGTCTTCGACATCTCTAAATATTA

mRNA sequence

TGGAGGGTGTTGTCGGCTATTGATATAAAATGGTCCGCGGAACAACTCATCGAAGTTAGGAGAAACGGAGGGCGTGAAGGTACTTTAGGTTCTTACCGCCTAACGCTTTTCTCCTCCTCACCATGGCCGGCGATGAGCCTCCGACTACGTCCTCCACCGCCGCAGTCTCTTCCCCCGTCGCCGACTCCATCCTCTCGCCCCCACCTCAAGATCCCGTCGGATCACCCAGTCGCGATGTGCCGGAGATTCAATCATTGATATCCGAAGACGATCATGACCAGGGATCCAGGGAGAATCGCGATCAGGGTCACGAACCCGCGGTGAAAGCGGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTGGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCGTTCATTTATCACTGCTGCACTGAGGGAATCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCCGAGACTAGGGATTCTAAGTTATTTACTATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAAAGAATTTTTGGAGTGGCTGGACGTATAAGAAGCATCACCATTTGTGACCCACATGTGGTAGACAAGTTGGGGAAAAGCAACAAGAGTGATGTGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGAGACACTGGAGGCTTCGGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTAAACATGGCCAAAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAGCTGACCAGAATGGTCCTAACAAGAACATTCCTGTGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCCGAACGTTGTAAATGAGCATCATGACGGTGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCAAAATCAAGGACGAACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACCCATCACATTGAACTTTCAAAACCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAATGAGAATTTGCATCAAGTGGATTGTTGGGTAAGAAGAGTTGATAATATGTTTTTGTGGCCATGGGTGGTTTCAACTACCAAAAGAATATTTTTGGATGGAATCTCTGTTTGATTGTGATTTTTACAAAAGGAAAAAAGAATAAGTCCTTTGTTGTGATATGAGTTGTAAAGGCCACTTTGCTCCAACGTTTCCATCCAAAATTTAGAATTTTATGCGTTTTGTCTTCGACATCTCTAAATATTA

Coding sequence (CDS)

ATGGCCGGCGATGAGCCTCCGACTACGTCCTCCACCGCCGCAGTCTCTTCCCCCGTCGCCGACTCCATCCTCTCGCCCCCACCTCAAGATCCCGTCGGATCACCCAGTCGCGATGTGCCGGAGATTCAATCATTGATATCCGAAGACGATCATGACCAGGGATCCAGGGAGAATCGCGATCAGGGTCACGAACCCGCGGTGAAAGCGGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTGGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCGTTCATTTATCACTGCTGCACTGAGGGAATCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCCGAGACTAGGGATTCTAAGTTATTTACTATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAAAGAATTTTTGGAGTGGCTGGACGTATAAGAAGCATCACCATTTGTGACCCACATGTGGTAGACAAGTTGGGGAAAAGCAACAAGAGTGATGTGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGAGACACTGGAGGCTTCGGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTAAACATGGCCAAAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAGCTGACCAGAATGGTCCTAACAAGAACATTCCTGTGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCCGAACGTTGTAAATGAGCATCATGACGGTGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCAAAATCAAGGACGAACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACCCATCACATTGAACTTTCAAAACCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAA

Protein sequence

MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRDQGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

Homology

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BLAST of Cmc08g0208171 vs. NCBI nr
Match: XP_008439642.1 (PREDICTED: la-related protein 6A [Cucumis melo])

HSP 1 Score: 774.2 bits (1998), Expect = 5.2e-220
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394

[Close]

BLAST of Cmc08g0208171 vs. NCBI nr
Match: TYK13277.1 (la-related protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 756.9 bits (1953), Expect = 8.6e-215
Identity = 387/394 (98.22%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLIS+DDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPA KAAVLPEDLKQRI   VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRI---VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNK DVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGP+KNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 391

[Close]

BLAST of Cmc08g0208171 vs. NCBI nr
Match: KAA0052548.1 (la-related protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 743.4 bits (1918), Expect = 9.9e-211
Identity = 387/418 (92.58%), Postives = 389/418 (93.06%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLIS+DDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPA KAAVLPEDLKQRI   VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRI---VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNK DVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDK 300
           LNDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDK
Sbjct: 241 LNDEQDWRNGMRVKPLKHMVLYLISLAFFKLIVFYSQCSFQLQSKHGQRKQHWRGPEPDK 300

Query: 301 NSSGRIADQNGPNKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360
           NSSGRIADQNGP+KNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN
Sbjct: 301 NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360

Query: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 415

[Close]

BLAST of Cmc08g0208171 vs. NCBI nr
Match: XP_004134576.1 (la-related protein 6A [Cucumis sativus] >KGN49390.1 hypothetical protein Csa_002950 [Cucumis sativus])

HSP 1 Score: 713.8 bits (1841), Expect = 8.4e-202
Identity = 367/395 (92.91%), Postives = 377/395 (95.44%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSIL-SPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENR 60
           M+GDEPPTTSS       VADSIL SPPPQDPVGSPS DVP+IQ LISEDDHDQGSRE+ 
Sbjct: 1   MSGDEPPTTSS-------VADSILSSPPPQDPVGSPSLDVPDIQPLISEDDHDQGSRESH 60

Query: 61  DQGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 120
           DQGHEPAV+AAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGL+KKNKEGYVPIAIIASF
Sbjct: 61  DQGHEPAVRAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASF 120

Query: 121 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 180
           KRM+KLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDH
Sbjct: 121 KRMRKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDH 180

Query: 181 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVA 240
           SEEN+KRIFGVAGRIRSITICDPHVVDKLGKS+K DVLISNKLHALVEYETLEASEKAVA
Sbjct: 181 SEENMKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVA 240

Query: 241 TLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQ 300
           TLNDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRIADQNGP+KNIP RVTDQ
Sbjct: 241 TLNDEQDWRNGMRVKPLKLMSKHGQRKQHWRGPEPDKTSSGRIADQNGPDKNIPGRVTDQ 300

Query: 301 NGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360
           NG+EEIPNVVNEHHD VPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST
Sbjct: 301 NGNEEIPNVVNEHHDDVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360

Query: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HHIELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Sbjct: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSTQSI 388

[Close]

BLAST of Cmc08g0208171 vs. NCBI nr
Match: XP_038882123.1 (la-related protein 6A [Benincasa hispida])

HSP 1 Score: 700.3 bits (1806), Expect = 9.6e-198
Identity = 356/392 (90.82%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPPTTSS AAVSS VA+SILSPPP+DPVGSPSRDVPE QSLISEDDHDQG RE+ D
Sbjct: 1   MAGDEPPTTSSNAAVSSSVAESILSPPPRDPVGSPSRDVPETQSLISEDDHDQGPRESHD 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
            GHEPAVK AVLPEDLKQRIVKQVEYYFSDENLP+DK+LLGLIKKNKEG+VPIAIIA+FK
Sbjct: 61  HGHEPAVKPAVLPEDLKQRIVKQVEYYFSDENLPTDKHLLGLIKKNKEGFVPIAIIAAFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLT D SFITAALRESSVLV+SSNGKKVKRLHPI LPETRD KLFTILVENLPEDHS
Sbjct: 121 RMKKLTQDHSFITAALRESSVLVISSNGKKVKRLHPIPLPETRDPKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFG AGRIRSITICDPHVV+KLGKS+K DVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGAAGRIRSITICDPHVVEKLGKSSKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKH+SKHGQRKQHWRGP+PDKNS+GRI DQ+GP+KNIP R TDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHLSKHGQRKQHWRGPDPDKNSTGRITDQSGPDKNIPGRTTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEI N VNEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTS H
Sbjct: 301 GDEEIHN-VNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSAH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ 393
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ 391

[Close]

BLAST of Cmc08g0208171 vs. ExPASy Swiss-Prot
Match: Q94A38 (La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-90
Identity = 200/400 (50.00%), Postives = 273/400 (68.25%), Query Frame = 0


Query: 9   TSSTAAVSSPV--ADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRDQGH-EP 68
           T+  +   SP+   DS       D V     ++P +     + DH++ S E+RDQ H E 
Sbjct: 30  TADFSQPQSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDHGEN 89

