Cmc07g0201131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0201131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Mediator of RNA polymerase II transcription subunit 31
Location	CMiso1.1chr07: 23645455 .. 23648602 (+)
RNA-Seq Expression	Cmc07g0201131
Synteny	Cmc07g0201131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAGCGATTGAAAAGGATTATGAGGTTTTGATAGCATTGTTAGCGCGGGCATATTTCATTGTTCTACGTCGGGTCATCGATTTCTATCGCTTGCTGCTCTAAGTTGAATATAGCCTTTGTTGAGAGCTTTGAAGAATATCTCCATATCGCTCCACTACGAATCTCGTAACTTCTTCTTAATTTTTGGGTTCAATTTGAACTTCTATTGCACGATATTTGAACTTCGACTGGCACCCAGATTCAATGGCGTCCAATCATGGATTAAACGAAGAAGCAGCTGATAACCCATCATCGTAAGTTTGTTTCTTATTTTCTTTCTCCTGTTCTATCATTTTCCCTCCTTCTTCGTCTCCCTTTACCCAACCCTTCTTTCATTTTGTATATCGCTTTAATTCTTCATTTTTGCTCTGTTGCTGAGGGATTGATTTATCGGGCTCATCGTGAATCGATCAATTTTCCCTTTCTGTTTGGTCAATTATTACCAGGCCTACAAATGTTTACAAAGATCCCGATGACGGACGGCAGCGGTTCTTGCTCGAATTGGAGTTTGTTCAATGCCTTGCCAATCCTACCTACATTCATTGTAAGTTTTTGTAAAATTTAGGGTTTCTTTATAGGGGTTAGGCTTATTTCTTATGCTTGAAACTTCAGCTTGAAGGGTAGGCCAAGCTATTGGATGTTCGAAGTTTCGAAAATTCAGCGTTTATCCTAAGATTTGCTTTCGGACCATTTCAGTTGAATTTATATTCAATTTGGATTTCTAATGAGCTAACTATACATGAAAGTGTGCTTTACATGTAAAGCAACCAATACGAAAGTAAATTCTACGTATTTCTTCTAATGATAAAGTGGATTGAACTTATGTGTATAATAAATGTCATTGTAAAATTAAATAATCACTTTGGAGTGAGTTCAAGCTAGGACGAACATTTACCAATGATTTAATACCGTATGAGTTTTCTTGATATCAATATCAATATAGTATTGTTATAGTTGTTCCATTCAATTAGTTGAGGTCTAACAAGCTAGCTTGAACATCCAGGGTGTGAAAGAAAAAGAACTGGTTGCTTGAATTTTTATCATATAATATCTCACGTGAACCATGTGTTTTATTTAAATTTGAACATGATTTTCTTGGTTGCATTTTCCTGTGAAGGTGTGATTTTTTATTGACCAGTGTGAAGAAGGAAGTCACAATTAAAGATCAGATTTTGACATCTAGAACCAAAGTTCATTCTATTGCATGACATCTTCTTGAGTTAGAGTAGTGCCTAGATGAAACTTTTTCTTTTATGTTAACCACCTGACTACTGCTGGTGCAGCGACCTACTGTTCCTACTACAAAATCAACTTATAAGTTACCAGAGATCAGTGCACGTCTGATCTTTTTCTGCCTGTTAAGAAAAGCTGGCGTTGTACAATTCTTACATATAGTGAATTTCCTAGAATTTTATCCTTTTGATGATATGCTACATTATCTTACTGAAGTACATTTCCGAAGTTGGCACTTACATTTTTTATGATAGTCATCTTCACCTTCACGTACACATTTCTTCTTAACAAACGATGTATTTGCAAATTGATATTGAAATGTTGGAACAAATGCTTTTTGTGCTCTCAGTTTTGGTTGCTGATCATCTAGTTTTATACAGATCTGGCACAGAATCGTTACCTCGAGGATGAAGCTTTTATTGGTTACTTGAAGTACCTTCAATATTGGCAACGGCCAGAGTATATCAAGTTTATAATGTGAGTCGGTTCTTTCCCTGAACTGATGAATGAGAACTGATTGTTCTTTTGGTATTGACTTCAATGTTGTTTCTAGGTACCCCCATTGTCTTTTTTTTCTTGAACTTCTACAAAATTCAAACTTCCGAAATGCAATGGCTCATCCTGGCAACAAGGTTAGCTTCTGTTCTTTTTTGTTCAACTTCTCTTTCGAGATCGGAGAATAAATATTTAGTTGGATAGTGATTTTTTTCTGTGCTCGCGACTATGCACATCTCTGATAAATGCCCAGTAGACTCGTATGTTCGTTTCAGTTTATACTGAGATGAGAAAAATCTAAACTGTCTCCCATGTCCATCGATTCAAGAGAGATATCTGTTGCTTCTTTCCAAATGGTTTGCTCATATGCAGATAGCGATATTTCCCCTTTTCCTTTTTCTTAGTATTTTAACGCAGTTGCATCATTTGGAATTTCTTAGGAATTGGCACACAGACAACAATTTTACTTCTGGAAGAACTATAGGAATAATCGATTGAAACACATTTTGCCTCGACCTCTTCCCGAACCTGCAGCATTACCACCCCCAGTATCCGCCCCACCTCAAGCACCTGTACCGGCCCCAACCCCAGCCCCCACTGTGGCAGCTTCACCTGCTACAGCTGCACTTTCTCCCATGCAGTATGGTATTCCACCTGGTCCTGGACTTCCAAAGAACGACATGAAGGGCGCAGGAATTGATCGACGAAAGAGAAAACATGTAACGTGTCACATATCATTTGTTTTCTCAAGTTATCGATGTACTCTACTTATTAGGTTAGAAGACACACCTCTTCCTTAAACCTTCAAATTTTCATTTACTTCTTTTGTGTGTTTGACAGGAAAGAAGTATGACGTAGTTGGTTTCATTAGTCAAAACTAGGGTGGATGCTGGAGCAGCTCACGAGGTAAATATGCATACAGTGAAAATTAAAGTTCAAAGATGATGCCTTGCATAAGCTTTCCAAGAGTTATCCTTCACTTCGGGTTGTGCAAAATCTCTCTCTCGCATGTTCGCGAACAGAGCGACATGACCTCCACGTTCGTATAAAGTATTGCTAAGAATTCTTAAAATTTTTGGTTTATCTATATGTTTGGCTGTTATGGCTATCTATACATTGGTAAGCAGTTCCTTTGACTATCCTTTTATCTCCATCTATATTAGACAATTTTTTGTAGCAGCGTAAAATCCTATGAGTAGGCATGGTGAGAAGTGAGCAGTAATGTGGATATAGCCAGATATATCGTTTATAAATAGTGACATTTTGTTATATTTGTAAATACTTTTGCAATTTGTTATTAAATTTTTTTTTTTATGTTTTATTGATTATGATATGTAAGAATATGTATTAATAGTTCAAGTTTATGTCAATGTTGACG

mRNA sequence

TTTTAAGCGATTGAAAAGGATTATGAGGTTTTGATAGCATTGTTAGCGCGGGCATATTTCATTGTTCTACGTCGGGTCATCGATTTCTATCGCTTGCTGCTCTAAGTTGAATATAGCCTTTGTTGAGAGCTTTGAAGAATATCTCCATATCGCTCCACTACGAATCTCGTAACTTCTTCTTAATTTTTGGGTTCAATTTGAACTTCTATTGCACGATATTTGAACTTCGACTGGCACCCAGATTCAATGGCGTCCAATCATGGATTAAACGAAGAAGCAGCTGATAACCCATCATCGCCTACAAATGTTTACAAAGATCCCGATGACGGACGGCAGCGGTTCTTGCTCGAATTGGAGTTTGTTCAATGCCTTGCCAATCCTACCTACATTCATTATCTGGCACAGAATCGTTACCTCGAGGATGAAGCTTTTATTGGTTACTTGAAGTACCTTCAATATTGGCAACGGCCAGAGTATATCAAGTTTATAATGTACCCCCATTGTCTTTTTTTTCTTGAACTTCTACAAAATTCAAACTTCCGAAATGCAATGGCTCATCCTGGCAACAAGGAATTGGCACACAGACAACAATTTTACTTCTGGAAGAACTATAGGAATAATCGATTGAAACACATTTTGCCTCGACCTCTTCCCGAACCTGCAGCATTACCACCCCCAGTATCCGCCCCACCTCAAGCACCTGTACCGGCCCCAACCCCAGCCCCCACTGTGGCAGCTTCACCTGCTACAGCTGCACTTTCTCCCATGCAGTATGGTATTCCACCTGGTCCTGGACTTCCAAAGAACGACATGAAGGGCGCAGGAATTGATCGACGAAAGAGAAAACATGAAAGAAGTATGACGTAGTTGGTTTCATTAGTCAAAACTAGGGTGGATGCTGGAGCAGCTCACGAGGTAAATATGCATACAGTGAAAATTAAAGTTCAAAGATGATGCCTTGCATAAGCTTTCCAAGAGTTATCCTTCACTTCGGGTTGTGCAAAATCTCTCTCTCGCATGTTCGCGAACAGAGCGACATGACCTCCACGTTCGTATAAAGTATTGCTAAGAATTCTTAAAATTTTTGGTTTATCTATATGTTTGGCTGTTATGGCTATCTATACATTGGTAAGCAGTTCCTTTGACTATCCTTTTATCTCCATCTATATTAGACAATTTTTTGTAGCAGCGTAAAATCCTATGAGTAGGCATGGTGAGAAGTGAGCAGTAATGTGGATATAGCCAGATATATCGTTTATAAATAGTGACATTTTGTTATATTTGTAAATACTTTTGCAATTTGTTATTAAATTTTTTTTTTTATGTTTTATTGATTATGATATGTAAGAATATGTATTAATAGTTCAAGTTTATGTCAATGTTGACG

Coding sequence (CDS)

ATGGCGTCCAATCATGGATTAAACGAAGAAGCAGCTGATAACCCATCATCGCCTACAAATGTTTACAAAGATCCCGATGACGGACGGCAGCGGTTCTTGCTCGAATTGGAGTTTGTTCAATGCCTTGCCAATCCTACCTACATTCATTATCTGGCACAGAATCGTTACCTCGAGGATGAAGCTTTTATTGGTTACTTGAAGTACCTTCAATATTGGCAACGGCCAGAGTATATCAAGTTTATAATGTACCCCCATTGTCTTTTTTTTCTTGAACTTCTACAAAATTCAAACTTCCGAAATGCAATGGCTCATCCTGGCAACAAGGAATTGGCACACAGACAACAATTTTACTTCTGGAAGAACTATAGGAATAATCGATTGAAACACATTTTGCCTCGACCTCTTCCCGAACCTGCAGCATTACCACCCCCAGTATCCGCCCCACCTCAAGCACCTGTACCGGCCCCAACCCCAGCCCCCACTGTGGCAGCTTCACCTGCTACAGCTGCACTTTCTCCCATGCAGTATGGTATTCCACCTGGTCCTGGACTTCCAAAGAACGACATGAAGGGCGCAGGAATTGATCGACGAAAGAGAAAACATGAAAGAAGTATGACGTAG

Protein sequence

MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPPGPGLPKNDMKGAGIDRRKRKHERSMT

Homology

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BLAST of Cmc07g0201131 vs. NCBI nr
Match: XP_008453845.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 31 [Cucumis melo] >KAA0044690.1 mediator of RNA polymerase II transcription subunit 31 [Cucumis melo var. makuwa] >TYK16894.1 mediator of RNA polymerase II transcription subunit 31 [Cucumis melo var. makuwa])

HSP 1 Score: 417.2 bits (1071), Expect = 8.5e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180

Query: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 207
           GPGLPKNDMKGAGIDRRKRKHERSMT
Sbjct: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 206

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BLAST of Cmc07g0201131 vs. NCBI nr
Match: XP_004146891.1 (mediator of RNA polymerase II transcription subunit 31 [Cucumis sativus] >KGN53186.1 hypothetical protein Csa_014598 [Cucumis sativus])

HSP 1 Score: 397.1 bits (1019), Expect = 9.1e-107
Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNHGL EE ADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNHGLKEEEADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEPAALPPPV+APPQA VPAPT AP +AASPA  ALSP+QYGIPP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVTAPPQAAVPAPTSAPNMAASPAAPALSPIQYGIPP 180

Query: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 207
           GPGLPKNDMKGAGIDRRKRKHERSMT
Sbjct: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 206

[Close]

BLAST of Cmc07g0201131 vs. NCBI nr
Match: XP_038880162.1 (mediator of RNA polymerase II transcription subunit 31 [Benincasa hispida])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 195/206 (94.66%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASN GLNEEAA NPSSPT+VYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNPGLNEEAAGNPSSPTSVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPA-TAALSPMQYGIP 180
           NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPA  PAP +AASPA T ALSPMQYGIP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPA--PAPAMAASPAGTPALSPMQYGIP 180

Query: 181 PGPGLPKNDMKGAGIDRRKRKHERSM 206
           PG GLPKNDMK AGIDRRKRKHERSM
Sbjct: 181 PGSGLPKNDMKSAGIDRRKRKHERSM 204

[Close]

BLAST of Cmc07g0201131 vs. NCBI nr
Match: XP_022141008.1 (mediator of RNA polymerase II transcription subunit 31 [Momordica charantia])

HSP 1 Score: 367.5 bits (942), Expect = 7.7e-98
Identity = 189/208 (90.87%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNHGLNEEA+DNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRY EDE
Sbjct: 1   MASNHGLNEEASDNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPH LFFLELLQN+NFRNAMAHP NKEL+HRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHSLFFLELLQNANFRNAMAHPANKELSHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATA-ALSPMQYGIP 180
           NYRNNRLKHILPRPLPEPAALPPPVS PPQAPVPA T AP +AASP  A ALSPMQYGIP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVSVPPQAPVPAAT-APGMAASPVGAPALSPMQYGIP 180

Query: 181 PGPGLPKNDMKGAGIDRRKRK-HERSMT 207
           PG GL KNDMK  GIDRRKRK HERSMT
Sbjct: 181 PGSGLAKNDMKSGGIDRRKRKQHERSMT 207

[Close]

BLAST of Cmc07g0201131 vs. NCBI nr
Match: XP_022984406.1 (mediator of RNA polymerase II transcription subunit 31-like [Cucurbita maxima])

HSP 1 Score: 364.4 bits (934), Expect = 6.5e-97
Identity = 182/205 (88.78%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNH LNEEA DNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNHELNEEADDNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQ+PEYIK+IMYPHCLFFLELLQN+NFRNAMAHP NKEL HRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRNAMAHPANKELTHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEPAA PP VS PPQAPV A  PAP +AASPA   LSPMQYG+PP
Sbjct: 121 NYRNNRLKHILPRPLPEPAAQPPAVSGPPQAPVSA--PAPAMAASPAGTPLSPMQYGVPP 180

Query: 181 GPGLPKNDMKGAGIDRRKRKHERSM 206
           G G+ KNDMK AGIDRRKRKHERSM
Sbjct: 181 GSGISKNDMKNAGIDRRKRKHERSM 203

[Close]

BLAST of Cmc07g0201131 vs. ExPASy Swiss-Prot
Match: Q8VYB1 (Mediator of RNA polymerase II transcription subunit 31 OS=Arabidopsis thaliana OX=3702 GN=MED31 PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.9e-73
Identity = 148/203 (72.91%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MAS   + ++A++ PS P N YKDPD GRQRFLLELEF+QCLANPTYIHYLAQNRY EDE
Sbjct: 1   MASPEEMGDDASEIPSPPKNTYKDPDGGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCL+FLELLQN NFR AMAHP NKELAHRQQFY+WK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNPNFRTAMAHPANKELAHRQQFYYWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEP    PPV+  P   +P P P+ T A SP   ALSPMQY    
Sbjct: 121 NYRNNRLKHILPRPLPEPVPPQPPVA--PSTSLP-PAPSATAALSP---ALSPMQY---- 180

Query: 181 GPGLPKND---MKGAGIDRRKRK 201
              L KND   M   GIDRRKRK
Sbjct: 181 NNMLSKNDTRNMGATGIDRRKRK 193

[Close]

BLAST of Cmc07g0201131 vs. ExPASy Swiss-Prot
Match: Q54NI7 (Putative mediator of RNA polymerase II transcription subunit 31 OS=Dictyostelium discoideum OX=44689 GN=med31 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 31  RFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLFFL 90
           RF++ELEF+QCL+NP Y++YLAQNRY +D+AF+ YL YLQYW++PEY KFI+YP  L+FL
Sbjct: 55  RFIMELEFIQCLSNPRYLNYLAQNRYFQDKAFVNYLVYLQYWKKPEYAKFIVYPQSLYFL 114

Query: 91  ELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRL 128
           +LLQ   FR  + H  + +  H QQFY W+ YRNNR+
Sbjct: 115 DLLQEERFRQELNHSQSTDFIHEQQFYHWQYYRNNRM 151

[Close]

BLAST of Cmc07g0201131 vs. ExPASy Swiss-Prot
Match: A0JNN3 (Mediator of RNA polymerase II transcription subunit 31 OS=Bos taurus OX=9913 GN=MED31 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.4e-24
Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 24  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMY 83
           D    R RF LELEFVQCLANP Y+++LAQ  Y +D+AF+ YLKYL YW+ PEY K++ Y
Sbjct: 10  DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKY 69

Query: 84  PHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLK 129
           P CL  LELLQ  +FR  + +    +    QQ   W++Y   R++
Sbjct: 70  PQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114

[Close]

BLAST of Cmc07g0201131 vs. ExPASy Swiss-Prot
Match: Q9CXU1 (Mediator of RNA polymerase II transcription subunit 31 OS=Mus musculus OX=10090 GN=Med31 PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 4.5e-24
Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 24  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMY 83
           D    R RF LELEFVQCLANP Y+++LAQ  Y +D+AF+ YLKYL YW+ PEY K++ Y
Sbjct: 10  DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKY 69

Query: 84  PHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLK 129
           P CL  LELLQ  +FR  + +    +    QQ   W++Y   R++
Sbjct: 70  PQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 114

[Close]

BLAST of Cmc07g0201131 vs. ExPASy Swiss-Prot
Match: Q9Y3C7 (Mediator of RNA polymerase II transcription subunit 31 OS=Homo sapiens OX=9606 GN=MED31 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24
Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 24  DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMY 83
           D    R RF LELEFVQCLANP Y+++LAQ  Y +D+AF+ YLKYL YW+ PEY K++ Y
Sbjct: 10  DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKDPEYAKYLKY 69

Query: 84  PHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLK 129
           P CL  LELLQ  +FR  + +    +    QQ   W++Y   R++
Sbjct: 70  PQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114

[Close]

BLAST of Cmc07g0201131 vs. ExPASy TrEMBL
Match: A0A5D3D0Y1 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00280 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.1e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180

Query: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 207
           GPGLPKNDMKGAGIDRRKRKHERSMT
Sbjct: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 206

[Close]

BLAST of Cmc07g0201131 vs. ExPASy TrEMBL
Match: A0A1S3BY12 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis melo OX=3656 GN=LOC103494449 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.1e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180

Query: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 207
           GPGLPKNDMKGAGIDRRKRKHERSMT
Sbjct: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 206

[Close]

BLAST of Cmc07g0201131 vs. ExPASy TrEMBL
Match: A0A0A0KZ88 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis sativus OX=3659 GN=Csa_4G025160 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.4e-107
Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNHGL EE ADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNHGLKEEEADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEPAALPPPV+APPQA VPAPT AP +AASPA  ALSP+QYGIPP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVTAPPQAAVPAPTSAPNMAASPAAPALSPIQYGIPP 180

Query: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 207
           GPGLPKNDMKGAGIDRRKRKHERSMT
Sbjct: 181 GPGLPKNDMKGAGIDRRKRKHERSMT 206

