Cmc07g0202271 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0202271
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr07: 24425084 .. 24426649 (+)
RNA-Seq ExpressionCmc07g0202271
SyntenyCmc07g0202271
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCAATTAAAATAAATACTAGCCAAGATGAACACATGATTTATATATTAGAAAATAAATGAATAAATGGAAGGGAAAAAATGAACAAAAAAACATCCTTTGAAAGAGAAAACATGCAAATCTTACTGAGTTGAAAAACAAATTAATTAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAAAACATAATAATATTCTGTTGGTGGCCCGACCCGACCCGAACCGAACAATCAACAAAGTAATCACTATCCCCTTTCTTCCTCCTTCCGTCCCTTCCCTTTCCCCCAACAATAAAAAAATTCAAAATTACATGGAATATTCGAAAAAAATAAATAATAAAAATTTTAAACATTTTTAAATAATATGTATATATTCTCAACACGTGTCGATCCACAATACAAACACGTGGACAGATTGCACAAATAATCCATGCAACTTCGTGTGTAATTATCGAATCCTTCCTCTTCTGCCTTCATCTTCTTCTTCATCTTCTTCTTCAAGGTTTTATATACAGAACTCTAATGGAAAAACATCCTCTCTGTTTCTCTCTCTCTCATCCTCTGTTTTTTTTTTTTTTTTAATTTGGGAAATTGAAGGTTTGTGATTAAGTGAGAAAGATATATATATGTGTGTATATATATATCTATCATCAACCTAATGCACTAAATCCGCCTCCCTTCATCATTTGTTTAAACTCCTTATAATTCACCATTCCATCTCCATCCACATCCACTTTCATTATCATTTTCTTGCAATCCTCTACAGTTCTCCCTTGTTTAAGCCCCAAGGAAGCTAGAACTGACCTCAATTCGTCGACGGTGATGAATCCATCGCCATTTTGATCGAAGACATTGAAAGCTTCTCTCATATCCTCTTCCTCGTCTCGCTCGTCCATAATCGACTGATACAGCTCACCGAACTCATCAATGTCGACACATCCATCGCCATTGACGTCGATTTTCTCAATCATTTGAGTCAGATCTTTATCAGGAATGAAAATTCCCAAATTCTCCAAGGAGTCGCTTAGTTCCTTCTTGGTGATTCTGCCGTCGCCGTTGCGATCGAACATTTGGAATACTCTTCGTAGTTCCGTTGGATCCATTTGTAAAATGATTATATTATATACTGTGTTTGTGGATTGGATGAGAGATAAATCTCAGCCGGCCGGCGAAGGGCAGGAGGAGATTTGGAGTAGGTGAAAGAGAGAGAGAGGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGGAAATTAAAAAGCGATGAGGATGGGAGGAATGTGATTTAAGGGTTTAATGGAAAGAGAGAGAGAGGAGAAGGAGGGGAATTAATGTGGAAATGGAGATTGAAAAAGGGGGAAATTCCTGAAGGAAAATGGCTGGCAATGGGGAAATGTATGTGGTGGAGGTTCGATTGGTTGCTGAGAAAAAATGGGAGAGAAATTAGGGCTTTGTTAAACAAAATTTTCTAAAACAGAGAGAAACTGTGAAGAAGATGAAGAAGATGAACCAACGGTTCCAATGTCCAACCCCTTTTTGAAGGACTCTTCACAAATGATTCACGCGTTATTT

mRNA sequence

GTGCAATTAAAATAAATACTAGCCAAGATGAACACATGATTTATATATTAGAAAATAAATGAATAAATGGAAGGGAAAAAATGAACAAAAAAACATCCTTTGAAAGAGAAAACATGCAAATCTTACTGAGTTGAAAAACAAATTAATTAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAAAACATAATAATATTCTGTTGGTGGCCCGACCCGACCCGAACCGAACAATCAACAAAGTAATCACTATCCCCTTTCTTCCTCCTTCCGTCCCTTCCCTTTCCCCCAACAATAAAAAAATTCAAAATTACATGGAATATTCGAAAAAAATAAATAATAAAAATTTTAAACATTTTTAAATAATATGTATATATTCTCAACACGTGTCGATCCACAATACAAACACGTGGACAGATTGCACAAATAATCCATGCAACTTCGTGTGTAATTATCGAATCCTTCCTCTTCTGCCTTCATCTTCTTCTTCATCTTCTTCTTCAAGGTTTTATATACAGAACTCTAATGGAAAAACATCCTCTCTGTTTCTCTCTCTCTCATCCTCTGTTTTTTTTTTTTTTTTAATTTGGGAAATTGAAGGTTTGTGATTAAGTGAGAAAGATATATATATGTGTGTATATATATATCTATCATCAACCTAATGCACTAAATCCGCCTCCCTTCATCATTTGTTTAAACTCCTTATAATTCACCATTCCATCTCCATCCACATCCACTTTCATTATCATTTTCTTGCAATCCTCTACAGTTCTCCCTTGTTTAAGCCCCAAGGAAGCTAGAACTGACCTCAATTCGTCGACGGTGATGAATCCATCGCCATTTTGATCGAAGACATTGAAAGCTTCTCTCATATCCTCTTCCTCGTCTCGCTCGTCCATAATCGACTGATACAGCTCACCGAACTCATCAATGTCGACACATCCATCGCCATTGACGTCGATTTTCTCAATCATTTGAGTCAGATCTTTATCAGGAATGAAAATTCCCAAATTCTCCAAGGAGTCGCTTAGTTCCTTCTTGGTGATTCTGCCGTCGCCGTTGCGATCGAACATTTGGAATACTCTTCGTAGTTCCGTTGGATCCATTTGTAAAATGATTATATTATATACTGTGTTTGTGGATTGGATGAGAGATAAATCTCAGCCGGCCGGCGAAGGGCAGGAGGAGATTTGGAGTAGGTGAAAGAGAGAGAGAGGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGGAAATTAAAAAGCGATGAGGATGGGAGGAATGTGATTTAAGGGTTTAATGGAAAGAGAGAGAGAGGAGAAGGAGGGGAATTAATGTGGAAATGGAGATTGAAAAAGGGGGAAATTCCTGAAGGAAAATGGCTGGCAATGGGGAAATGTATGTGGTGGAGGTTCGATTGGTTGCTGAGAAAAAATGGGAGAGAAATTAGGGCTTTGTTAAACAAAATTTTCTAAAACAGAGAGAAACTGTGAAGAAGATGAAGAAGATGAACCAACGGTTCCAATGTCCAACCCCTTTTTGAAGGACTCTTCACAAATGATTCACGCGTTATTT

Coding sequence (CDS)

ATGAAAATTCCCAAATTCTCCAAGGAGTCGCTTAGTTCCTTCTTGGTGATTCTGCCGTCGCCGTTGCGATCGAACATTTGGAATACTCTTCGTAGTTCCGTTGGATCCATTTGTAAAATGATTATATTATATACTGTGTTTGTGGATTGGATGAGAGATAAATCTCAGCCGGCCGGCGAAGGGCAGGAGGAGATTTGGAGTAGGTGA

Protein sequence

MKIPKFSKESLSSFLVILPSPLRSNIWNTLRSSVGSICKMIILYTVFVDWMRDKSQPAGEGQEEIWSR
Homology
[Close]
BLAST of Cmc07g0202271 vs. ExPASy TrEMBL
Match: A0A7I8IQC8 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_05006559 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.8e-04
Identity = 27/47 (57.45%), Postives = 30/47 (63.83%), Query Frame = 0 

Query: 1   MKIPKFSKESLSSFLVILPSPLRSNIWNTLRSSVGSICKMIILYTVF 48
           M +P+F  ESLSS  VILPSPLRSNIWNT  SS  SI      +  F
Sbjct: 178 MWMPRFCSESLSSLFVILPSPLRSNIWNTRFSSAASIAGRRFFFCFF 224

The following BLAST results are available for this feature:
BLAST of Cmc07g0202271 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc07g0202271 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc07g0202271 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7I8IQC88.8e-0457.45Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_05006559 PE=4 SV... [more]
BLAST of Cmc07g0202271 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0202271.1Cmc07g0202271.1mRNA