Cmc07g0199961 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0199961
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	CMiso1.1chr07: 22675203 .. 22676880 (-)
RNA-Seq Expression	Cmc07g0199961
Synteny	Cmc07g0199961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAATTATTTAAAAAAAAAAGAAGAGAGAGAAAGAGAAAGAAAGAAAAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGACCTCAGAGAAAGACAGAGAAGAAGAACAACCACAACAACAAAGAAGAAAGAAGTTAATTTATTTTGTTCTCTATTTAAGTTAGCACCGCCGTTTCCCATGGCGGCGTTGCAGACCACTTCACTTTTGCATATCAAATAAAAAAATATTAAAAAAAAAAAAAAATTACCCTCTCCGAATCTGATTCCCAATTCTTCAACCCTTTTTTTTTTTTCTCAAAACTGCTTTCCGATCATCGTTCAGAGATTGTGTTGTTGTTGTTTTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGGGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCGACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACATCAACAGCAGCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCAGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCAGCGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGCTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCCTCTAAACGCCGTGACCGCCTCCTCCGTTCCGACGGCCTCAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGTTAACAATTCTTCTTCTCTTCTTTTAAAATTTGGGTACTTTTAACAAAACCCTCAATTAATTCTTCTTTCTTTTTAATTTAGGGTTGGACATGGCGAATTTTCCGATGGAAGTGACCACACCGGCTGTCTTTCGGTGTGTACGAATGACAACCTTGGACGAAACCGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCGCCCTCCTCCTCCTCCGCCGCCGCATTGCTCGATTCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAGCAATGAATAGGTGAAATTGAAATGAAAAAAAGAAAATTAATTAATTAAGTGAGTGAAGGAATTGAAGTTTCGAGTTTGTATTAAAAGTATATAATTTTTTTTTTTAAGAATAAATTTTTAAGCTTGTAATTTTTCAAGGGAGAGTTTGCATTAATTTGCCGCCATTGTTGGAATTTCGATGCTCTTTTTTCTATTTTTTTTTTCAATTTCTTTTCCTTGTCCTGGTTTGAATTATTTCTCTTGGTTTCGTACTTGGTTGGGCAAATTATCATAACCCTTTTGTATTAATTATTTTAATCTAAATCATATGGTTTTGATTTTTCTTCATATAATTATTTCAATGAATTTCAACCTTTTGGGGGTTTGTATCTAAACATC

mRNA sequence

TAATAATTATTTAAAAAAAAAAGAAGAGAGAGAAAGAGAAAGAAAGAAAAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGACCTCAGAGAAAGACAGAGAAGAAGAACAACCACAACAACAAAGAAGAAAGAAGTTAATTTATTTTGTTCTCTATTTAAGTTAGCACCGCCGTTTCCCATGGCGGCGTTGCAGACCACTTCACTTTTGCATATCAAATAAAAAAATATTAAAAAAAAAAAAAAATTACCCTCTCCGAATCTGATTCCCAATTCTTCAACCCTTTTTTTTTTTTCTCAAAACTGCTTTCCGATCATCGTTCAGAGATTGTGTTGTTGTTGTTTTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGGGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCGACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACATCAACAGCAGCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCAGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCAGCGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGCTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCCTCTAAACGCCGTGACCGCCTCCTCCGTTCCGACGGCCTCAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGCGAATTTTCCGATGGAAGTGACCACACCGGCTGTCTTTCGGTGTGTACGAATGACAACCTTGGACGAAACCGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCGCCCTCCTCCTCCTCCGCCGCCGCATTGCTCGATTCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAGCAATGAATAGGTGAAATTGAAATGAAAAAAAGAAAATTAATTAATTAAGTGAGTGAAGGAATTGAAGTTTCGAGTTTGTATTAAAAGTATATAATTTTTTTTTTTAAGAATAAATTTTTAAGCTTGTAATTTTTCAAGGGAGAGTTTGCATTAATTTGCCGCCATTGTTGGAATTTCGATGCTCTTTTTTCTATTTTTTTTTTCAATTTCTTTTCCTTGTCCTGGTTTGAATTATTTCTCTTGGTTTCGTACTTGGTTGGGCAAATTATCATAACCCTTTTGTATTAATTATTTTAATCTAAATCATATGGTTTTGATTTTTCTTCATATAATTATTTCAATGAATTTCAACCTTTTGGGGGTTTGTATCTAAACATC

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGGGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCGACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAAGAACATCAACAGCAGCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCAGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCAGCGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGCTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCCTCTAAACGCCGTGACCGCCTCCTCCGTTCCGACGGCCTCAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGCGAATTTTCCGATGGAAGTGACCACACCGGCTGTCTTTCGGTGTGTACGAATGACAACCTTGGACGAAACCGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCGCCCTCCTCCTCCTCCGCCGCCGCATTGCTCGATTCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAG

Protein sequence

MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS

Homology

[Close]

BLAST of Cmc07g0199961 vs. NCBI nr
Match: XP_008465489.1 (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo] >KAA0044774.1 protein SHI RELATED SEQUENCE 1-like [Cucumis melo var. makuwa] >TYK16689.1 protein SHI RELATED SEQUENCE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 549.3 bits (1414), Expect = 1.8e-152
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240
           TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240

Query: 241 STPPYPTPLSTYITAGTQFFLPPSS 266
           STPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 STPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Cmc07g0199961 vs. NCBI nr
Match: XP_004146546.1 (protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >XP_031740725.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN53280.1 hypothetical protein Csa_015228 [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 3.5e-143
Identity = 254/265 (95.85%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE+ QQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGGPVTSCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240
           TTPAVFRCVRMT+LDETDDQYAYQTAVNIGG IFKGILYDHGPEQPPPPPSSSS AALLD
Sbjct: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPSSSS-AALLD 240

Query: 241 STPPYPTPLSTYITAGTQFFLPPSS 266
            TPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 PTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Cmc07g0199961 vs. NCBI nr
Match: XP_038881630.1 (protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 394.4 bits (1012), Expect = 7.6e-106
Identity = 211/279 (75.63%), Postives = 223/279 (79.93%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEE 60
           MAGFFPLDGGGS GR PNY FPT TT     GGEIIHP T+GLFWYKNYERLETWE    
Sbjct: 1   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTTGGGEIIHP-TDGLFWYKNYERLETWE---- 60

Query: 61  HQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCA 120
            +QQQQ  QEQGGEGFVYSGDESPARSSLVMVRSGRGG   GG V SCQDCGNQAKKDC 
Sbjct: 61  -EQQQQ--QEQGGEGFVYSGDESPARSSLVMVRSGRGG--SGGQVMSCQDCGNQAKKDCV 120

Query: 121 HMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMAN 180
           HMRCRTCCKSRGFECETHVKSTWVPASKRR+R LR DG N KRPKD      SSGL+M  
Sbjct: 121 HMRCRTCCKSRGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKDA----ASSGLEMGI 180

Query: 181 FPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---- 240
           FP EV++ AVFRCVRMTTLDET +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S    
Sbjct: 181 FPAEVSSTAVFRCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGPEQPPTSASPNGG 240

Query: 241 -----SSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS 266
                ++ +A LLD  PPYPTPL+TYI AGTQFFLPP+S
Sbjct: 241 ALLITTAESATLLDPPPPYPTPLTTYIPAGTQFFLPPTS 265

[Close]

BLAST of Cmc07g0199961 vs. NCBI nr
Match: XP_038881624.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 394.4 bits (1012), Expect = 7.6e-106
Identity = 211/279 (75.63%), Postives = 223/279 (79.93%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEE 60
           MAGFFPLDGGGS GR PNY FPT TT     GGEIIHP T+GLFWYKNYERLETWE    
Sbjct: 4   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTTGGGEIIHP-TDGLFWYKNYERLETWE---- 63