Query: 69  AVK--AAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRM 128
            V+    V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F +M
Sbjct: 90  PVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKM 149

Query: 129 KKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEE 188
           KKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDHS E
Sbjct: 150 KKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSNE 209

Query: 189 NIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLN 248
           NI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA ATLN
Sbjct: 210 NIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLN 269

Query: 249 DEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNG 308
           +EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G  KN   R      
Sbjct: 270 NEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR------ 329

Query: 309 DEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 368
             E  N    H D   D++ G+HQ KDK+G++G+  G+ RRQ ++G NG+GHGT +S+ H
Sbjct: 330 --EHQNHRLHHSDNPADDDGGNHQ-KDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSH 389

Query: 369 -----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS 394
                +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Sbjct: 390 PNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418

[Close]

BLAST of Cmc08g0208171 vs. ExPASy Swiss-Prot
Match: Q9LHL3 (La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-43
Identity = 124/333 (37.24%), Postives = 183/333 (54.95%), Query Frame = 0


Query: 71  VLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRS 130
           +L +DL+ +IVKQVEY F+D +L +++ +   I K+ EGYVP++ IAS K++K LT +  
Sbjct: 139 LLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHH 198

Query: 131 FITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGV 190
            ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS +N+++IFGV
Sbjct: 199 LVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGV 258

Query: 191 AGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLNDEQDWRNG 250
            G +++I IC  H  +      K D L+SNK+HAL+EY+    ++KAV  LNDE++WR G
Sbjct: 259 VGNVKAIRIC--HPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKLNDERNWRKG 318

Query: 251 MRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNGDEEIPNVVN 310
           +RV+ L   S     K         +N  G + D   P+             E+ P +  
Sbjct: 319 LRVRLLLRCSPKSVLKNR-------RNFDGILIDDELPS---------YESGEDSPRL-- 378

Query: 311 EHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGH----------GTTTSTH 370
            H      + +GD  +      +G+ +GR R  +   V G G           G  +   
Sbjct: 379 -HLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGS 438

Query: 371 HIELSKP---PPGPKMPDGTRGFTMGRGRPPTS 391
           H E S P     GP+MPDGTRGFTMGRG+P  S
Sbjct: 439 H-ESSSPKTATKGPRMPDGTRGFTMGRGKPSIS 449

[Close]

BLAST of Cmc08g0208171 vs. ExPASy Swiss-Prot
Match: O80567 (La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-42
Identity = 132/384 (34.38%), Postives = 201/384 (52.34%), Query Frame = 0


Query: 49  DDHDQGSRENR-DQGHEPAVKAAV-----LPEDLKQRIVKQVEYYFSDENLPSDKYLLGL 108
           D  D   RE++ DQ  E     ++     LPED  Q+IV QVEYYFSD NL +  +L+  
Sbjct: 160 DRRDHSKRESKNDQVTETGASVSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRF 219

Query: 109 IKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPET 168
           I K+ EGYVPI ++ASFK++K + ++ S + A L+ S+ L VS +GKKV+R+ PI+    
Sbjct: 220 ICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAI 279

Query: 169 RDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKSNKSD-V 228
            + +   I+ ENLPEDH  +N+ +IF   G +++I  C P             + KSD  
Sbjct: 280 EELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGT 339

Query: 229 LISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPD 288
           L SNK+HA VEYE +E +E+AV  L++  +WR+G++V+  LKH +K  ++ Q  RG +  
Sbjct: 340 LFSNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQ-GRGRKGH 399

Query: 289 KNSSGRIADQNGPNKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQ--HKDKHGHR 348
                   D    ++  P+     +   E    + E   G   E++G+ +   + K  +R
Sbjct: 400 DADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHMQEQPIG---EDQGNEKAAGQRKGRNR 459

Query: 349 GQNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL----------------- 388
           G+ +GR R Q ++              N  G G     HH ++                 
Sbjct: 460 GRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGM 519

[Close]

BLAST of Cmc08g0208171 vs. ExPASy Swiss-Prot
Match: Q05CL8 (La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 5.8e-20
Identity = 62/164 (37.80%), Postives = 95/164 (57.93%), Query Frame = 0


Query: 80  IVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRES 139
           I KQV+++F D NL  DK+L   I+K+++GYV I+++ SF +MKKLT D   I  AL+ S
Sbjct: 32  IAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSS 91

Query: 140 SVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITI 199
           SV+ +   G +++R  P+     +D +  T+ VE LP++ +   I+R+FG  G +  I+I
Sbjct: 92  SVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI 151

Query: 200 CDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLND 244
             PH      KS         K  A VE+ET E + KA+  LN+
Sbjct: 152 --PHY-----KSTGDP-----KGFAFVEFETKEQAAKAIEFLNN 182

[Close]

BLAST of Cmc08g0208171 vs. ExPASy Swiss-Prot
Match: Q4G0J3 (La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-19
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 80  IVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRES 139
           I KQV+++F D NL  D++L   I+K+++GYV I+++ SF +MKKLT D   I  ALR S
Sbjct: 38  IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97

Query: 140 SVLVVSSNGKKVKRLHPI-SLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSIT 199
           +V+ +   G +++R  P+   P+  D +  T+ VE LP++ +   I+R+FG  G +  I+
Sbjct: 98  AVVELDLEGTRIRRKKPLGERPKDEDER--TVYVELLPKNVNHSWIERVFGKCGNVVYIS 157

Query: 200 ICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLND 244
           I  PH      KS         K  A VE+ET E + KA+  LN+
Sbjct: 158 I--PHY-----KSTGDP-----KGFAFVEFETKEQAAKAIEFLNN 188

[Close]

BLAST of Cmc08g0208171 vs. ExPASy TrEMBL
Match: A0A1S3AYU2 (la-related protein 6A OS=Cucumis melo OX=3656 GN=LOC103484374 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.5e-220
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394

[Close]

BLAST of Cmc08g0208171 vs. ExPASy TrEMBL
Match: A0A5D3CMV4 (La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008960 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.2e-215
Identity = 387/394 (98.22%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLIS+DDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPA KAAVLPEDLKQRI   VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRI---VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNK DVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGP+KNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 391

[Close]

BLAST of Cmc08g0208171 vs. ExPASy TrEMBL
Match: A0A5A7UBI5 (La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001510 PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.8e-211
Identity = 387/418 (92.58%), Postives = 389/418 (93.06%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLIS+DDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPA KAAVLPEDLKQRI   VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRI---VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNK DVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDK 300
           LNDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDK
Sbjct: 241 LNDEQDWRNGMRVKPLKHMVLYLISLAFFKLIVFYSQCSFQLQSKHGQRKQHWRGPEPDK 300

Query: 301 NSSGRIADQNGPNKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360
           NSSGRIADQNGP+KNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN
Sbjct: 301 NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360

Query: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 415

[Close]

BLAST of Cmc08g0208171 vs. ExPASy TrEMBL
Match: A0A0A0KI36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523320 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.1e-202
Identity = 367/395 (92.91%), Postives = 377/395 (95.44%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSIL-SPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENR 60
           M+GDEPPTTSS       VADSIL SPPPQDPVGSPS DVP+IQ LISEDDHDQGSRE+ 
Sbjct: 1   MSGDEPPTTSS-------VADSILSSPPPQDPVGSPSLDVPDIQPLISEDDHDQGSRESH 60

Query: 61  DQGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 120
           DQGHEPAV+AAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGL+KKNKEGYVPIAIIASF
Sbjct: 61  DQGHEPAVRAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASF 120

Query: 121 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 180
           KRM+KLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDH
Sbjct: 121 KRMRKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDH 180

Query: 181 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVA 240
           SEEN+KRIFGVAGRIRSITICDPHVVDKLGKS+K DVLISNKLHALVEYETLEASEKAVA
Sbjct: 181 SEENMKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVA 240

Query: 241 TLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQ 300
           TLNDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRIADQNGP+KNIP RVTDQ
Sbjct: 241 TLNDEQDWRNGMRVKPLKLMSKHGQRKQHWRGPEPDKTSSGRIADQNGPDKNIPGRVTDQ 300

Query: 301 NGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360
           NG+EEIPNVVNEHHD VPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST
Sbjct: 301 NGNEEIPNVVNEHHDDVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360

Query: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HHIELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Sbjct: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSTQSI 388

[Close]

BLAST of Cmc08g0208171 vs. ExPASy TrEMBL
Match: A0A6J1IUP2 (la-related protein 6A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111478735 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 2.3e-173
Identity = 320/391 (81.84%), Postives = 350/391 (89.51%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60
           MAGDEPP +S    +SS V++SI SPP QDPVGSPSRDVPEIQSL SEDDHDQG RE+  
Sbjct: 1   MAGDEPPISSYPDVISSSVSESIPSPPRQDPVGSPSRDVPEIQSLASEDDHDQGLREH-- 60

Query: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
             H+ AVKAAVL EDLK+RI+KQVEYYFSDENLP+DK+LLGLIKKNK+G+VPIAIIA+FK
Sbjct: 61  --HDHAVKAAVLSEDLKRRIIKQVEYYFSDENLPTDKHLLGLIKKNKDGFVPIAIIAAFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLT D +FITAALRESSVLVVSSNGKKVKRLHPI LPETRD K+FTILVENLPEDHS
Sbjct: 121 RMKKLTQDHTFITAALRESSVLVVSSNGKKVKRLHPIPLPETRDPKVFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAG IRSIT+ DPH+VDK+GKS+K DVLISNKLHALVEYE+LEA EKAVAT
Sbjct: 181 EENIKRIFGVAGHIRSITVYDPHMVDKMGKSSKGDVLISNKLHALVEYESLEACEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300
           LNDE DWRNGMRVKPLKH+SKHGQRKQHWRGP+PDKN + R ADQNGP+KN   R+TDQN
Sbjct: 241 LNDEHDWRNGMRVKPLKHLSKHGQRKQHWRGPDPDKNFTWRTADQNGPDKNSSGRITDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEI N + EHHD VPDEEE D+QHKDKHG+RG+NQGRTRRQKYK VNG GHG TTS H
Sbjct: 301 GDEEIQN-ITEHHDDVPDEEEVDYQHKDKHGNRGRNQGRTRRQKYKSVNGTGHGITTSAH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSN 392
           HIELSKPPPGPKMPDGTRGFTMGRGRP TS+
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPLTSS 386

[Close]

BLAST of Cmc08g0208171 vs. TAIR 10
Match: AT5G46250.1 (RNA-binding protein )

HSP 1 Score: 335.1 bits (858), Expect = 7.6e-92
Identity = 200/400 (50.00%), Postives = 273/400 (68.25%), Query Frame = 0


Query: 9   TSSTAAVSSPV--ADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRDQGH-EP 68
           T+  +   SP+   DS       D V     ++P +     + DH++ S E+RDQ H E 
Sbjct: 30  TADFSQPQSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDHGEN 89

Query: 69  AVK--AAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRM 128
            V+    V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F +M
Sbjct: 90  PVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKM 149

Query: 129 KKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEE 188
           KKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDHS E
Sbjct: 150 KKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSNE 209

Query: 189 NIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLN 248
           NI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA ATLN
Sbjct: 210 NIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLN 269

Query: 249 DEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNG 308
           +EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G  KN   R      
Sbjct: 270 NEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR------ 329

Query: 309 DEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHH 368
             E  N    H D   D++ G+HQ KDK+G++G+  G+ RRQ ++G NG+GHGT +S+ H
Sbjct: 330 --EHQNHRLHHSDNPADDDGGNHQ-KDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSH 389

Query: 369 -----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS 394
                +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Sbjct: 390 PNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418

[Close]

BLAST of Cmc08g0208171 vs. TAIR 10
Match: AT5G46250.2 (RNA-binding protein )

HSP 1 Score: 258.5 bits (659), Expect = 9.0e-69
Identity = 155/321 (48.29%), Postives = 212/321 (66.04%), Query Frame = 0


Query: 9   TSSTAAVSSPV--ADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRDQGH-EP 68
           T+  +   SP+   DS       D V     ++P +     + DH++ S E+RDQ H E 
Sbjct: 30  TADFSQPQSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDHGEN 89

Query: 69  AVK--AAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRM 128
            V+    V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F +M
Sbjct: 90  PVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKM 149

Query: 129 KKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEE 188
           KKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDHS E
Sbjct: 150 KKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSNE 209

Query: 189 NIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLN 248
           NI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA ATLN
Sbjct: 210 NIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLN 269

Query: 249 DEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNG 308
           +EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G  KN   R      
Sbjct: 270 NEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR------ 329

Query: 309 DEEIPNVVNEHHDGVPDEEEG 323
             E  N    H D   D+ +G
Sbjct: 330 --EHQNHRLHHSDNPADDVKG 340

[Close]

BLAST of Cmc08g0208171 vs. TAIR 10
Match: AT5G46250.3 (RNA-binding protein )

HSP 1 Score: 258.5 bits (659), Expect = 9.0e-69
Identity = 155/321 (48.29%), Postives = 212/321 (66.04%), Query Frame = 0


Query: 9   TSSTAAVSSPV--ADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRDQGH-EP 68
           T+  +   SP+   DS       D V     ++P +     + DH++ S E+RDQ H E 
Sbjct: 30  TADFSQPQSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDHGEN 89

Query: 69  AVK--AAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRM 128
            V+    V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F +M
Sbjct: 90  PVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKM 149

Query: 129 KKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEE 188
           KKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDHS E
Sbjct: 150 KKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDHSNE 209

Query: 189 NIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLN 248
           NI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKAV TLN
Sbjct: 210 NIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAVTTLN 269

Query: 249 DEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNG 308
           +EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G  KN   R      
Sbjct: 270 NEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR------ 329

Query: 309 DEEIPNVVNEHHDGVPDEEEG 323
             E  N    H D   D+ +G
Sbjct: 330 --EHQNHRLHHSDNPADDVKG 340

[Close]

BLAST of Cmc08g0208171 vs. TAIR 10
Match: AT3G19090.1 (RNA-binding protein )

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-44
Identity = 124/333 (37.24%), Postives = 183/333 (54.95%), Query Frame = 0


Query: 71  VLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRS 130
           +L +DL+ +IVKQVEY F+D +L +++ +   I K+ EGYVP++ IAS K++K LT +  
Sbjct: 139 LLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHH 198

Query: 131 FITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGV 190
            ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS +N+++IFGV
Sbjct: 199 LVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGV 258

Query: 191 AGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVATLNDEQDWRNG 250
            G +++I IC  H  +      K D L+SNK+HAL+EY+    ++KAV  LNDE++WR G
Sbjct: 259 VGNVKAIRIC--HPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKLNDERNWRKG 318

Query: 251 MRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQNGDEEIPNVVN 310
           +RV+ L   S     K         +N  G + D   P+             E+ P +  
Sbjct: 319 LRVRLLLRCSPKSVLKNR-------RNFDGILIDDELPS---------YESGEDSPRL-- 378

Query: 311 EHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGH----------GTTTSTH 370
            H      + +GD  +      +G+ +GR R  +   V G G           G  +   
Sbjct: 379 -HLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGS 438

Query: 371 HIELSKP---PPGPKMPDGTRGFTMGRGRPPTS 391
           H E S P     GP+MPDGTRGFTMGRG+P  S
Sbjct: 439 H-ESSSPKTATKGPRMPDGTRGFTMGRGKPSIS 449

[Close]

BLAST of Cmc08g0208171 vs. TAIR 10
Match: AT2G43970.1 (RNA-binding protein )

HSP 1 Score: 175.6 bits (444), Expect = 7.7e-44
Identity = 132/384 (34.38%), Postives = 201/384 (52.34%), Query Frame = 0


Query: 49  DDHDQGSRENR-DQGHEPAVKAAV-----LPEDLKQRIVKQVEYYFSDENLPSDKYLLGL 108
           D  D   RE++ DQ  E     ++     LPED  Q+IV QVEYYFSD NL +  +L+  
Sbjct: 160 DRRDHSKRESKNDQVTETGASVSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRF 219

Query: 109 IKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPET 168
           I K+ EGYVPI ++ASFK++K + ++ S + A L+ S+ L VS +GKKV+R+ PI+    
Sbjct: 220 ICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAI 279

Query: 169 RDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKSNKSD-V 228
            + +   I+ ENLPEDH  +N+ +IF   G +++I  C P             + KSD  
Sbjct: 280 EELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGT 339

Query: 229 LISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPD 288
           L SNK+HA VEYE +E +E+AV  L++  +WR+G++V+  LKH +K  ++ Q  RG +  
Sbjct: 340 LFSNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQ-GRGRKGH 399

Query: 289 KNSSGRIADQNGPNKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQ--HKDKHGHR 348
                   D    ++  P+     +   E    + E   G   E++G+ +   + K  +R
Sbjct: 400 DADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHMQEQPIG---EDQGNEKAAGQRKGRNR 459

Query: 349 GQNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL----------------- 388
           G+ +GR R Q ++              N  G G     HH ++                 
Sbjct: 460 GRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGM 519

The following BLAST results are available for this feature:

BLAST of Cmc08g0208171 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439642.1	5.2e-220	100.00	PREDICTED: la-related protein 6A [Cucumis melo]	[more]
TYK13277.1	8.6e-215	98.22	la-related protein 6A [Cucumis melo var. makuwa]	[more]
KAA0052548.1	9.9e-211	92.58	la-related protein 6A [Cucumis melo var. makuwa]	[more]
XP_004134576.1	8.4e-202	92.91	la-related protein 6A [Cucumis sativus] >KGN49390.1 hypothetical protein Csa_002...	[more]
XP_038882123.1	9.6e-198	90.82	la-related protein 6A [Benincasa hispida]	[more]

BLAST of Cmc08g0208171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A38	1.1e-90	50.00	La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1	[more]
Q9LHL3	4.8e-43	37.24	La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1	[more]
O80567	1.1e-42	34.38	La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2	[more]
Q05CL8	5.8e-20	37.80	La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2	[more]
Q4G0J3	1.7e-19	37.58	La-related protein 7 OS=Homo sapiens OX=9606 GN=LARP7 PE=1 SV=1	[more]

BLAST of Cmc08g0208171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AYU2	2.5e-220	100.00	la-related protein 6A OS=Cucumis melo OX=3656 GN=LOC103484374 PE=4 SV=1	[more]
A0A5D3CMV4	4.2e-215	98.22	La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25...	[more]
A0A5A7UBI5	4.8e-211	92.58	La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold12...	[more]
A0A0A0KI36	4.1e-202	92.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523320 PE=4 SV=1	[more]
A0A6J1IUP2	2.3e-173	81.84	la-related protein 6A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11147873...	[more]

BLAST of Cmc08g0208171 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46250.1	7.6e-92	50.00	RNA-binding protein	[more]
AT5G46250.2	9.0e-69	48.29	RNA-binding protein	[more]
AT5G46250.3	9.0e-69	48.29	RNA-binding protein	[more]
AT3G19090.1	3.4e-44	37.24	RNA-binding protein	[more]
AT2G43970.1	7.7e-44	34.38	RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 140..153 score: 27.92 coord: 83..100 score: 65.15 coord: 109..124 score: 42.05
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 169..254 e-value: 0.0043 score: 26.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 170..243 e-value: 1.1E-6 score: 28.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 168..254 score: 9.865582
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 74..154 e-value: 3.4E-41 score: 152.9
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 80..138 e-value: 6.2E-26 score: 90.2
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 70..161 score: 28.27177
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 161..266 e-value: 1.9E-10 score: 42.8
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 65..160 e-value: 1.1E-31 score: 110.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 5..389
None	No IPR available	PANTHER	PTHR22792:SF102	LA-RELATED PROTEIN 6A	coord: 5..389
None	No IPR available	CDD	cd08033	LARP_6	coord: 77..153 e-value: 6.78236E-36 score: 124.317
IPR034878	Plant La-related protein, RNA recognition motif	CDD	cd12288	RRM_La_like_plant	coord: 168..256 e-value: 5.16331E-38 score: 130.33
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 155..283
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 71..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0208171.1	Cmc08g0208171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005844	polysome
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding