Cmc07g0202371 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0202371
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionEndonuclease III homolog
LocationCMiso1.1chr07: 24478249 .. 24480795 (-)
RNA-Seq ExpressionCmc07g0202371
SyntenyCmc07g0202371
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCCCATGTCTTTTCTAATATTTTCTTCAATTGACAAAAGAACTTTCAGGAGTGCAGGAGCAGCATTGCGTCTCCAAGAAAGTGGTCTTCTTACTGCTGAAGCCATGGACAAAGCTGATGAAGAAACCATTAAAAGTTTGATTTACCCGGTATTTGTTTTTGGAAATTATTGAGCCAGGGCACATAAGTTTTCTCGTTGAATCACGTGAATAGAAATATCTGAAAAATAGCATTTATATTTGTATGGTTGTTCTGTTTTTCACTTTTCTCAACGAATGTTCCACTTTCTGCCAATAATTTAGAGTTTTTTTGTTATCCATCTTGCAGGTTGGATTTTATTCCACAAAGGCTAAGAATTTGAAGAAGATTGCAAAAATATGTCTTATGAAGTATGGTGGGGACATACCTAGATCATTGGAGGAGCTACTTCTGCTACCTGGGATAGGCCCTAAGATTGCACATTTGGTATGATAGATTGTGTTTTCTTAGAAAAGAAGGAATTTTCCGGGTAATGGGTATGCTTCAATGACTCATCATATTTCATATGTGACATTTAGATCATGATTATGGCTTGGAACGATGTTCAGGGGATATGTGTAGACACTCATGTGCATCGCATTTGCAATCGGCTTGGGTGGGTGTCTGGGAAAGGCTCAAAACAGGTAACTGTAGAGTGTGGAATGCGACTCCACTTGTTTACTAACATGAGTAGATTCTGACTTGAGATTTGAATATCATCCTTTTCCTAACTTCAAAATTTTTCTCTGATGCTAAAATTGTTAGCAAGTCAAGTGGACTCCCTCAAGTGAATCAAACTATTCCTCTTTTTAAGTTTTTTCATTCAATAGATTCAACTCATTGCGGCAATTATCATCGTTTGTTTCCAAAACATGTCATTGCTATAATTTGCTTTCTTTTTTCCCTTCCTAGAAAACATCAACTCCTGAAGAAACTCGAGTAGGATTAGAACTGTGGCTGCCAAAAGAAGAATGGGTTCCAATTAATCCTCTTCTGGTATGTAATGTTCTTTTACAAATAGTTGCTGCCCTGGGTACCATGATACGATGAATTTGATGGCATTGTTTCCTTGTAAACGTACTGTACCATATATTTTACCCATAGGCAGCAATACTCTTACTCATAATTGTGTTCGTATATCTGTATATTCACACGCGGTGTAGGTTGTTTACCCCTTGGGAAAACACCCTACTGCATCTACAAATTGAGTCTCTATTTTCTTATTGCTATTTGCAATGATTTATGCTGCTTTTAGTCCAAAGAACCCTTAAGAAAATGATTTCCAAGTAAAAATTGCAGATATATATTATTAATTTTATGAGTTATACTAACTTTGGTAAAGTAAGGGTTTGTACTTGCTCTAATCATCTGCCATATAAACTAGTGGTCTGGGAGAAATATGCTCTACCCATGCATTTTTTTTAAAACAACTTTCGTTGGAAAGAATAAAAGAATACACGAGCATAGAAAAAAAGTCACATTCCTCTGCAGGAAAGGACTCTGACTATGCAAAATAGCTACTATAGAATAGTTACAAAAGTCCTTTGAAACCAAAGCCCACAAAAGAACATGAAAGCAAACGAGAGATCAAATCCTCACTGAGGTGTTTAACCACCCCTCTAAAAGACCTACTTTTCCACTCACGCCCAGAAGTTCACGATCACACGAACATCCCATCAAACCATAAAAAGTGACCCTTCTACCCACAAGTCAAATTGAGGAGGAACTCATTGATCATATCATTAGGAGTGCAGTTCAATTTTTTTTGTTAATGTTCTTCAATATCCATCGATCATTCTCAAGTTTTATACTGTAAAAGTATAATTCAAATTGACAAAGTTCAATTGTTTTTTGTTAATGTTCTTCATTTTTGGGCTTCACCTCTACTTTTTTTAAGCAATTAGTGAGTTGGTGACTTCTGCTCTTTTGCTTCGTGTGATCTGAAGTTTGTTGGGTTGTGGATTCTAGGTTTAAGAAACATTCTCCCCTGTAATTTCTTATTACGTCTCCATTTATTGATTTTTTCTTCAATTATTTTCTTTAATCATTGTTGGCATGTGAAACAGGTTGGATTTGGACAGACTATTTGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGTGACCTATGCCCATCTGCATTCAAGGAGTCTTCAAGCCCATCTCCCAAGTTAAAGGGTTCAAGTTCTACCAAAAAGTTGTGATCGTCTTTCTGTATGAATGAATATATTTACTAGTCATACAATTCCCCCCAAGTTTTTGATCTTCTATCTCTTTTTTTTTTTCTCTTTTTTGACACCATAATGGTTTACAGATTTAGAGCTTCCATTATGGTTTCTATCGCCAAGTGTTGATAGATAGATAGGTGGATATTGAAGGATTTCAATTGGCCAATGTTGTGTAGAACGAAACTTGTTATTGATGTTATAATGTATTGATGCTCTTGGTACATGTTTTATACATTATACGATAATTCATCATCATTATTATTGACTAATTCTTCATGGAACTGTTTTATGAT

mRNA sequence

CTCTCCCATGTCTTTTCTAATATTTTCTTCAATTGACAAAAGAACTTTCAGGAGTGCAGGAGCAGCATTGCGTCTCCAAGAAAGTGGTCTTCTTACTGCTGAAGCCATGGACAAAGCTGATGAAGAAACCATTAAAAGTTTGATTTACCCGGTTGGATTTTATTCCACAAAGGCTAAGAATTTGAAGAAGATTGCAAAAATATGTCTTATGAAGTATGGTGGGGACATACCTAGATCATTGGAGGAGCTACTTCTGCTACCTGGGATAGGCCCTAAGATTGCACATTTGATCATGATTATGGCTTGGAACGATGTTCAGGGGATATGTGTAGACACTCATGTGCATCGCATTTGCAATCGGCTTGGGTGGGTGTCTGGGAAAGGCTCAAAACAGAAAACATCAACTCCTGAAGAAACTCGAGTAGGATTAGAACTGTGGCTGCCAAAAGAAGAATGGGTTCCAATTAATCCTCTTCTGGTTGGATTTGGACAGACTATTTGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGTGACCTATGCCCATCTGCATTCAAGGAGTCTTCAAGCCCATCTCCCAAGTTAAAGGGTTCAAGTTCTACCAAAAAGTTGTGATCGTCTTTCTGTATGAATGAATATATTTACTAGTCATACAATTCCCCCCAAGTTTTTGATCTTCTATCTCTTTTTTTTTTTCTCTTTTTTGACACCATAATGGTTTACAGATTTAGAGCTTCCATTATGGTTTCTATCGCCAAGTGTTGATAGATAGATAGGTGGATATTGAAGGATTTCAATTGGCCAATGTTGTGTAGAACGAAACTTGTTATTGATGTTATAATGTATTGATGCTCTTGGTACATGTTTTATACATTATACGATAATTCATCATCATTATTATTGACTAATTCTTCATGGAACTGTTTTATGAT

Coding sequence (CDS)

ATGTCTTTTCTAATATTTTCTTCAATTGACAAAAGAACTTTCAGGAGTGCAGGAGCAGCATTGCGTCTCCAAGAAAGTGGTCTTCTTACTGCTGAAGCCATGGACAAAGCTGATGAAGAAACCATTAAAAGTTTGATTTACCCGGTTGGATTTTATTCCACAAAGGCTAAGAATTTGAAGAAGATTGCAAAAATATGTCTTATGAAGTATGGTGGGGACATACCTAGATCATTGGAGGAGCTACTTCTGCTACCTGGGATAGGCCCTAAGATTGCACATTTGATCATGATTATGGCTTGGAACGATGTTCAGGGGATATGTGTAGACACTCATGTGCATCGCATTTGCAATCGGCTTGGGTGGGTGTCTGGGAAAGGCTCAAAACAGAAAACATCAACTCCTGAAGAAACTCGAGTAGGATTAGAACTGTGGCTGCCAAAAGAAGAATGGGTTCCAATTAATCCTCTTCTGGTTGGATTTGGACAGACTATTTGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGTGACCTATGCCCATCTGCATTCAAGGAGTCTTCAAGCCCATCTCCCAAGTTAAAGGGTTCAAGTTCTACCAAAAAGTTGTGA

Protein sequence

MSFLIFSSIDKRTFRSAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSSTKKL
Homology
[Close]
BLAST of Cmc07g0202371 vs. NCBI nr
Match: KAA0044590.1 (endonuclease III-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 192/203 (94.58%), Postives = 194/203 (95.57%), Query Frame = 0 

Query: 2   SFLIFSSIDKRTFRSAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKK 61
           S L   + D  T  +AGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKK
Sbjct: 187 SLLSSQTKDHVTHGNAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKK 246

Query: 62  IAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGW 121
           IAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGW
Sbjct: 247 IAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGW 306

Query: 122 VSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLC 181
           VSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLC
Sbjct: 307 VSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLC 366

Query: 182 PSAFKESSSPSPKLKGSSSTKKL 205
           PSAFKESSSPSPKLKGSSSTKKL
Sbjct: 367 PSAFKESSSPSPKLKGSSSTKKL 389

[Close]
BLAST of Cmc07g0202371 vs. NCBI nr
Match: TYK16994.1 (endonuclease III-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS
Sbjct: 176 GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 235

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET
Sbjct: 236 LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 295

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG
Sbjct: 296 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 355

Query: 198 SSSTKKL 205
           SSSTKKL
Sbjct: 356 SSSTKKL 362

[Close]
BLAST of Cmc07g0202371 vs. NCBI nr
Match: XP_008453986.1 (PREDICTED: endonuclease III homolog 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS
Sbjct: 200 GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 259

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET
Sbjct: 260 LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 319

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG
Sbjct: 320 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 379

Query: 198 SSSTKKL 205
           SSSTKKL
Sbjct: 380 SSSTKKL 386

[Close]
BLAST of Cmc07g0202371 vs. NCBI nr
Match: XP_004152104.1 (endonuclease III homolog 1, chloroplastic [Cucumis sativus] >KGN53081.2 hypothetical protein Csa_014884 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 4.3e-101
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTA+AMDKADEETIKSLIYPVGFYSTKAKNLKKIA+ICLMKYGGDIPRS
Sbjct: 200 GAALRLQESGLLTADAMDKADEETIKSLIYPVGFYSTKAKNLKKIARICLMKYGGDIPRS 259

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           L ELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET
Sbjct: 260 LAELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 319

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG
Sbjct: 320 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 379

Query: 198 SSSTKKL 205
           SSSTKKL
Sbjct: 380 SSSTKKL 386

[Close]
BLAST of Cmc07g0202371 vs. NCBI nr
Match: XP_038878189.1 (endonuclease III homolog 2, chloroplastic-like isoform X4 [Benincasa hispida])

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100
Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTA+AMDKADE TIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS
Sbjct: 197 GAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 256

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           LEELL+LPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET
Sbjct: 257 LEELLILPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 316

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RV LELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG
Sbjct: 317 RVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 376

Query: 198 SSSTKKL 205
           SSSTKKL
Sbjct: 377 SSSTKKL 383

[Close]
BLAST of Cmc07g0202371 vs. ExPASy Swiss-Prot
Match: B9DFZ0 (Endonuclease III homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH2 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.2e-79
Identity = 141/188 (75.00%), Postives = 163/188 (86.70%), Query Frame = 0 

Query: 18  GAAL-RLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPR 77
           GAA+ RL ++GLLT EA+DKADE TIK LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR
Sbjct: 199 GAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPR 258

Query: 78  SLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEE 137
           +LEELL LPG+GPKIAHL++ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKTS+PEE
Sbjct: 259 TLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQKTSSPEE 318

Query: 138 TRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLK 197
           TRV L+ WLPK EWV IN LLVGFGQTICTPLRP CG CS++++CPSAFKE+ S S KLK
Sbjct: 319 TRVALQQWLPKGEWVAINFLLVGFGQTICTPLRPHCGTCSITEICPSAFKETPSTSSKLK 378

Query: 198 GSSSTKKL 205
            S  +KKL
Sbjct: 379 KSIKSKKL 386

[Close]
BLAST of Cmc07g0202371 vs. ExPASy Swiss-Prot
Match: Q9SIC4 (Endonuclease III homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH1 PE=2 SV=2)

HSP 1 Score: 288.9 bits (738), Expect = 4.5e-77
Identity = 136/182 (74.73%), Postives = 159/182 (87.36%), Query Frame = 0 

Query: 22  RLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEEL 81
           RL ++GLLT EA+DKADE TIK LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++L
Sbjct: 197 RLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDL 256

Query: 82  LLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVGL 141
           L LPGIGPK+AHLI+ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKT++PEETRV L
Sbjct: 257 LSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVAL 316

Query: 142 ELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSST 201
           + WLPKEEWV INPLLVGFGQ ICTP+RP+C  CSVS LCP+AFKE+SSPS KLK S+ +
Sbjct: 317 QQWLPKEEWVAINPLLVGFGQMICTPIRPRCEACSVSKLCPAAFKETSSPSSKLKKSNRS 376

Query: 202 KK 204
           K+
Sbjct: 377 KE 378

[Close]
BLAST of Cmc07g0202371 vs. ExPASy Swiss-Prot
Match: A7M7B9 (Endonuclease III-like protein 1 OS=Gallus gallus OX=9031 GN=NTHL1 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.2e-46
Identity = 96/181 (53.04%), Postives = 123/181 (67.96%), Query Frame = 0 

Query: 4   LIFSSIDKRTFRSAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIA 63
           L+ SS  K    SA A LRL++ G LT +++ + D+ T+  +IYPVGF+  K K +K+  
Sbjct: 105 LMLSSQTKDQVTSA-AMLRLRQRG-LTVDSILQMDDATLGQIIYPVGFWRNKVKYIKQTT 164

Query: 64  KICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVS 123
            I   KYGGDIP ++EEL+ LPG+GPK+AHL M +AWN V GI VDTHVHRI NRL WV 
Sbjct: 165 AILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVHRITNRLKWV- 224

Query: 124 GKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPS 183
               K++T  PEETRV LE WLP++ W  IN LLVGFGQ  C P+ P+C  C   D+CP+
Sbjct: 225 ----KKETRYPEETRVALEDWLPRDLWREINWLLVGFGQQTCLPVNPRCKECLNQDICPT 278

Query: 184 A 185
           A
Sbjct: 285 A 278

[Close]
BLAST of Cmc07g0202371 vs. ExPASy Swiss-Prot
Match: Q2KID2 (Endonuclease III-like protein 1 OS=Bos taurus OX=9913 GN=NTHL1 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44
Identity = 89/169 (52.66%), Postives = 116/169 (68.64%), Query Frame = 0 

Query: 16  SAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIP 75
           +AGA  RL+  G LT +++ + D+ T+ +LIYPVGF+ +K K +K+ + I   +Y GDIP
Sbjct: 140 TAGAMQRLRARG-LTVDSILQTDDSTLGALIYPVGFWRSKVKYIKQTSAILQQRYDGDIP 199

Query: 76  RSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPE 135
            S+ EL+ LPG+GPK+AHL M +AW  V GI VDTHVHRI NRL W     +K+ T +PE
Sbjct: 200 ASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPE 259

Query: 136 ETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSA 185
           ETR  LE WLP+E W  IN LLVGFGQ  C P+RP+C  C    LCP+A
Sbjct: 260 ETRRALEEWLPRELWSEINGLLVGFGQQTCLPIRPRCQACLNRALCPAA 302

[Close]
BLAST of Cmc07g0202371 vs. ExPASy Swiss-Prot
Match: P78549 (Endonuclease III-like protein 1 OS=Homo sapiens OX=9606 GN=NTHL1 PE=1 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-44
Identity = 89/169 (52.66%), Postives = 114/169 (67.46%), Query Frame = 0 

Query: 16  SAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIP 75
           +AGA  RL+  G LT +++ + D+ T+  LIYPVGF+ +K K +K+ + I    YGGDIP
Sbjct: 147 TAGAMQRLRARG-LTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIP 206

Query: 76  RSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPE 135
            S+ EL+ LPG+GPK+AHL M +AW  V GI VDTHVHRI NRL W     +K+ T +PE
Sbjct: 207 ASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPE 266

Query: 136 ETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSA 185
           ETR  LE WLP+E W  IN LLVGFGQ  C P+ P+C  C    LCP+A
Sbjct: 267 ETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQALCPAA 309

[Close]
BLAST of Cmc07g0202371 vs. ExPASy TrEMBL
Match: A0A5A7TN21 (Endonuclease III homolog OS=Cucumis melo var. makuwa OX=1194695 GN=NTH1 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.7e-104
Identity = 192/203 (94.58%), Postives = 194/203 (95.57%), Query Frame = 0 

Query: 2   SFLIFSSIDKRTFRSAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKK 61
           S L   + D  T  +AGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKK
Sbjct: 187 SLLSSQTKDHVTHGNAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKK 246

Query: 62  IAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGW 121
           IAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGW
Sbjct: 247 IAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGW 306

Query: 122 VSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLC 181
           VSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLC
Sbjct: 307 VSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLC 366

Query: 182 PSAFKESSSPSPKLKGSSSTKKL 205
           PSAFKESSSPSPKLKGSSSTKKL
Sbjct: 367 PSAFKESSSPSPKLKGSSSTKKL 389

[Close]
BLAST of Cmc07g0202371 vs. ExPASy TrEMBL
Match: A0A5D3D186 (Endonuclease III homolog OS=Cucumis melo var. makuwa OX=1194695 GN=NTH1 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.5e-103
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS
Sbjct: 176 GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 235

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET
Sbjct: 236 LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 295

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG
Sbjct: 296 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 355

Query: 198 SSSTKKL 205
           SSSTKKL
Sbjct: 356 SSSTKKL 362

[Close]
BLAST of Cmc07g0202371 vs. ExPASy TrEMBL
Match: A0A1S3BX24 (Endonuclease III homolog OS=Cucumis melo OX=3656 GN=LOC103494544 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.5e-103
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS
Sbjct: 200 GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 259

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET
Sbjct: 260 LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 319

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG
Sbjct: 320 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 379

Query: 198 SSSTKKL 205
           SSSTKKL
Sbjct: 380 SSSTKKL 386

[Close]
BLAST of Cmc07g0202371 vs. ExPASy TrEMBL
Match: A0A6J1GW15 (Endonuclease III homolog OS=Cucurbita moschata OX=3662 GN=LOC111457673 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.1e-97
Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTA+AMDKADE TIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS
Sbjct: 198 GAALRLQESGLLTADAMDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 257

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           LEELLLLPGIGPKIAHLIMIMAWNDV+GICVDTHVHRICNRLGWVSGKGSKQKTS+PEET
Sbjct: 258 LEELLLLPGIGPKIAHLIMIMAWNDVRGICVDTHVHRICNRLGWVSGKGSKQKTSSPEET 317

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RV LELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVS LCPSAFKE+SSPSPKLK 
Sbjct: 318 RVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKR 377

Query: 198 SSSTK 203
           SSSTK
Sbjct: 378 SSSTK 382

[Close]
BLAST of Cmc07g0202371 vs. ExPASy TrEMBL
Match: A0A6J1GUU3 (Endonuclease III homolog OS=Cucurbita moschata OX=3662 GN=LOC111457673 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.1e-97
Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 0 

Query: 18  GAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 77
           GAALRLQESGLLTA+AMDKADE TIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS
Sbjct: 195 GAALRLQESGLLTADAMDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 254

Query: 78  LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 137
           LEELLLLPGIGPKIAHLIMIMAWNDV+GICVDTHVHRICNRLGWVSGKGSKQKTS+PEET
Sbjct: 255 LEELLLLPGIGPKIAHLIMIMAWNDVRGICVDTHVHRICNRLGWVSGKGSKQKTSSPEET 314

Query: 138 RVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 197
           RV LELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVS LCPSAFKE+SSPSPKLK 
Sbjct: 315 RVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFKETSSPSPKLKR 374

Query: 198 SSSTK 203
           SSSTK
Sbjct: 375 SSSTK 379

[Close]
BLAST of Cmc07g0202371 vs. TAIR 10
Match: AT1G05900.2 (endonuclease III 2 )

HSP 1 Score: 294.7 bits (753), Expect = 5.9e-80
Identity = 141/188 (75.00%), Postives = 163/188 (86.70%), Query Frame = 0 

Query: 18  GAAL-RLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPR 77
           GAA+ RL ++GLLT EA+DKADE TIK LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR
Sbjct: 199 GAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPR 258

Query: 78  SLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEE 137
           +LEELL LPG+GPKIAHL++ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKTS+PEE
Sbjct: 259 TLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQKTSSPEE 318

Query: 138 TRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLK 197
           TRV L+ WLPK EWV IN LLVGFGQTICTPLRP CG CS++++CPSAFKE+ S S KLK
Sbjct: 319 TRVALQQWLPKGEWVAINFLLVGFGQTICTPLRPHCGTCSITEICPSAFKETPSTSSKLK 378

Query: 198 GSSSTKKL 205
            S  +KKL
Sbjct: 379 KSIKSKKL 386

[Close]
BLAST of Cmc07g0202371 vs. TAIR 10
Match: AT2G31450.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 288.9 bits (738), Expect = 3.2e-78
Identity = 136/182 (74.73%), Postives = 159/182 (87.36%), Query Frame = 0 

Query: 22  RLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEEL 81
           RL ++GLLT EA+DKADE TIK LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++L
Sbjct: 197 RLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDL 256

Query: 82  LLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVGL 141
           L LPGIGPK+AHLI+ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKT++PEETRV L
Sbjct: 257 LSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVAL 316

Query: 142 ELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSST 201
           + WLPKEEWV INPLLVGFGQ ICTP+RP+C  CSVS LCP+AFKE+SSPS KLK S+ +
Sbjct: 317 QQWLPKEEWVAINPLLVGFGQMICTPIRPRCEACSVSKLCPAAFKETSSPSSKLKKSNRS 376

Query: 202 KK 204
           K+
Sbjct: 377 KE 378

[Close]
BLAST of Cmc07g0202371 vs. TAIR 10
Match: AT2G31450.2 (DNA glycosylase superfamily protein )

HSP 1 Score: 288.9 bits (738), Expect = 3.2e-78
Identity = 136/182 (74.73%), Postives = 159/182 (87.36%), Query Frame = 0 

Query: 22  RLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEEL 81
           RL ++GLLT EA+DKADE TIK LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++L
Sbjct: 195 RLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDL 254

Query: 82  LLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVGL 141
           L LPGIGPK+AHLI+ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQKT++PEETRV L
Sbjct: 255 LSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVAL 314

Query: 142 ELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSST 201
           + WLPKEEWV INPLLVGFGQ ICTP+RP+C  CSVS LCP+AFKE+SSPS KLK S+ +
Sbjct: 315 QQWLPKEEWVAINPLLVGFGQMICTPIRPRCEACSVSKLCPAAFKETSSPSSKLKKSNRS 374

Query: 202 KK 204
           K+
Sbjct: 375 KE 376

[Close]
BLAST of Cmc07g0202371 vs. TAIR 10
Match: AT1G05900.1 (endonuclease III 2 )

HSP 1 Score: 185.3 bits (469), Expect = 5.0e-47
Identity = 87/113 (76.99%), Postives = 101/113 (89.38%), Query Frame = 0 

Query: 18  GAAL-RLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPR 77
           GAA+ RL ++GLLT EA+DKADE TIK LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR
Sbjct: 199 GAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPR 258

Query: 78  SLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQ 130
           +LEELL LPG+GPKIAHL++ +AWNDVQGICVDTHVHRICNRLGWVS  G+KQ
Sbjct: 259 TLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQ 311

[Close]
BLAST of Cmc07g0202371 vs. TAIR 10
Match: AT4G12740.1 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06
Identity = 38/144 (26.39%), Postives = 68/144 (47.22%), Query Frame = 0 

Query: 38  DEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMI 97
           +++ +  +   +G+Y  +A+ L + AK+ +    G  P     L+ + GIG   A  I  
Sbjct: 219 EKKEVNEMWAGLGYY-RRARFLLEGAKMVVAGTEG-FPNQASSLMKVKGIGQYTAGAIAS 278

Query: 98  MAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLL 157
           +A+N+   + VD +V R+  RL  +S    K + +     ++  +L  P       N  L
Sbjct: 279 IAFNEAVPV-VDGNVIRVLARLKAISA-NPKDRLTARNFWKLAAQLVDPSRPG-DFNQSL 338

Query: 158 VGFGQTICTPLRPKCGNCSVSDLC 182
           +  G T+CT  +P C +C VS  C
Sbjct: 339 MELGATLCTVSKPSCSSCPVSSQC 357

The following BLAST results are available for this feature:
BLAST of Cmc07g0202371 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044590.11.6e-10394.58endonuclease III-like protein 1 [Cucumis melo var. makuwa][more]
TYK16994.11.8e-102100.00endonuclease III-like protein 1 [Cucumis melo var. makuwa][more]
XP_008453986.11.8e-102100.00PREDICTED: endonuclease III homolog 1, chloroplastic-like [Cucumis melo][more]
XP_004152104.14.3e-10198.40endonuclease III homolog 1, chloroplastic [Cucumis sativus] >KGN53081.2 hypothet... [more]
XP_038878189.11.6e-10097.86endonuclease III homolog 2, chloroplastic-like isoform X4 [Benincasa hispida][more]
BLAST of Cmc07g0202371 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B9DFZ08.2e-7975.00Endonuclease III homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH... [more]
Q9SIC44.5e-7774.73Endonuclease III homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH... [more]
A7M7B93.2e-4653.04Endonuclease III-like protein 1 OS=Gallus gallus OX=9031 GN=NTHL1 PE=2 SV=1[more]
Q2KID21.3e-4452.66Endonuclease III-like protein 1 OS=Bos taurus OX=9913 GN=NTHL1 PE=2 SV=1[more]
P785491.7e-4452.66Endonuclease III-like protein 1 OS=Homo sapiens OX=9606 GN=NTHL1 PE=1 SV=2[more]
BLAST of Cmc07g0202371 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TN217.7e-10494.58Endonuclease III homolog OS=Cucumis melo var. makuwa OX=1194695 GN=NTH1 PE=3 SV=... [more]
A0A5D3D1868.5e-103100.00Endonuclease III homolog OS=Cucumis melo var. makuwa OX=1194695 GN=NTH1 PE=3 SV=... [more]
A0A1S3BX248.5e-103100.00Endonuclease III homolog OS=Cucumis melo OX=3656 GN=LOC103494544 PE=3 SV=1[more]
A0A6J1GW153.1e-9795.68Endonuclease III homolog OS=Cucurbita moschata OX=3662 GN=LOC111457673 PE=3 SV=1[more]
A0A6J1GUU33.1e-9795.68Endonuclease III homolog OS=Cucurbita moschata OX=3662 GN=LOC111457673 PE=3 SV=1[more]
BLAST of Cmc07g0202371 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G05900.25.9e-8075.00endonuclease III 2 [more]
AT2G31450.13.2e-7874.73DNA glycosylase superfamily protein [more]
AT2G31450.23.2e-7874.73DNA glycosylase superfamily protein [more]
AT1G05900.15.0e-4776.99endonuclease III 2 [more]
AT4G12740.19.6e-0626.39HhH-GPD base excision DNA repair family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..204
NoneNo IPR availableGENE3D1.10.340.30Hypothetical protein; domain 2coord: 4..96
e-value: 4.3E-23
score: 83.9
NoneNo IPR availablePIRSFPIRSF001435Nthcoord: 8..190
e-value: 9.7E-30
score: 101.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..198
NoneNo IPR availablePANTHERPTHR43286:SF3ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTICcoord: 18..204
NoneNo IPR availablePANTHERPTHR43286ENDONUCLEASE III-LIKE PROTEIN 1coord: 18..204
IPR003651Endonuclease III-like, iron-sulphur cluster loop motifSMARTSM00525ccc3coord: 164..184
e-value: 8.8E-6
score: 35.2
IPR003651Endonuclease III-like, iron-sulphur cluster loop motifPFAMPF10576EndIII_4Fe-2Scoord: 165..181
e-value: 7.8E-4
score: 19.7
IPR003265HhH-GPD domainSMARTSM00478endo3endcoord: 12..163
e-value: 4.6E-46
score: 169.0
IPR003265HhH-GPD domainPFAMPF00730HhH-GPDcoord: 26..131
e-value: 1.2E-17
score: 64.7
IPR003265HhH-GPD domainCDDcd00056ENDO3ccoord: 15..161
e-value: 2.97195E-46
score: 148.159
IPR000445Helix-hairpin-helix motifPFAMPF00633HHHcoord: 69..96
e-value: 1.9E-8
score: 33.8
IPR023170Helix-hairpin-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 97..187
e-value: 1.2E-25
score: 91.3
IPR004036Endonuclease III-like, conserved site-2PROSITEPS01155ENDONUCLEASE_III_2coord: 72..101
IPR004035Endonuclease III, iron-sulphur binding sitePROSITEPS00764ENDONUCLEASE_III_1coord: 165..181
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 19..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0202371.1Cmc07g0202371.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006285 base-excision repair, AP site formation
biological_process GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion
biological_process GO:0006284 base-excision repair
biological_process GO:0006281 DNA repair
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0005634 nucleus
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0140078 class I DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000703 oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
molecular_function GO:0003824 catalytic activity