Cmc07g0201681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0201681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 24051735 .. 24052551 (-)
RNA-Seq Expression	Cmc07g0201681
Synteny	Cmc07g0201681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATGGCTTCCAATAATGTTCTATGCAAACTAATAATGCTCATATTAGTTACCATCATCTTTGCCTCCAATAATGTTGCCACAAGAAACTTGCTTTCTATGTCTCATCTCGCTCGTAAGTTACTCTCTTTGTCACAATGAATCCTGATGTTTAAATCTGATATCTTTTCAGTCGATTTGAGATTATTTATTATTTATATAGAATATAGTATCAATCTATATACTCTTTTACTTCATATTTGATAAAAATTAGAATAGGAAAATGAAAAAAAAAAATAGGCTTAATTTTTAAAAAGAAAAATTCAATTACGAAATGTTTACCAAATAAGATCAAAGTAATTATAAAACGTAGCGTATAAAGAATTTGTTGTTGATTTTGAATAGATGTGAAGCATGATGAGATGAACAATACAAGTGTTCCTGCGCCCAATCCTCCAAAATCACCACCGGAAGATGGACCATGGGATGACCCTTGGGATGGAAACTTTTGAGGATAGCACCGACTCTCTTTCTTTTCTTTCTATTCTTTAAGCTAGATTTTCTATCTTGTTATTTCTATACAATTTTAAAAAAATTAAAAAAACTTAGGTGTAGTCCGGATGCATTCATCTTTTGTACATCCCAAAACATTTTCTTTCTCAAAATATGTATTTATATGATCAAAAGGTGGAAAGCATAGTGGTTAGGTGCAGGTTAGACCAGTTGTACTTAATCGTTGCTCGTTGAATGAAAATTTAAACTTCCAATGTTATGGATAAGTATAAATATACTTTTAATTGTTGTTAGTTCATGATGTGGTTGTTCAAAAATTTTATGT

mRNA sequence

GCTATGGCTTCCAATAATGTTCTATGCAAACTAATAATGCTCATATTAGTTACCATCATCTTTGCCTCCAATAATGTTGCCACAAGAAACTTGCTTTCTATGTCTCATCTCGCTCATGTGAAGCATGATGAGATGAACAATACAAGTGTTCCTGCGCCCAATCCTCCAAAATCACCACCGGAAGATGGACCATGGGATGACCCTTGGGATGGAAACTTTTGAGGATAGCACCGACTCTCTTTCTTTTCTTTCTATTCTTTAAGCTAGATTTTCTATCTTGTTATTTCTATACAATTTTAAAAAAATTAAAAAAACTTAGGTGTAGTCCGGATGCATTCATCTTTTGTACATCCCAAAACATTTTCTTTCTCAAAATATGTATTTATATGATCAAAAGGTGGAAAGCATAGTGGTTAGGTGCAGGTTAGACCAGTTGTACTTAATCGTTGCTCGTTGAATGAAAATTTAAACTTCCAATGTTATGGATAAGTATAAATATACTTTTAATTGTTGTTAGTTCATGATGTGGTTGTTCAAAAATTTTATGT

Coding sequence (CDS)

ATGGCTTCCAATAATGTTCTATGCAAACTAATAATGCTCATATTAGTTACCATCATCTTTGCCTCCAATAATGTTGCCACAAGAAACTTGCTTTCTATGTCTCATCTCGCTCATGTGAAGCATGATGAGATGAACAATACAAGTGTTCCTGCGCCCAATCCTCCAAAATCACCACCGGAAGATGGACCATGGGATGACCCTTGGGATGGAAACTTTTGA

Protein sequence

MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPEDGPWDDPWDGNF

Homology

[Close]

BLAST of Cmc07g0201681 vs. NCBI nr
Match: KAA0044642.1 (hypothetical protein E6C27_scaffold46G003970 [Cucumis melo var. makuwa] >TYK16946.1 hypothetical protein E5676_scaffold130G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 144.4 bits (363), Expect = 3.7e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE 60
          MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE
Sbjct: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE 60

Query: 61 DGPWDDPWDGNF 73
          DGPWDDPWDGNF
Sbjct: 61 DGPWDDPWDGNF 72

[Close]

BLAST of Cmc07g0201681 vs. NCBI nr
Match: KAE8649132.1 (hypothetical protein Csa_015133 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 2.7e-13
Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE 60
          MAS+N LCKLIMLILVTI+FASNN ATRNLLSM HLAHV HDEM N+       P +PP+
Sbjct: 1  MASSNALCKLIMLILVTILFASNNFATRNLLSMPHLAHVNHDEMTNS-------PPTPPK 57

Query: 61 DGPW 65
          DGPW
Sbjct: 61 DGPW 57

[Close]

BLAST of Cmc07g0201681 vs. NCBI nr
Match: KAE8649133.1 (hypothetical protein Csa_014439, partial [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 50/71 (70.42%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE 60
          MASNNVLCKLIMLILVTIIFASNNVATRNLLSM HLA+VK DE+NN           PP+
Sbjct: 41 MASNNVLCKLIMLILVTIIFASNNVATRNLLSMPHLANVKRDEINN-----------PPQ 99

Query: 61 DGPWDDPWDGN 72
              D+PWDGN
Sbjct: 101 TAD-DEPWDGN 99

[Close]

BLAST of Cmc07g0201681 vs. NCBI nr
Match: KAG6600182.1 (hypothetical protein SDJN03_05415, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 78.6 bits (192), Expect = 2.5e-11
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 7  LCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPEDGPWDD 66
          LCKL  ++++TII  SNNVA RNLL +    HVK DEMNNT+V  PNPP+S P DGPWD 
Sbjct: 11 LCKL--MLVLTIILPSNNVAARNLLDVPRFTHVKRDEMNNTNVGVPNPPQS-PGDGPWDI 70

Query: 67 PWDGN 72
          PWDGN
Sbjct: 71 PWDGN 72

[Close]

BLAST of Cmc07g0201681 vs. ExPASy TrEMBL
Match: A0A5A7TMV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00830 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE 60
          MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE
Sbjct: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE 60

Query: 61 DGPWDDPWDGNF 73
          DGPWDDPWDGNF
Sbjct: 61 DGPWDDPWDGNF 72

[Close]

BLAST of Cmc07g0201681 vs. ExPASy TrEMBL
Match: A0A0A0KZ52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022280 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.4e-13
Identity = 50/71 (70.42%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMSHLAHVKHDEMNNTSVPAPNPPKSPPE 60
          MASNNVLCKLIMLILVTIIFASNNVATRNLLSM HLA+VK DE+NN           PP+
Sbjct: 1  MASNNVLCKLIMLILVTIIFASNNVATRNLLSMPHLANVKRDEINN-----------PPQ 59

Query: 61 DGPWDDPWDGN 72
              D+PWDGN
Sbjct: 61 TAD-DEPWDGN 59

The following BLAST results are available for this feature:

BLAST of Cmc07g0201681 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044642.1	3.7e-31	100.00	hypothetical protein E6C27_scaffold46G003970 [Cucumis melo var. makuwa] >TYK1694...	[more]
KAE8649132.1	2.7e-13	71.88	hypothetical protein Csa_015133 [Cucumis sativus]	[more]
KAE8649133.1	1.7e-12	70.42	hypothetical protein Csa_014439, partial [Cucumis sativus]	[more]
KAG6600182.1	2.5e-11	64.62	hypothetical protein SDJN03_05415, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc07g0201681 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0201681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMV8	1.8e-31	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KZ52	8.4e-13	70.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022280 PE=4 SV=1	[more]

BLAST of Cmc07g0201681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0201681.1	Cmc07g0201681.1	mRNA