[Close]

BLAST of Cmc07g0201131 vs. ExPASy TrEMBL
Match: A0A6J1CJB2 (Mediator of RNA polymerase II transcription subunit 31 OS=Momordica charantia OX=3673 GN=LOC111011520 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.7e-98
Identity = 189/208 (90.87%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNHGLNEEA+DNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRY EDE
Sbjct: 1   MASNHGLNEEASDNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPH LFFLELLQN+NFRNAMAHP NKEL+HRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHSLFFLELLQNANFRNAMAHPANKELSHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATA-ALSPMQYGIP 180
           NYRNNRLKHILPRPLPEPAALPPPVS PPQAPVPA T AP +AASP  A ALSPMQYGIP
Sbjct: 121 NYRNNRLKHILPRPLPEPAALPPPVSVPPQAPVPAAT-APGMAASPVGAPALSPMQYGIP 180

Query: 181 PGPGLPKNDMKGAGIDRRKRK-HERSMT 207
           PG GL KNDMK  GIDRRKRK HERSMT
Sbjct: 181 PGSGLAKNDMKSGGIDRRKRKQHERSMT 207

[Close]

BLAST of Cmc07g0201131 vs. ExPASy TrEMBL
Match: A0A6J1J551 (Mediator of RNA polymerase II transcription subunit 31 OS=Cucurbita maxima OX=3661 GN=LOC111482713 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.2e-97
Identity = 182/205 (88.78%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MASNH LNEEA DNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE
Sbjct: 1   MASNHELNEEADDNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQ+PEYIK+IMYPHCLFFLELLQN+NFRNAMAHP NKEL HRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQQPEYIKYIMYPHCLFFLELLQNANFRNAMAHPANKELTHRQQFYFWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEPAA PP VS PPQAPV A  PAP +AASPA   LSPMQYG+PP
Sbjct: 121 NYRNNRLKHILPRPLPEPAAQPPAVSGPPQAPVSA--PAPAMAASPAGTPLSPMQYGVPP 180

Query: 181 GPGLPKNDMKGAGIDRRKRKHERSM 206
           G G+ KNDMK AGIDRRKRKHERSM
Sbjct: 181 GSGISKNDMKNAGIDRRKRKHERSM 203

[Close]

BLAST of Cmc07g0201131 vs. TAIR 10
Match: AT5G19910.1 (SOH1 family protein )

HSP 1 Score: 274.6 bits (701), Expect = 6.3e-74
Identity = 148/203 (72.91%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MAS   + ++A++ PS P N YKDPD GRQRFLLELEF+QCLANPTYIHYLAQNRY EDE
Sbjct: 1   MASPEEMGDDASEIPSPPKNTYKDPDGGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWK 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCL+FLELLQN NFR AMAHP NKELAHRQQFY+WK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNPNFRTAMAHPANKELAHRQQFYYWK 120

Query: 121 NYRNNRLKHILPRPLPEPAALPPPVSAPPQAPVPAPTPAPTVAASPATAALSPMQYGIPP 180
           NYRNNRLKHILPRPLPEP    PPV+  P   +P P P+ T A SP   ALSPMQY    
Sbjct: 121 NYRNNRLKHILPRPLPEPVPPQPPVA--PSTSLP-PAPSATAALSP---ALSPMQY---- 180

Query: 181 GPGLPKND---MKGAGIDRRKRK 201
              L KND   M   GIDRRKRK
Sbjct: 181 NNMLSKNDTRNMGATGIDRRKRK 193

[Close]

BLAST of Cmc07g0201131 vs. TAIR 10
Match: AT5G19910.2 (SOH1 family protein )

HSP 1 Score: 258.8 bits (660), Expect = 3.6e-69
Identity = 148/233 (63.52%), Postives = 159/233 (68.24%), Query Frame = 0


Query: 1   MASNHGLNEEAADNPSSPTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDE 60
           MAS   + ++A++ PS P N YKDPD GRQRFLLELEF+QCLANPTYIHYLAQNRY EDE
Sbjct: 1   MASPEEMGDDASEIPSPPKNTYKDPDGGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 60

Query: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNSNFRNAMAHPGNK------------ 120
           AFIGYLKYLQYWQRPEYIKFIMYPHCL+FLELLQN NFR AMAHP NK            
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNPNFRTAMAHPANKWFKMLGYWCFWN 120

Query: 121 ------------------ELAHRQQFYFWKNYRNNRLKHILPRPLPEPAALPPPVSAPPQ 180
                             ELAHRQQFY+WKNYRNNRLKHILPRPLPEP    PPV+  P 
Sbjct: 121 VFWGLVEFRVSLVQNLAYELAHRQQFYYWKNYRNNRLKHILPRPLPEPVPPQPPVA--PS 180

Query: 181 APVPAPTPAPTVAASPATAALSPMQYGIPPGPGLPKND---MKGAGIDRRKRK 201
             +P P P+ T A SP   ALSPMQY       L KND   M   GIDRRKRK
Sbjct: 181 TSLP-PAPSATAALSP---ALSPMQY----NNMLSKNDTRNMGATGIDRRKRK 223

The following BLAST results are available for this feature:

BLAST of Cmc07g0201131 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453845.1	8.5e-113	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 31 [Cucumis melo]...	[more]
XP_004146891.1	9.1e-107	95.15	mediator of RNA polymerase II transcription subunit 31 [Cucumis sativus] >KGN531...	[more]
XP_038880162.1	1.8e-102	94.66	mediator of RNA polymerase II transcription subunit 31 [Benincasa hispida]	[more]
XP_022141008.1	7.7e-98	90.87	mediator of RNA polymerase II transcription subunit 31 [Momordica charantia]	[more]
XP_022984406.1	6.5e-97	88.78	mediator of RNA polymerase II transcription subunit 31-like [Cucurbita maxima]	[more]

BLAST of Cmc07g0201131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYB1	8.9e-73	72.91	Mediator of RNA polymerase II transcription subunit 31 OS=Arabidopsis thaliana O...	[more]
Q54NI7	1.3e-31	58.76	Putative mediator of RNA polymerase II transcription subunit 31 OS=Dictyostelium...	[more]
A0JNN3	3.4e-24	48.57	Mediator of RNA polymerase II transcription subunit 31 OS=Bos taurus OX=9913 GN=...	[more]
Q9CXU1	4.5e-24	48.57	Mediator of RNA polymerase II transcription subunit 31 OS=Mus musculus OX=10090 ...	[more]
Q9Y3C7	5.9e-24	48.57	Mediator of RNA polymerase II transcription subunit 31 OS=Homo sapiens OX=9606 G...	[more]

BLAST of Cmc07g0201131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0Y1	4.1e-113	100.00	Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis melo var. maku...	[more]
A0A1S3BY12	4.1e-113	100.00	Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0KZ88	4.4e-107	95.15	Mediator of RNA polymerase II transcription subunit 31 OS=Cucumis sativus OX=365...	[more]
A0A6J1CJB2	3.7e-98	90.87	Mediator of RNA polymerase II transcription subunit 31 OS=Momordica charantia OX...	[more]
A0A6J1J551	3.2e-97	88.78	Mediator of RNA polymerase II transcription subunit 31 OS=Cucurbita maxima OX=36...	[more]

BLAST of Cmc07g0201131 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19910.1	6.3e-74	72.91	SOH1 family protein	[more]
AT5G19910.2	3.6e-69	63.52	SOH1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008831	Mediator complex, subunit Med31	PFAM	PF05669	Med31	coord: 30..122 e-value: 2.4E-35 score: 120.4
IPR008831	Mediator complex, subunit Med31	PANTHER	PTHR13186	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31	coord: 9..202
IPR038089	Mediator of RNA polymerase II, subunit Med31 superfamily	GENE3D	1.10.10.1340	Mediator of RNA polymerase II, submodule Med31 (Soh1)	coord: 17..119 e-value: 4.2E-41 score: 140.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..206
None	No IPR available	PANTHER	PTHR13186:SF1	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31	coord: 9..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0201131.1	Cmc07g0201131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0070847	core mediator complex
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity