Cmc07g0201301 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0201301
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	zinc finger CCCH domain-containing protein 54
Location	CMiso1.1chr07: 23759785 .. 23760297 (+)
RNA-Seq Expression	Cmc07g0201301
Synteny	Cmc07g0201301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTTTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

mRNA sequence

ATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTTTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

Coding sequence (CDS)

ATGTACTCTTACAAGATCCAACGGTGCCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTATGCACACCGTGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACTGCTGTGGCCTGCCCGGCTTTTCGATCGGGGAGCTGTCCGAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTATTGGCTTCACCCGGCTCGGTACCGGACCCGGGCCTGTAATGCCGGCCGATTTTGTCAAAGGAAAGTTTGTTTTTTTGCTCACTCGCCGGAGGAACTCCGGCCTGAAACCAAACACAAGTTTAATTTGAATGCTCAACGGCAGCGTGTGGCGGTGGCTGCCGTTGAAAGTCCGCCGGAGGAAAAGAATGACGGAATTTTGGAAATCCCCGCGAGGGAGAACGGCGGTGGACGGAAAAATGAACGGAGTTTTGGATTTGATGTGTCGGAATTGGAGTTGCCGCATATTGAATGGATATCGGAATTGTTGAAGTAA

Protein sequence

MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK

Homology

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BLAST of Cmc07g0201301 vs. NCBI nr
Match: XP_008454474.1 (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044676.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa] >TYK16906.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa])

HSP 1 Score: 369.4 bits (947), Expect = 1.7e-98
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF
Sbjct: 47  MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 106

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA
Sbjct: 107 AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 166

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 167 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of Cmc07g0201301 vs. NCBI nr
Match: KGN53171.2 (hypothetical protein Csa_015342 [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 155/170 (91.18%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPR+FNYTAVACPAFRSGSCPKGDFCEF
Sbjct: 90  MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRQFNYTAVACPAFRSGSCPKGDFCEF 149

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A +QRVAV A
Sbjct: 150 AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKQKSSFSAHQQRVAVDA 209

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           +ESPPEEKNDGILEIPAR +G GRKNERSFG DV+ELELPHIEWISELLK
Sbjct: 210 IESPPEEKNDGILEIPARVSGSGRKNERSFGLDVTELELPHIEWISELLK 259

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BLAST of Cmc07g0201301 vs. NCBI nr
Match: XP_038878131.1 (zinc finger CCCH domain-containing protein 54 [Benincasa hispida])

HSP 1 Score: 326.2 bits (835), Expect = 1.6e-85
Identity = 148/170 (87.06%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY+YKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF
Sbjct: 38  MYAYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 97

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSP+ELRPETK KFN NA RQRVAVA 
Sbjct: 98  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPKELRPETKQKFNFNAHRQRVAVAD 157

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           VESP EEK DG  EIP R   GGR+ +RSFG +VSEL+LPH+EWISELL+
Sbjct: 158 VESPSEEKFDGASEIPVRGTSGGREKQRSFGLEVSELDLPHVEWISELLQ 207

[Close]

BLAST of Cmc07g0201301 vs. NCBI nr
Match: XP_023553083.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 6.8e-76
Identity = 133/170 (78.24%), Postives = 148/170 (87.06%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY++KIQRCP++RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEF
Sbjct: 49  MYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEF 108

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   RVA+AA
Sbjct: 109 AHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARVALAA 168

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           +E P E KNDG+ EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 169 LEYPVERKNDGVSEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

[Close]

BLAST of Cmc07g0201301 vs. NCBI nr
Match: XP_022922815.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita moschata])

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 132/170 (77.65%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY++KIQRCP++RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEF
Sbjct: 49  MYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEF 108

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA
Sbjct: 109 AHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAA 168

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           +E P E KNDG+ EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 169 LEYPVERKNDGVSEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

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BLAST of Cmc07g0201301 vs. ExPASy Swiss-Prot
Match: O65036 (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN=TZF6 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.9e-51
Identity = 87/107 (81.31%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR+G+C +GD CEF
Sbjct: 55  MYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGACHRGDSCEF 114

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-PETKHK 107
           AHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR  E KH+
Sbjct: 115 AHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHR 161

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BLAST of Cmc07g0201301 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-41
Identity = 70/100 (70.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C KGD CEF
Sbjct: 82  MYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEF 141

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 101
           AHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 142 AHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

[Close]

BLAST of Cmc07g0201301 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.3e-41
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY +K++RC R RSHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C +GD CEF
Sbjct: 81  MYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEF 140

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 101
           +HGVFE WLHPARYRT+ C  G  C+R+VCFFAHSP+++R
Sbjct: 141 SHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 180

[Close]

BLAST of Cmc07g0201301 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-41
Identity = 76/134 (56.72%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY +K++RC R RSHDWTECP+AH GEKA+RRDPRR+ Y+  ACP FR G C +GD CEF
Sbjct: 80  MYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGGCKRGDACEF 139

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR---PETKHKFNLNAQRQRVA 120
           AHGVFE WLHPARYRT+ C  G  C+R+VCFFAH+P++LR   P  +   N         
Sbjct: 140 AHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQGSNSPRGCGGGG 199

Query: 121 VAAVESPPEEKNDG 132
             A  SP  E  DG
Sbjct: 200 AGAAASPLAESYDG 213

[Close]

BLAST of Cmc07g0201301 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 66/100 (66.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY +K++RC R RSHDWTECP+AH GEKA+RRDPR+++Y+  ACP FR G C +GD CE+
Sbjct: 79  MYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEY 138

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 101
           AHGVFE WLHPARYRT+ C  G  C+R+VCFFAH+P++LR
Sbjct: 139 AHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLR 178

[Close]

BLAST of Cmc07g0201301 vs. ExPASy TrEMBL
Match: A0A5A7TRB5 (Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00410 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.1e-99
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF
Sbjct: 47  MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 106

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA
Sbjct: 107 AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 166

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 167 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

[Close]

BLAST of Cmc07g0201301 vs. ExPASy TrEMBL
Match: A0A1S3BYP8 (zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC103494870 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.1e-99
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF
Sbjct: 47  MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 106

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA
Sbjct: 107 AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 166

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK
Sbjct: 167 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

[Close]

BLAST of Cmc07g0201301 vs. ExPASy TrEMBL
Match: A0A6J1E9W0 (zinc finger CCCH domain-containing protein 54 OS=Cucurbita moschata OX=3662 GN=LOC111430684 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.6e-76
Identity = 132/170 (77.65%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY++KIQRCP++RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEF
Sbjct: 49  MYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEF 108

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAHSPEELRPETK K + +A   R A+AA
Sbjct: 109 AHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAA 168

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           +E P E KNDG+ EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 169 LEYPVERKNDGVSEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

[Close]

BLAST of Cmc07g0201301 vs. ExPASy TrEMBL
Match: A0A6J1JDT4 (zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC111483496 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 131/170 (77.06%), Postives = 148/170 (87.06%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY++KIQRCP++RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEF
Sbjct: 49  MYAFKIQRCPKSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEF 108

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAHSPEELRPETK+K +  A  +R A+AA
Sbjct: 109 AHGVFEFWLHPTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKNKLHFAAPVERAALAA 168

Query: 121 VESPPEEKNDGILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 171
           ++ P E KNDG+ EIP +E   G  NERS   + SE ELPHIEWISELL+
Sbjct: 169 LKYPVERKNDGVSEIPVKEISDGLGNERSSELEASESELPHIEWISELLQ 218

[Close]

BLAST of Cmc07g0201301 vs. ExPASy TrEMBL
Match: A0A6J1CHL2 (zinc finger CCCH domain-containing protein 54 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011570 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.2e-71
Identity = 127/176 (72.16%), Postives = 146/176 (82.95%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           M++YKIQRCPR RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE+
Sbjct: 18  MFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEY 77

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAA 120
           AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V A
Sbjct: 78  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVA 137

Query: 121 VESPPEEKNDGILEIPARENG------GGRKNERSFGFDVSELELPHIEWISELLK 171
           VE+P E KND +  I     G        RKN+R+FG++VS+ +LPHI WI ELL+
Sbjct: 138 VEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWIRELLQ 193

[Close]

BLAST of Cmc07g0201301 vs. TAIR 10
Match: AT5G07500.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 201.4 bits (511), Expect = 5.6e-52
Identity = 87/107 (81.31%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR+G+C +GD CEF
Sbjct: 55  MYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGACHRGDSCEF 114

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-PETKHK 107
           AHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR  E KH+
Sbjct: 115 AHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHR 161

[Close]

BLAST of Cmc07g0201301 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 171.0 bits (432), Expect = 8.1e-43
Identity = 70/100 (70.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C KGD CEF
Sbjct: 82  MYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEF 141

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 101
           AHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 142 AHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

[Close]

BLAST of Cmc07g0201301 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-42
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           MY +K++RC R RSHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C +GD CEF
Sbjct: 81  MYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEF 140

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 101
           +HGVFE WLHPARYRT+ C  G  C+R+VCFFAHSP+++R
Sbjct: 141 SHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 180

[Close]

BLAST of Cmc07g0201301 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.6e-41
Identity = 80/158 (50.63%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           +Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF
Sbjct: 93  IYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEF 152

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PETKHKFNLNAQR 120
           +HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+      L    
Sbjct: 153 SHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP 212

Query: 121 QRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 144
             + V+   SPP E      + G L    R+   NGGG
Sbjct: 213 TSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

[Close]

BLAST of Cmc07g0201301 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.6e-41
Identity = 80/158 (50.63%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 1   MYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEF 60
           +Y +KI+RC R RSHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF
Sbjct: 93  IYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEF 152

Query: 61  AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR-------PETKHKFNLNAQR 120
           +HGVFE WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR       P+      L    
Sbjct: 153 SHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP 212

Query: 121 QRVAVAAVESPPEEK-----NDGILEIPARE---NGGG 144
             + V+   SPP E      + G L    R+   NGGG
Sbjct: 213 TSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250

The following BLAST results are available for this feature:

BLAST of Cmc07g0201301 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454474.1	1.7e-98	100.00	PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044...	[more]
KGN53171.2	1.4e-89	91.18	hypothetical protein Csa_015342 [Cucumis sativus]	[more]
XP_038878131.1	1.6e-85	87.06	zinc finger CCCH domain-containing protein 54 [Benincasa hispida]	[more]
XP_023553083.1	6.8e-76	78.24	zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo]	[more]
XP_022922815.1	2.0e-75	77.65	zinc finger CCCH domain-containing protein 54 [Cucurbita moschata]	[more]

BLAST of Cmc07g0201301 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65036	7.9e-51	81.31	Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	1.1e-41	70.00	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82199	3.3e-41	68.00	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6L4N4	9.7e-41	56.72	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FU27	1.7e-40	66.00	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Cmc07g0201301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRB5	8.1e-99	100.00	Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BYP8	8.1e-99	100.00	zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1E9W0	9.6e-76	77.65	zinc finger CCCH domain-containing protein 54 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JDT4	1.6e-75	77.06	zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CHL2	4.2e-71	72.16	zinc finger CCCH domain-containing protein 54 isoform X2 OS=Momordica charantia ...	[more]

BLAST of Cmc07g0201301 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07500.1	5.6e-52	81.31	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	8.1e-43	70.00	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G19810.1	2.4e-42	68.00	CCCH-type zinc finger family protein	[more]
AT2G25900.1	2.6e-41	50.63	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	2.6e-41	50.63	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 73..96 e-value: 13.0 score: 7.5 coord: 38..64 e-value: 1.2E-5 score: 34.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 42..63 e-value: 8.4E-6 score: 25.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 38..65 score: 13.196945
None	No IPR available	GENE3D	3.30.1370.210		coord: 38..102 e-value: 2.7E-8 score: 35.8
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 1..121
None	No IPR available	PANTHER	PTHR14493:SF109	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54	coord: 1..121
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 37..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0201301.1	Cmc07g0201301.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0006349	regulation of gene expression by genetic imprinting
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031490	chromatin DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding