Cmc07g0203401 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0203401
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr07: 25192261 .. 25194880 (+)
RNA-Seq ExpressionCmc07g0203401
SyntenyCmc07g0203401
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATTTCGACATATATTTATCGATTACATAATCACATGGTTGATTGGAGATTTTTTTTTCTCTTTTTTGGGATGATTTTCATGGAATGTATTTCTGAAAAAATCTATATAAGATTTCAATTATGCTGCCTGAAAACTTTAGTTTAGGTTTAGATTATGTCTCATCATTAAAAACAAAAATAATATATGGTGATTATTCAAAAAATAAAAGTTATACGTGGGTATCACTTGTGTTTAAAAATGATTTTAATTAATGTAAATAAAAAACAATACCGAATACAAAATGTATGTAATCATATCTTTCAACAATTTGAAATGCATATAGTCCAATTAAACGAATAGCATAAGGATTAAGCTATTAGCAAATGGGAATGGGTGCTCCATTCCACTCCTTTAAGCACTCGAAGATGGAGTCGATCATTTTTCCTTGACTTAATGCAGTGAATACCTTCTCGCACTCTTCTCCTGGAGAAATGACCTTTTCGCCGGTTAGCAATTTTGTTCCTAACTCCTCTCTCACGAATTTGTATAATGGGTAAGACCTACAATCTTTGATTTGATTTTTAATTTTAGAATTTCCATTCTCATATGCCAACCTTACGTTTTCAACCTCCTTTGGTAAAATTGCCTTCAACTCCTCTTCGAAAGCACCGATCTTTTGGAAGATTGAGGTGTTCGCGTTCGTTTCGTTATCGCCATTTTTAAGTGCATGCTCAACAAGAATTTGCCTTAGCTTTTGCATAAGCGGGTAGGTAGCACTGCATGGATCATCTATGTATGCAAAAGTGTATTCTCTGTCGACAACTTTGAGTAAATCTTTCTCACAAAATCTTGATGGATGAAGTGCGCCATTAGAAGAGGTAGTCAACACTTTTTTTGCTACTTGGCTAACTGTGTTTTTCACTGTGCTCTTCAAGTTTTCCTCCAAATGCCTCAAGTCAATTGCTTGACATAAAGCCACTAAGAATGTGGAAGACATGAGTTTAAGAATATCGATGGCTTCAGCTGTTTTCCTTGATGAAATTAAACCAAGAGAGTTAACATCTTGGTTCTGTTGCTCGGCGCTTTGAACGTGACTTGTCACGGGATTTGCAAGATATTGAAGCTCAGAGCAGTATGAAGCCATGGCAATTTCAGCACCTTTAAAGCCATAATCCAAGCTTGGATTTCTACTTGCAGAAAGGTTAGAAGGCAAACCATTATTGTAAAAATCATTGACCAATTCTGAAAATTGAGCAAACATTAGCTTTCCAATGGATGCAACGGCCAAACGAGTGTTGTCCATAGAAACTCCAATCGGTGTTCCTTGGAAGTTACCTCCATGTAGTGCCTTGTTTCTTGAAACATCAATCAAAGGATTGTCGTTGACTGAATTAATTTCCCTCTCAATTGACTTGGTGGAGAAACGAATCACTTCAATCAAGGGACCCAACCATTGAGGAGAAGTTCTAAGAGCATAACGATCTTGTTTGGGCTTTTGGAGAGGATCCATTTCATGCAATTTCTTTGCCGTTTTCATGTAGGAGCTGCCATCTAAAATGTGCTCCATGATTGCAGCTGCTTCAATTTGACCAGGGTGGTGCTTCAACTTATGGGTCAAATGGTCGGTGAATTCGGGTTTTCCTTGCATCACCTCAGCAAATATTGCAGATAAAATTTCAGACAAAACAGCTAAAATATTTGCCTCAAAGAGAACAATGGAAGCCAATCCAGAACCGACGGCAGTGCCATTAACTAGAGCAAGGCCTTCCTTAGGTTGCAACTCAAAGAACCCAGAATCAATACCAGCTTGCTCAAAAGCAGCCTTTGCATCGAGGGTTTCTCCATTAGGTCCAATAGCTTTTGAATTGTGACGACCAGTAAGCAACCCCGCAATATAAGACAAAGGAACCAAATCTCCTGAAGCAGTAATTGTTCCTCGAAGTGGCAAACATGGAGTGACGTTGTTGTTCAAGAGATTAGCAATCGCTTCCAAAATCTCGAATCGAATGCCAGAATACCCTTGCAGAAGAGTGTTGATTCTCACCAACATGGCTGCTCTTGTTGCGGAATGAGGCAAAGTGTGATTCGATTCACTTCCATTCCCAAAGATGCCAGAATTTAGGAATCGAATCAACTCCTTTTGAAGAGCTCCACCTTGATTGGTTCTTCTATGGGAAGTAGCACCAAAGCCAGTAGTGACACCATAACTATCGGTGCCTTTACCCATGCTCTCCATCACCCAATCGCTGCTAGCTTTGACGCCAGCCCTTGCAGATTCAGCCAATTCTACAACGACATCATTATCACGAGTGGCAATGGCAGCAACCTGAGAAATGGTGAGAGTTTCTCCTCCAAGCTTCACCAGAGGCCTTCGATACTCTTCCACCATCCTTTTCACCTCATCCAAATGACTTCCCTTCATGGAATCAGCCGCCAAACCCCAGTTGAGTGGATCCTGATGGCTATTGCACAAGCTCTCCACCGAACCATTTTGGTTAGCACAAACATTCTGAGCCATATATAACTGTATTTGTATAAACGACAAAGATAAGATCAGTACAGAGTTGAACGAAAAGATGGGAGTTCAAGTATGAATGGAATTGGATCTGAATTGGTTATCTGGTGATGAGATTTGAAGG

mRNA sequence

TAATTTCGACATATATTTATCGATTACATAATCACATGGTTGATTGGAGATTTTTTTTTCTCTTTTTTGGGATGATTTTCATGGAATGTATTTCTGAAAAAATCTATATAAGATTTCAATTATGCTGCCTGAAAACTTTAGTTTAGGTTTAGATTATGTCTCATCATTAAAAACAAAAATAATATATGGTGATTATTCAAAAAATAAAAGTTATACGTGGGTATCACTTGTGTTTAAAAATGATTTTAATTAATGTAAATAAAAAACAATACCGAATACAAAATGTATGTAATCATATCTTTCAACAATTTGAAATGCATATAGTCCAATTAAACGAATAGCATAAGGATTAAGCTATTAGCAAATGGGAATGGGTGCTCCATTCCACTCCTTTAAGCACTCGAAGATGGAGTCGATCATTTTTCCTTGACTTAATGCAGTGAATACCTTCTCGCACTCTTCTCCTGGAGAAATGACCTTTTCGCCGGTTAGCAATTTTGTTCCTAACTCCTCTCTCACGAATTTGTATAATGGGTAAGACCTACAATCTTTGATTTGATTTTTAATTTTAGAATTTCCATTCTCATATGCCAACCTTACGTTTTCAACCTCCTTTGGTAAAATTGCCTTCAACTCCTCTTCGAAAGCACCGATCTTTTGGAAGATTGAGGTGTTCGCGTTCGTTTCGTTATCGCCATTTTTAAGTGCATGCTCAACAAGAATTTGCCTTAGCTTTTGCATAAGCGGGTAGGTAGCACTGCATGGATCATCTATGTATGCAAAAGTGTATTCTCTGTCGACAACTTTGAGTAAATCTTTCTCACAAAATCTTGATGGATGAAGTGCGCCATTAGAAGAGGTAGTCAACACTTTTTTTGCTACTTGGCTAACTGTGTTTTTCACTGTGCTCTTCAAGTTTTCCTCCAAATGCCTCAAGTCAATTGCTTGACATAAAGCCACTAAGAATGTGGAAGACATGAGTTTAAGAATATCGATGGCTTCAGCTGTTTTCCTTGATGAAATTAAACCAAGAGAGTTAACATCTTGGTTCTGTTGCTCGGCGCTTTGAACGTGACTTGTCACGGGATTTGCAAGATATTGAAGCTCAGAGCAGTATGAAGCCATGGCAATTTCAGCACCTTTAAAGCCATAATCCAAGCTTGGATTTCTACTTGCAGAAAGGTTAGAAGGCAAACCATTATTGTAAAAATCATTGACCAATTCTGAAAATTGAGCAAACATTAGCTTTCCAATGGATGCAACGGCCAAACGAGTGTTGTCCATAGAAACTCCAATCGGTGTTCCTTGGAAGTTACCTCCATGTAGTGCCTTGTTTCTTGAAACATCAATCAAAGGATTGTCGTTGACTGAATTAATTTCCCTCTCAATTGACTTGGTGGAGAAACGAATCACTTCAATCAAGGGACCCAACCATTGAGGAGAAGTTCTAAGAGCATAACGATCTTGTTTGGGCTTTTGGAGAGGATCCATTTCATGCAATTTCTTTGCCGTTTTCATGTAGGAGCTGCCATCTAAAATGTGCTCCATGATTGCAGCTGCTTCAATTTGACCAGGGTGGTGCTTCAACTTATGGGTCAAATGGTCGGTGAATTCGGGTTTTCCTTGCATCACCTCAGCAAATATTGCAGATAAAATTTCAGACAAAACAGCTAAAATATTTGCCTCAAAGAGAACAATGGAAGCCAATCCAGAACCGACGGCAGTGCCATTAACTAGAGCAAGGCCTTCCTTAGGTTGCAACTCAAAGAACCCAGAATCAATACCAGCTTGCTCAAAAGCAGCCTTTGCATCGAGGGTTTCTCCATTAGGTCCAATAGCTTTTGAATTGTGACGACCAGTAAGCAACCCCGCAATATAAGACAAAGGAACCAAATCTCCTGAAGCAGTAATTGTTCCTCGAAGTGGCAAACATGGAGTGACGTTGTTGTTCAAGAGATTAGCAATCGCTTCCAAAATCTCGAATCGAATGCCAGAATACCCTTGCAGAAGAGTGTTGATTCTCACCAACATGGCTGCTCTTGTTGCGGAATGAGGCAAAGTGTGATTCGATTCACTTCCATTCCCAAAGATGCCAGAATTTAGGAATCGAATCAACTCCTTTTGAAGAGCTCCACCTTGATTGGTTCTTCTATGGGAAGTAGCACCAAAGCCAGTAGTGACACCATAACTATCGGTGCCTTTACCCATGCTCTCCATCACCCAATCGCTGCTAGCTTTGACGCCAGCCCTTGCAGATTCAGCCAATTCTACAACGACATCATTATCACGAGTGGCAATGGCAGCAACCTGAGAAATGGTGAGAGTTTCTCCTCCAAGCTTCACCAGAGGCCTTCGATACTCTTCCACCATCCTTTTCACCTCATCCAAATGACTTCCCTTCATGGAATCAGCCGCCAAACCCCAGTTGAGTGGATCCTGATGGCTATTGCACAAGCTCTCCACCGAACCATTTTGGTTAGCACAAACATTCTGAGCCATATATAACTGTATTTGTATAAACGACAAAGATAAGATCAGTACAGAGTTGAACGAAAAGATGGGAGTTCAAGTATGAATGGAATTGGATCTGAATTGGTTATCTGGTGATGAGATTTGAAGG

Coding sequence (CDS)

ATGGGAAGTAGCACCAAAGCCAGTAGTGACACCATAACTATCGGTGCCTTTACCCATGCTCTCCATCACCCAATCGCTGCTAGCTTTGACGCCAGCCCTTGCAGATTCAGCCAATTCTACAACGACATCATTATCACGAGTGGCAATGGCAGCAACCTGAGAAATGGTGAGAGTTTCTCCTCCAAGCTTCACCAGAGGCCTTCGATACTCTTCCACCATCCTTTTCACCTCATCCAAATGACTTCCCTTCATGGAATCAGCCGCCAAACCCCAGTTGAGTGGATCCTGATGGCTATTGCACAAGCTCTCCACCGAACCATTTTGGTTAGCACAAACATTCTGAGCCATATATAA

Protein sequence

MGSSTKASSDTITIGAFTHALHHPIAASFDASPCRFSQFYNDIIITSGNGSNLRNGESFSSKLHQRPSILFHHPFHLIQMTSLHGISRQTPVEWILMAIAQALHRTILVSTNILSHI
Homology
[Close]
BLAST of Cmc07g0203401 vs. NCBI nr
Match: KVI09495.1 (hypothetical protein Ccrd_012103, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-10
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0 

Query: 4   STKASSDTITIGAFTHALHHPIAASFDASPCRFSQ--FYNDIIITSGNGSNLRNGESFSS 63
           S++A  +T+TI +F HALHHP+      SP R  Q  F++  +  S + S+LR+ +S SS
Sbjct: 149 SSEAGGNTVTISSFAHALHHPVTTGLHPSPRRLRQLHFHHRTVTGSRDSSHLRHRQSLSS 208

Query: 64  KLHQRPSILFHHPFHLIQMTSLHGISRQTPVEW 95
           +LH R   L +H  HLI+M   H +   TPV+W
Sbjct: 209 QLHHRLPELRNHSLHLIKMAPRHRLCCHTPVQW 241

[Close]
BLAST of Cmc07g0203401 vs. NCBI nr
Match: RWV89297.1 (hypothetical protein GW17_00048556 [Ensete ventricosum])

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-06
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0 

Query: 10  DTITIGAFTHALHHPIAASFDASPCRFSQFY-NDIIITSGNGSNLRNGESFSSKLHQRPS 69
           DT+ +GA  HA+HHP+AA  DA P R  Q + N  +   G+  +LR+ E  + + HQ   
Sbjct: 33  DTVAVGAVGHAVHHPLAAGADALPRRLRQLHPNRRVGRRGDRGHLRDFERRALESHQGLP 92

Query: 70  ILFHHPFHLIQMTSLHGISRQTPVE 94
            L  HP HL+++   HG+ R  PV+
Sbjct: 93  ELPQHPLHLLEVAPRHGLRRGAPVQ 117

[Close]
BLAST of Cmc07g0203401 vs. NCBI nr
Match: RZR81533.1 (hypothetical protein BHM03_00007786 [Ensete ventricosum])

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-06
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0 

Query: 10  DTITIGAFTHALHHPIAASFDASPCRFSQFY-NDIIITSGNGSNLRNGESFSSKLHQRPS 69
           DT+ +GA  HA+HHP+AA  DA P R  Q + N  +   G+  +LR+ E  + + HQ   
Sbjct: 33  DTVAVGAVGHAVHHPLAAGADALPRRLRQLHPNRRVGRRGDRGHLRDFERRALESHQGLP 92

Query: 70  ILFHHPFHLIQMTSLHGISRQTPVE 94
            L  HP HL+++   HG+ R  PV+
Sbjct: 93  ELPQHPLHLLEVAPRHGLRRGAPVQ 117

[Close]
BLAST of Cmc07g0203401 vs. NCBI nr
Match: RWW78689.1 (hypothetical protein BHE74_00013075 [Ensete ventricosum])

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-06
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0 

Query: 10  DTITIGAFTHALHHPIAASFDASPCRFSQFY-NDIIITSGNGSNLRNGESFSSKLHQRPS 69
           DT+ +GA  HA+HHP+AA  DA P R  Q + N  +   G+  +LR+ E  + + HQ   
Sbjct: 33  DTVAVGAVGHAVHHPLAAGADALPRRLRQLHPNRRVGRRGDRGHLRDFERRALESHQGLP 92

Query: 70  ILFHHPFHLIQMTSLHGISRQTPVE 94
            L  HP HL+++   HG+ R  PV+
Sbjct: 93  ELPQHPLHLLEVAPRHGLRRGAPVQ 117

[Close]
BLAST of Cmc07g0203401 vs. NCBI nr
Match: RYR00828.1 (hypothetical protein Ahy_B07g088933 [Arachis hypogaea])

HSP 1 Score: 55.8 bits (133), Expect = 2.8e-04
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1   MGSSTKASSDTITIGAFTHALHHPIAASFDASPCRFSQFYNDIIITSGNGSNLRNG 57
           +G S KAS +TI   AF +A+H P+AA  DA P R S+ + D+ +T GNGS+LR+G
Sbjct: 86  VGGSAKASGNTIDGNAFFNAVHDPLAAGLDACPRRLSELHLDLRLTLGNGSHLRHG 141

[Close]
BLAST of Cmc07g0203401 vs. ExPASy TrEMBL
Match: A0A118K5R4 (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_012103 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.7e-10
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0 

Query: 4   STKASSDTITIGAFTHALHHPIAASFDASPCRFSQ--FYNDIIITSGNGSNLRNGESFSS 63
           S++A  +T+TI +F HALHHP+      SP R  Q  F++  +  S + S+LR+ +S SS
Sbjct: 149 SSEAGGNTVTISSFAHALHHPVTTGLHPSPRRLRQLHFHHRTVTGSRDSSHLRHRQSLSS 208

Query: 64  KLHQRPSILFHHPFHLIQMTSLHGISRQTPVEW 95
           +LH R   L +H  HLI+M   H +   TPV+W
Sbjct: 209 QLHHRLPELRNHSLHLIKMAPRHRLCCHTPVQW 241

[Close]
BLAST of Cmc07g0203401 vs. ExPASy TrEMBL
Match: A0A444CTS8 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00048556 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0 

Query: 10  DTITIGAFTHALHHPIAASFDASPCRFSQFY-NDIIITSGNGSNLRNGESFSSKLHQRPS 69
           DT+ +GA  HA+HHP+AA  DA P R  Q + N  +   G+  +LR+ E  + + HQ   
Sbjct: 33  DTVAVGAVGHAVHHPLAAGADALPRRLRQLHPNRRVGRRGDRGHLRDFERRALESHQGLP 92

Query: 70  ILFHHPFHLIQMTSLHGISRQTPVE 94
            L  HP HL+++   HG+ R  PV+
Sbjct: 93  ELPQHPLHLLEVAPRHGLRRGAPVQ 117

[Close]
BLAST of Cmc07g0203401 vs. ExPASy TrEMBL
Match: A0A444YFY0 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B07g088933 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1   MGSSTKASSDTITIGAFTHALHHPIAASFDASPCRFSQFYNDIIITSGNGSNLRNG 57
           +G S KAS +TI   AF +A+H P+AA  DA P R S+ + D+ +T GNGS+LR+G
Sbjct: 86  VGGSAKASGNTIDGNAFFNAVHDPLAAGLDACPRRLSELHLDLRLTLGNGSHLRHG 141

The following BLAST results are available for this feature:
BLAST of Cmc07g0203401 vs. NCBI nr
Match NameE-valueIdentityDescription
KVI09495.17.7e-1040.86hypothetical protein Ccrd_012103, partial [Cynara cardunculus var. scolymus][more]
RWV89297.13.9e-0638.82hypothetical protein GW17_00048556 [Ensete ventricosum][more]
RZR81533.13.9e-0638.82hypothetical protein BHM03_00007786 [Ensete ventricosum][more]
RWW78689.13.9e-0638.82hypothetical protein BHE74_00013075 [Ensete ventricosum][more]
RYR00828.12.8e-0450.00hypothetical protein Ahy_B07g088933 [Arachis hypogaea][more]
BLAST of Cmc07g0203401 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc07g0203401 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A118K5R43.7e-1040.86Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 ... [more]
A0A444CTS81.9e-0638.82Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00048556 PE=4 SV=1[more]
A0A444YFY01.4e-0450.00Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B07g088933 PE=4 SV=1[more]
BLAST of Cmc07g0203401 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0203401.1Cmc07g0203401.1mRNA