Query: 61  HQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCA 120
            +QQQQ  QEQGGEGFVYSGDESPARSSLVMVRSGRGG   GG V SCQDCGNQAKKDC 
Sbjct: 64  -EQQQQ--QEQGGEGFVYSGDESPARSSLVMVRSGRGG--SGGQVMSCQDCGNQAKKDCV 123

Query: 121 HMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMAN 180
           HMRCRTCCKSRGFECETHVKSTWVPASKRR+R LR DG N KRPKD      SSGL+M  
Sbjct: 124 HMRCRTCCKSRGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKDA----ASSGLEMGI 183

Query: 181 FPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS---- 240
           FP EV++ AVFRCVRMTTLDET +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S    
Sbjct: 184 FPAEVSSTAVFRCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGPEQPPTSASPNGG 243

Query: 241 -----SSSAAALLDSTPPYPTPLSTYITAGTQFFLPPSS 266
                ++ +A LLD  PPYPTPL+TYI AGTQFFLPP+S
Sbjct: 244 ALLITTAESATLLDPPPPYPTPLTTYIPAGTQFFLPPTS 268

[Close]

BLAST of Cmc07g0199961 vs. NCBI nr
Match: KAG7031235.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.8 bits (930), Expect = 2.4e-96
Identity = 193/290 (66.55%), Postives = 214/290 (73.79%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGF+PL     GGR PNYH PT TT       TT+GLFWY+NYE LE W        QQ
Sbjct: 1   MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW--------QQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           Q  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+R LRSDG N KRP+D      SSGL+M NFP+EV
Sbjct: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMGNFPVEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPSSSS- 240
           ++ AVFRCVRMTTLDET+DQ+AYQTAVNIGGH FKGILYDHGPEQ     PPPPP+S+S 
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASP 240

Query: 241 -------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS 266
                              +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 DGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 267

[Close]

BLAST of Cmc07g0199961 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 8.3e-47
Identity = 136/373 (36.46%), Postives = 182/373 (48.79%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------- 60
           MAGFF LDGGG GG     +     +      P +E   WY+N                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -----YERLETWEG---------EEEHQQQQQPAQEQGGEG--------FVYSGDESPA- 120
                   LE W+           ++HQQ+        G G        F  SG+ S A 
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKST 180
               ++++M+RSG  GG  GG   SCQDCGNQAKKDC+HMRCRTCCKSRGFEC THV+ST
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGG--VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRST 180

Query: 181 WVPASKRRDR------------LLRSDGLNSKRPKDTHYH---------PTSSGLDMANF 240
           WVPA+KRR+R            L R + +  +  ++             P+ SGL++ NF
Sbjct: 181 WVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNF 240

Query: 241 PMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP------------- 266
           P EV++ AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP             
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

[Close]

BLAST of Cmc07g0199961 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-42
Identity = 132/335 (39.40%), Postives = 172/335 (51.34%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE 60
           MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSG------TESWLWCRNPNSNADGGEAGPSYK 60

Query: 61  -RLETWEGEEEH----QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSG-----RGGGS 120
             LE W+         QQQQQ  Q              P+  SL+    G     R G  
Sbjct: 61  GTLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSG 120

Query: 121 GGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR-SDG- 180
            GGP  SCQDCGNQ+KKDC+HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G 
Sbjct: 121 SGGP--SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ 180

Query: 181 ----LNSKRPKDTHYH---------------PTSSGLDMANFPMEVTTPAVFRCVRMTTL 240
               L    PK                      +SGL++ NFP EV++ AVFRCVR++++
Sbjct: 181 QPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSV 240

Query: 241 DETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA----- 261
           D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Sbjct: 241 DDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSC 300

[Close]

BLAST of Cmc07g0199961 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.1e-42
Identity = 134/363 (36.91%), Postives = 175/363 (48.21%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPT-TEGLFWYKN--------------YE 60
           MA FF L     GG     H     +  + + PT +   F Y+N              Y+
Sbjct: 1   MANFFSL-----GGNQEQQH--QEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYK 60

Query: 61  RLETWEG-------EEEHQQQQQ------PAQE-----------QGGEGF-VYSGDESPA 120
             E W+         + HQQQQQ      P Q+               GF + +GD   +
Sbjct: 61  GFELWQSGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEAS 120

Query: 121 RSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVP 180
           RS  VM+RSG GG        SCQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWVP
Sbjct: 121 RSGFVMMRSGGGG-------ISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVP 180

Query: 181 ASKRRDRLLRSDGL-----------NSKRPKDTHYHPTSS------------GLDMANFP 240
           A+KRR+R  +   L           N+ + K     P++S            GL++  FP
Sbjct: 181 AAKRRERQQQLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFP 240

Query: 241 MEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQP--------PPP 265
            +V T AVF+C++M+++++ +DQ AYQ AV+IGGH+FKGILYD G E             
Sbjct: 241 SKVRTSAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDT 300

[Close]

BLAST of Cmc07g0199961 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.5e-40
Identity = 121/303 (39.93%), Postives = 148/303 (48.84%), Query Frame = 0


Query: 41  YKNYERLETWE----GEEEHQQQQQPAQEQGGEGFVYSGDESPA---------RSSLVMV 100
           Y N +  E W      ++EHQQQQQ  Q        YS    P+         RS  +  
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 101 RSGRGGGSGGGPVT-----SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPAS 160
                   GG  VT     +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+
Sbjct: 105 NVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAA 164

Query: 161 KRRDRLLRSDGL-----------NSKRPK--------DTHYHPTSSGLDMAN-------- 220
           KRR+RL +   L           N+KR +        D   H    G  +AN        
Sbjct: 165 KRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANS 224

Query: 221 ---------FPMEVTTPAVFRCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPE 266
                     P EV +PA+FRCVR++++  DE D  YAYQTAVNIGGHIFKGILYD GPE
Sbjct: 225 NSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of Cmc07g0199961 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-36
Identity = 82/155 (52.90%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 102 SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR----------- 161
           SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +           
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGG 152

Query: 162 -----SDGLNSKRPKDTHYHPT-------------SSGLDM--ANFPMEVTTPAVFRCVR 221
                + G  S  PK  H  PT             S+GL+M  A+FP EV++ A+FRCV+
Sbjct: 153 SGSGGAGGGGSSIPK-RHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVK 212

Query: 222 MTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE 225
           M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Sbjct: 213 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]

BLAST of Cmc07g0199961 vs. ExPASy TrEMBL
Match: A0A5A7TNR6 (Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005220 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 8.9e-153
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240
           TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240

Query: 241 STPPYPTPLSTYITAGTQFFLPPSS 266
           STPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 STPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Cmc07g0199961 vs. ExPASy TrEMBL
Match: A0A1S3CNX3 (protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 8.9e-153
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240
           TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD
Sbjct: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240

Query: 241 STPPYPTPLSTYITAGTQFFLPPSS 266
           STPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 STPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Cmc07g0199961 vs. ExPASy TrEMBL
Match: A0A0A0KUG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.7e-143
Identity = 254/265 (95.85%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE+ QQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGGPVTSCQDCGNQAKKDC HMRCR
Sbjct: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EV
Sbjct: 121 TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAAALLD 240
           TTPAVFRCVRMT+LDETDDQYAYQTAVNIGG IFKGILYDHGPEQPPPPPSSSS AALLD
Sbjct: 181 TTPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPSSSS-AALLD 240

Query: 241 STPPYPTPLSTYITAGTQFFLPPSS 266
            TPPYPTPLSTYITAGTQFFLPPSS
Sbjct: 241 PTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Cmc07g0199961 vs. ExPASy TrEMBL
Match: A0A6J1FUH1 (protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.4e-96
Identity = 193/289 (66.78%), Postives = 213/289 (73.70%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGFFPL     GGR PNYH PT TT       TT+GLFWY+NYE L  W        QQ
Sbjct: 1   MAGFFPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLGIW--------QQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           Q  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+R LRSDG N KRP+D      SSGL+M NFP+EV
Sbjct: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMRNFPVEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQ----PPPPPSSSS-- 240
           ++ AVFRCVRMTTLDET+DQ+AYQTAVNIGGH FKGILYDHGPEQ    PPPPP+S+S  
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPD 240

Query: 241 ------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS 266
                             +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 GGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of Cmc07g0199961 vs. ExPASy TrEMBL
Match: A0A6J1J480 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.7e-95
Identity = 192/288 (66.67%), Postives = 211/288 (73.26%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQQQ 60
           MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W        QQ
Sbjct: 1   MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQ 60

Query: 61  QPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCR 120
           Q  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V SCQDCGNQAKKDC HMRCR
Sbjct: 61  QQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVISCQDCGNQAKKDCLHMRCR 120

Query: 121 TCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPMEV 180
           TCCKSRGF+CETHVKSTWVPASKRR+R LRSD  N KRP+D      SSGL+M NFPMEV
Sbjct: 121 TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEV 180

Query: 181 TTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSSS--- 240
           ++ AVFRCVRMTTLDET+DQ+AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+S   
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDG 240

Query: 241 -----------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS 266
                            +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Sbjct: 241 GALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of Cmc07g0199961 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 188.7 bits (478), Expect = 5.9e-48
Identity = 136/373 (36.46%), Postives = 182/373 (48.79%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------- 60
           MAGFF LDGGG GG     +     +      P +E   WY+N                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -----YERLETWEG---------EEEHQQQQQPAQEQGGEG--------FVYSGDESPA- 120
                   LE W+           ++HQQ+        G G        F  SG+ S A 
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKST 180
               ++++M+RSG  GG  GG   SCQDCGNQAKKDC+HMRCRTCCKSRGFEC THV+ST
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGG--VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRST 180

Query: 181 WVPASKRRDR------------LLRSDGLNSKRPKDTHYH---------PTSSGLDMANF 240
           WVPA+KRR+R            L R + +  +  ++             P+ SGL++ NF
Sbjct: 181 WVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNF 240

Query: 241 PMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP------------- 266
           P EV++ AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP             
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

[Close]

BLAST of Cmc07g0199961 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43
Identity = 132/335 (39.40%), Postives = 172/335 (51.34%), Query Frame = 0


Query: 1   MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE 60
           MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSG------TESWLWCRNPNSNADGGEAGPSYK 60

Query: 61  -RLETWEGEEEH----QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSG-----RGGGS 120
             LE W+         QQQQQ  Q              P+  SL+    G     R G  
Sbjct: 61  GTLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSG 120

Query: 121 GGGPVTSCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR-SDG- 180
            GGP  SCQDCGNQ+KKDC+HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G 
Sbjct: 121 SGGP--SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ 180

Query: 181 ----LNSKRPKDTHYH---------------PTSSGLDMANFPMEVTTPAVFRCVRMTTL 240
               L    PK                      +SGL++ NFP EV++ AVFRCVR++++
Sbjct: 181 QPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSV 240

Query: 241 DETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA----- 261
           D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Sbjct: 241 DDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSC 300

[Close]

BLAST of Cmc07g0199961 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 165.6 bits (418), Expect = 5.3e-41
Identity = 121/303 (39.93%), Postives = 148/303 (48.84%), Query Frame = 0


Query: 41  YKNYERLETWE----GEEEHQQQQQPAQEQGGEGFVYSGDESPA---------RSSLVMV 100
           Y N +  E W      ++EHQQQQQ  Q        YS    P+         RS  +  
Sbjct: 45  YNNNKGFEIWPPQYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYF 104

Query: 101 RSGRGGGSGGGPVT-----SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPAS 160
                   GG  VT     +CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+
Sbjct: 105 NVVSDHEPGGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAA 164

Query: 161 KRRDRLLRSDGL-----------NSKRPK--------DTHYHPTSSGLDMAN-------- 220
           KRR+RL +   L           N+KR +        D   H    G  +AN        
Sbjct: 165 KRRERLAQLASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANS 224

Query: 221 ---------FPMEVTTPAVFRCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPE 266
                     P EV +PA+FRCVR++++  DE D  YAYQTAVNIGGHIFKGILYD GPE
Sbjct: 225 NSGLEVSQHLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE 284

[Close]

BLAST of Cmc07g0199961 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 154.8 bits (390), Expect = 9.4e-38
Identity = 82/155 (52.90%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 102 SCQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLR----------- 161
           SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +           
Sbjct: 93  SCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGG 152

Query: 162 -----SDGLNSKRPKDTHYHPT-------------SSGLDM--ANFPMEVTTPAVFRCVR 221
                + G  S  PK  H  PT             S+GL+M  A+FP EV++ A+FRCV+
Sbjct: 153 SGSGGAGGGGSSIPK-RHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVK 212

Query: 222 MTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE 225
           M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Sbjct: 213 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]

BLAST of Cmc07g0199961 vs. TAIR 10
Match: AT2G21400.1 (SHI-related sequence3 )

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 103 CQDCGNQAKKDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDT 162
           C+DCGNQAKKDC +MRCRTCCKS+ F C+TH+KSTWVPA +R     +S  L++  PK  
Sbjct: 9   CEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRRSHHKHQSQPLSTSIPKGV 68

Query: 163 HYHPTSSGLDMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHG 222
             H T       +FP E+++ A FRCV+++++D+  +QYAYQT VNIGGH+F+GIL+D G
Sbjct: 69  QIHTTP-----GHFPAELSSLADFRCVKVSSIDDGKEQYAYQTTVNIGGHVFRGILHDQG 123

The following BLAST results are available for this feature:

BLAST of Cmc07g0199961 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465489.1	1.8e-152	100.00	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo] >KAA0044774.1 prot...	[more]
XP_004146546.1	3.5e-143	95.85	protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >XP_031740725.1 protein SHI REL...	[more]
XP_038881630.1	7.6e-106	75.63	protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]	[more]
XP_038881624.1	7.6e-106	75.63	protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]	[more]
KAG7031235.1	2.4e-96	66.55	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cmc07g0199961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	8.3e-47	36.46	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	1.6e-42	39.40	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	6.1e-42	36.91	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	7.5e-40	39.93	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
O65517	1.3e-36	52.90	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]

BLAST of Cmc07g0199961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TNR6	8.9e-153	100.00	Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CNX3	8.9e-153	100.00	protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3...	[more]
A0A0A0KUG2	1.7e-143	95.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1	[more]
A0A6J1FUH1	3.4e-96	66.78	protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3...	[more]
A0A6J1J480	1.7e-95	66.67	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 ...	[more]

BLAST of Cmc07g0199961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	5.9e-48	36.46	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	1.1e-43	39.40	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	5.3e-41	39.93	SHI-related sequence 5	[more]
AT4G36260.1	9.4e-38	52.90	Lateral root primordium (LRP) protein-related	[more]
AT2G21400.1	1.2e-35	54.17	SHI-related sequence3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 176..223 e-value: 1.2E-24 score: 84.0
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 102..144 e-value: 2.2E-27 score: 92.7
None	No IPR available	PFAM	PF05142	DUF702	coord: 101..224 e-value: 4.9E-52 score: 176.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..165
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..225
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0199961.1	Cmc07g0199961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity