Cmc08g0206641 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0206641
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr08: 129543 .. 130859 (+)
RNA-Seq Expression	Cmc08g0206641
Synteny	Cmc08g0206641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGTGAGCTATTTTGGAAAGGTATGAAAGAAGACATCAAGAAGTATGTGGAACAGTGTGAAATCTGCCAAAGAAATAAGAGTGAAGCAACCAAACCGGCAGGGGTTCTACAACCATTACCCATACCCGACCGCATATTGGAAGATTGGACTATGGACTTCATCGAAGGATTGCCTAAAGCAGGAGGTATGAACGTGATTATGGTGGTTGTCGACCGGCTGAGTAAATATGCTTATTTTGTCACCATGAAGCATCCGTTTTCAGCAAAGCAAGTTGCCATGGAATTCATTGATAAGATAGTTCGAAGACACGGCATCCCTAAGTCAATTATATCAGATAGGGACAAAATATTTGTAAGCAACTTTTGGAAAGAACTATTTTATGCCATGAATACCATCCTTAAACGAAGCACTGCCTTTCATCCTCAAACGGATGGCCAAACAGAACGAGTCAATCAATGTTTAGAAACCTACTTACGGTGCTTTTGTAATGAGCAACCAAACAAATGGCATCAGTTCATTCCATGGGCAGAGTTATGGTACAACACCACATTCCATTCGTCAACACGCACAACTCCTTTTCAGACTGTGTATGGTAGACCCCCACCACCCCTGATATCCTATGGAGACAAGAAGACACCTAATAATGAAGTTGAAGCATTGCTGAAGGAAAGAGATTTGGCTATTAGTGCGCTCAAGGAGAACCTCACGATCGCTCAAAATAGAATGAAGAAATTTGCGGACTCAAAGAGAAGAGAACTTAAGTTTAAAGTAGGAGATGAAGTCTATCTAAAGTTAAGACCCTACCGGCAGCGCTCCTTAGCAAGAAAAAGGGCAGAAAAGCTAGCTCCTAAATATTATGGCCCATATCGCATCATTGAAACTATAGGAGAAGTGGCATACCGACTTGATTTACCACCCGAAGCATCAATTCATAATGTTTTCCACATATCACAGCTCAAACTGAAACTAGGCAACCAACACAACGTCCAAATCCAACAACCACAGCTCACAGCAGAGTTCGAATTACAACTTTGGCCGGAGACAGTTTTAGGCATACGTTGGAGTCCTGAATTGGGAGCCAATGAATGGCTGGTGAAATGGAAAGGACTGCCAGACAGTGAAGCCACCTGGGAATCAGTTTACTCAATGAATCAACAGTTTCCTTCATTCCACCTTGAGGACAAGGTGATTTTGGAACCCCGGGGTATTGTAAGACCTCCTATTATTAATGTGTATAAGAGGAGGGGTAAGAAAGGAAAGTTACAGGACAGCAAGGAGGAAAGAGAGAATGGAAATGAAATAGTGGATTAG

mRNA sequence

ATGAGTGGTGAGCTATTTTGGAAAGGTATGAAAGAAGACATCAAGAAGTATGTGGAACAGTGTGAAATCTGCCAAAGAAATAAGAGTGAAGCAACCAAACCGGCAGGGGTTCTACAACCATTACCCATACCCGACCGCATATTGGAAGATTGGACTATGGACTTCATCGAAGGATTGCCTAAAGCAGGAGGTATGAACGTGATTATGGTGGTTGTCGACCGGCTGAGTAAATATGCTTATTTTGTCACCATGAAGCATCCGTTTTCAGCAAAGCAAGTTGCCATGGAATTCATTGATAAGATAGTTCGAAGACACGGCATCCCTAAGTCAATTATATCAGATAGGGACAAAATATTTGTAAGCAACTTTTGGAAAGAACTATTTTATGCCATGAATACCATCCTTAAACGAAGCACTGCCTTTCATCCTCAAACGGATGGCCAAACAGAACGAGTCAATCAATGTTTAGAAACCTACTTACGGTGCTTTTGTAATGAGCAACCAAACAAATGGCATCAGTTCATTCCATGGGCAGAGTTATGGTACAACACCACATTCCATTCGTCAACACGCACAACTCCTTTTCAGACTGTGTATGGTAGACCCCCACCACCCCTGATATCCTATGGAGACAAGAAGACACCTAATAATGAAGTTGAAGCATTGCTGAAGGAAAGAGATTTGGCTATTAGTGCGCTCAAGGAGAACCTCACGATCGCTCAAAATAGAATGAAGAAATTTGCGGACTCAAAGAGAAGAGAACTTAAGTTTAAAGTAGGAGATGAAGTCTATCTAAAGTTAAGACCCTACCGGCAGCGCTCCTTAGCAAGAAAAAGGGCAGAAAAGCTAGCTCCTAAATATTATGGCCCATATCGCATCATTGAAACTATAGGAGAAGTGGCATACCGACTTGATTTACCACCCGAAGCATCAATTCATAATGTTTTCCACATATCACAGCTCAAACTGAAACTAGGCAACCAACACAACGTCCAAATCCAACAACCACAGCTCACAGCAGAGTTCGAATTACAACTTTGGCCGGAGACAGTTTTAGGCATACGTTGGAGTCCTGAATTGGGAGCCAATGAATGGCTGGTGAAATGGAAAGGACTGCCAGACAGTGAAGCCACCTGGGAATCAGTTTACTCAATGAATCAACAGTTTCCTTCATTCCACCTTGAGGACAAGGTGATTTTGGAACCCCGGGGTATTGTAAGACCTCCTATTATTAATGTGTATAAGAGGAGGGGTAAGAAAGGAAAGTTACAGGACAGCAAGGAGGAAAGAGAGAATGGAAATGAAATAGTGGATTAG

Coding sequence (CDS)

ATGAGTGGTGAGCTATTTTGGAAAGGTATGAAAGAAGACATCAAGAAGTATGTGGAACAGTGTGAAATCTGCCAAAGAAATAAGAGTGAAGCAACCAAACCGGCAGGGGTTCTACAACCATTACCCATACCCGACCGCATATTGGAAGATTGGACTATGGACTTCATCGAAGGATTGCCTAAAGCAGGAGGTATGAACGTGATTATGGTGGTTGTCGACCGGCTGAGTAAATATGCTTATTTTGTCACCATGAAGCATCCGTTTTCAGCAAAGCAAGTTGCCATGGAATTCATTGATAAGATAGTTCGAAGACACGGCATCCCTAAGTCAATTATATCAGATAGGGACAAAATATTTGTAAGCAACTTTTGGAAAGAACTATTTTATGCCATGAATACCATCCTTAAACGAAGCACTGCCTTTCATCCTCAAACGGATGGCCAAACAGAACGAGTCAATCAATGTTTAGAAACCTACTTACGGTGCTTTTGTAATGAGCAACCAAACAAATGGCATCAGTTCATTCCATGGGCAGAGTTATGGTACAACACCACATTCCATTCGTCAACACGCACAACTCCTTTTCAGACTGTGTATGGTAGACCCCCACCACCCCTGATATCCTATGGAGACAAGAAGACACCTAATAATGAAGTTGAAGCATTGCTGAAGGAAAGAGATTTGGCTATTAGTGCGCTCAAGGAGAACCTCACGATCGCTCAAAATAGAATGAAGAAATTTGCGGACTCAAAGAGAAGAGAACTTAAGTTTAAAGTAGGAGATGAAGTCTATCTAAAGTTAAGACCCTACCGGCAGCGCTCCTTAGCAAGAAAAAGGGCAGAAAAGCTAGCTCCTAAATATTATGGCCCATATCGCATCATTGAAACTATAGGAGAAGTGGCATACCGACTTGATTTACCACCCGAAGCATCAATTCATAATGTTTTCCACATATCACAGCTCAAACTGAAACTAGGCAACCAACACAACGTCCAAATCCAACAACCACAGCTCACAGCAGAGTTCGAATTACAACTTTGGCCGGAGACAGTTTTAGGCATACGTTGGAGTCCTGAATTGGGAGCCAATGAATGGCTGGTGAAATGGAAAGGACTGCCAGACAGTGAAGCCACCTGGGAATCAGTTTACTCAATGAATCAACAGTTTCCTTCATTCCACCTTGAGGACAAGGTGATTTTGGAACCCCGGGGTATTGTAAGACCTCCTATTATTAATGTGTATAAGAGGAGGGGTAAGAAAGGAAAGTTACAGGACAGCAAGGAGGAAAGAGAGAATGGAAATGAAATAGTGGATTAG

Protein sequence

MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEVAYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKKGKLQDSKEERENGNEIVD

Homology

[Close]

BLAST of Cmc08g0206641 vs. NCBI nr
Match: TYK15071.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 901.7 bits (2329), Expect = 2.4e-258
Identity = 437/438 (99.77%), Postives = 438/438 (100.00%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKLQDSKEERENGNEIVD
Sbjct: 1519 GKLQDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. NCBI nr
Match: TYK21035.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 897.9 bits (2319), Expect = 3.5e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKL DSKEERENGNEIVD
Sbjct: 1519 GKLHDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. NCBI nr
Match: TYK27058.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 897.9 bits (2319), Expect = 3.5e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKL DSKEERENGNEIVD
Sbjct: 1519 GKLHDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. NCBI nr
Match: TYK27963.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 897.9 bits (2319), Expect = 3.5e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKL DSKEERENGNEIVD
Sbjct: 1519 GKLHDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. NCBI nr
Match: TYJ96663.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 897.5 bits (2318), Expect = 4.6e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKV LEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVSLEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKLQDSKEERENGNEIVD
Sbjct: 1519 GKLQDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-56
Identity = 124/323 (38.39%), Postives = 178/323 (55.11%), Query Frame = 0


Query: 7    WKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMN 66
            WKG+++ I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI  LP++ G N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   VIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKE 126
             + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTF 186
              +  N ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HSSTRTTPFQTVY----GRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIAQN 246
            HS+T+ TPF+ V+       P  L S+ DK   N++      E       +KE+L     
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTVKEHLNTNNI 1182

Query: 247  RMKKFADSKRREL-KFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEVA 306
            +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ +++  G   
Sbjct: 1183 KMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNN 1242

Query: 307  YRLDLPPEAS--IHNVFHISQLK 323
            Y LDLP        + FH+S L+
Sbjct: 1243 YELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc08g0206641 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-56
Identity = 124/323 (38.39%), Postives = 178/323 (55.11%), Query Frame = 0


Query: 7    WKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMN 66
            WKG+++ I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI  LP++ G N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   VIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKE 126
             + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTF 186
              +  N ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HSSTRTTPFQTVY----GRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIAQN 246
            HS+T+ TPF+ V+       P  L S+ DK   N++      E       +KE+L     
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTVKEHLNTNNI 1182

Query: 247  RMKKFADSKRREL-KFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEVA 306
            +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ +++  G   
Sbjct: 1183 KMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNN 1242

Query: 307  YRLDLPPEAS--IHNVFHISQLK 323
            Y LDLP        + FH+S L+
Sbjct: 1243 YELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc08g0206641 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-56
Identity = 124/323 (38.39%), Postives = 178/323 (55.11%), Query Frame = 0


Query: 7    WKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMN 66
            WKG+++ I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI  LP++ G N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   VIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKE 126
             + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTF 186
              +  N ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HSSTRTTPFQTVY----GRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIAQN 246
            HS+T+ TPF+ V+       P  L S+ DK   N++      E       +KE+L     
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTVKEHLNTNNI 1182

Query: 247  RMKKFADSKRREL-KFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEVA 306
            +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ +++  G   
Sbjct: 1183 KMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNN 1242

Query: 307  YRLDLPPEAS--IHNVFHISQLK 323
            Y LDLP        + FH+S L+
Sbjct: 1243 YELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc08g0206641 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-56
Identity = 124/323 (38.39%), Postives = 178/323 (55.11%), Query Frame = 0


Query: 7    WKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMN 66
            WKG+++ I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI  LP++ G N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   VIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKE 126
             + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTF 186
              +  N ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HSSTRTTPFQTVY----GRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIAQN 246
            HS+T+ TPF+ V+       P  L S+ DK   N++      E       +KE+L     
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTVKEHLNTNNI 1182

Query: 247  RMKKFADSKRREL-KFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEVA 306
            +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ +++  G   
Sbjct: 1183 KMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNN 1242

Query: 307  YRLDLPPEAS--IHNVFHISQLK 323
            Y LDLP        + FH+S L+
Sbjct: 1243 YELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc08g0206641 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.1e-56
Identity = 124/323 (38.39%), Postives = 178/323 (55.11%), Query Frame = 0


Query: 7    WKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMN 66
            WKG+++ I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI  LP++ G N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   VIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKE 126
             + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTF 186
              +  N ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I   +  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HSSTRTTPFQTVY----GRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIAQN 246
            HS+T+ TPF+ V+       P  L S+ DK   N++      E       +KE+L     
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTVKEHLNTNNI 1182

Query: 247  RMKKFADSKRREL-KFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEVA 306
            +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ +++  G   
Sbjct: 1183 KMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNN 1242

Query: 307  YRLDLPPEAS--IHNVFHISQLK 323
            Y LDLP        + FH+S L+
Sbjct: 1243 YELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc08g0206641 vs. ExPASy TrEMBL
Match: A0A5D3CT96 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001230 PE=4 SV=1)

HSP 1 Score: 901.7 bits (2329), Expect = 1.2e-258
Identity = 437/438 (99.77%), Postives = 438/438 (100.00%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKLQDSKEERENGNEIVD
Sbjct: 1519 GKLQDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. ExPASy TrEMBL
Match: A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 1.7e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKL DSKEERENGNEIVD
Sbjct: 1519 GKLHDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. ExPASy TrEMBL
Match: A0A5D3DWA9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001670 PE=4 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 1.7e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKL DSKEERENGNEIVD
Sbjct: 1519 GKLHDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. ExPASy TrEMBL
Match: A0A5D3DU86 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00470 PE=4 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 1.7e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKL DSKEERENGNEIVD
Sbjct: 1519 GKLHDSKEERENGNEIVD 1536

[Close]

BLAST of Cmc08g0206641 vs. ExPASy TrEMBL
Match: A0A5D3BBH7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00100 PE=4 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 2.2e-257
Identity = 435/438 (99.32%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1    MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 60
            MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP
Sbjct: 1099 MSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLP 1158

Query: 61   KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 120
            KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV
Sbjct: 1159 KAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFV 1218

Query: 121  SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 180
            SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL
Sbjct: 1219 SNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAEL 1278

Query: 181  WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNNEVEALLKERDLAISALKENLTIA 240
            WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPN+EVEALLKERDLAISALKENLTIA
Sbjct: 1279 WYNTTFHSSTRTTPFQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIA 1338

Query: 241  QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRIIETIGEV 300
            QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRI ETIGEV
Sbjct: 1339 QNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEV 1398

Query: 301  AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 360
            AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL
Sbjct: 1399 AYRLDLPPEASIHNVFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPEL 1458

Query: 361  GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKK 420
            GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKV LEPRGIVRPPIINVYKRRGKK
Sbjct: 1459 GANEWLVKWKGLPDSEATWESVYSMNQQFPSFHLEDKVSLEPRGIVRPPIINVYKRRGKK 1518

Query: 421  GKLQDSKEERENGNEIVD 439
            GKLQDSKEERENGNEIVD
Sbjct: 1519 GKLQDSKEERENGNEIVD 1536

The following BLAST results are available for this feature:

BLAST of Cmc08g0206641 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15071.1	2.4e-258	99.77	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK21035.1	3.5e-257	99.32	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gyp...	[more]
TYK27058.1	3.5e-257	99.32	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK27963.1	3.5e-257	99.32	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ96663.1	4.6e-257	99.32	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0206641 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.1e-56	38.39	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.1e-56	38.39	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.1e-56	38.39	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.1e-56	38.39	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.1e-56	38.39	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0206641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CT96	1.2e-258	99.77	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3E325	1.7e-257	99.32	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DWA9	1.7e-257	99.32	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DU86	1.7e-257	99.32	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BBH7	2.2e-257	99.32	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc08g0206641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 230..250
None	No IPR available	GENE3D	2.40.50.40		coord: 346..393 e-value: 1.5E-6 score: 29.7
None	No IPR available	GENE3D	1.10.340.70		coord: 1..28 e-value: 1.1E-5 score: 27.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..438
None	No IPR available	PANTHER	PTHR46148:SF38	PROTEIN NYNRIN-LIKE	coord: 109..379
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 109..379
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 38..238 e-value: 2.9E-51 score: 175.6
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 5..29 e-value: 6.9E-9 score: 35.6
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 349..381 e-value: 9.7E-7 score: 28.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 38..202 score: 22.112295
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 346..381 score: 10.222601
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 40..202
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 311..387

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0206641.1	Cmc08g0206641.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding