Cmc07g0199171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0199171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transcription initiation factor IIE subunit beta
Location	CMiso1.1chr07: 22185239 .. 22188152 (+)
RNA-Seq Expression	Cmc07g0199171
Synteny	Cmc07g0199171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTTGATTTCCTTCCAAGGACCTAACCCCATTTCTGATTTTAACCTTCCTCAAACGCACTCGTTCCTCAGCTTTCTCCCCCTCGCGCTTTTCCAATTCCAGCTTACATCTTCATTCTTCTCGATCTCCATAGCCCCACAAACCGAACTCGATTCAACAATCACCTCCACTACGTATACTACAGATCATTAGACATCGACTAGCGATCTCGCCGTCGTCTTATTCACGGCGGTTGATTCCGGTATATCTAACCGATGCGATTCCTGGTATTGTACGACATGCCCTTTTCTTTTCTGGGTATTTTCAATTGTTTGTTGGGCTTGGTGGGACGCCTGGCAATTTGATTTTATTGGTTGAATCTATGTTGATGATGTTTATCGTTATTTTGATTGTTAGGGTTGAGAATTATCGAAACTCTAAGGGGATTTAATGGCGTTGCAAGAACAATTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAGAGTACTTTGTCTGGCATTGCTGCATCCAAGTCTGTATCCAAGTCTACACCCAAGTTTACGCCTGCACCCGCTGCTTCCATTGCAAGACCTCTGGCTCCTGCTGTAAAATTTTCAAATGATACTGAAAGACTTCAACATATTAACAGCATAAGGAAGTCCCCAGTCGGGGCGCAGATCAAGAGGGTTATTGACCTGCTGCTGGAGGTTCATATCCATCACTCCATCTTTCTTATATTTCCCCGTTTGTTTTCCTCCTTCTATCTAATCTGCTGTACTTGGTTTTTTGTGTTTGACGGAATTCTTCAACGTAAGGCTTTGTATTGGATAGGATTTAATGGCTGTGTATTGATTTGAGCTGTGTAGAGCTTATGCTGCTGAAATTTTGCATTTTAATCTGTCCAAGTTTCGTAAGTTGAATGTGTGTTTTTTAATGGATACCGTTTTAACTGGGGGATTTTGCTGGAATGAGGACTTCTTCAGGTAGTGAGACTTGTGATTGGCATTAGATGGCAAGAGGAGCCAGGGCCCTCTTCAGTGGCTTTTGGGTGGTCGTTTTGCCTGCTTTTGTTGGTGCAATATTGTATTTTTACATACGAATTACATATGTTAATCTAATCCCCTCCCTGTAATCTTCTCTGGATCTTGAATTGGCTGTGAAAAAGCTAAAAAGAAGTCCTACTGAAATGCCTTTTTTCCCTATTGGTAGTAAATTGGAACCTTAGGGATATGTTACAAACTTACAGCTTGCTTATTGTGCATGTTAACAGACAAGGCAAGCCTTTACACCTGAGCAAATCAATGAAGCATGTTATGTTGATATAAATTCCAACAAGGCTGTCTATGATAGTCTGCGGAATAACCCAAAGGTGCACTATGACGGGAGGCGTTTCTCATACAAGGTAATTTATATTCTCAAACACCATTATTATTTACATCGACTTGTACTTCTTTGGTTTAAATATTTGAACTTAAGGATGACATTTTCCCCCTCCTTTTCTTTTACCCCTTCTGTTTTCGGTGTATTCAGTCCAAGCATGACCTGAAGGATAAGAATCAACTTCTTTACTTGATACGAAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATGCGTATCCAAGCGTTATGGAGGACTTGCAAGTATGTATATATTCTTCTTTTTAATGTGGTTTTCCCATTCTGAATGCAAAAACGTGAAAAATAACAAATGACTCTTGAATGATGCTATCCTTAATATAACTTATTCGGCAAAATAACCTTTGTAAAATTCAATGTATTGGCTAATATGGACATCAAATATCTATGTGGCTTGCTCACTCTTCATGTTGACGTTCAGGGTTCTCTTGTTCATGCTATACAATAAGCCAGTCTATTTTATTTTCTTCCCGGTTAGACTGTGGTTTCTACTCTAGAAGGTTTTGTTCATCCAACAATTCCTATGCCAAAATAGCAGCTGAAATTTAAATTGAAGGATTTAACCCATGATTTATAGTCCTTGTCAAAACAAATTGCTTTTCTAATTCAGAAGAGGAAACAAAGAGAAAATTAAACAGCGGGAGCCAATCTGAGATTAATGAGACGTAAAATGACTCAATCTTAAACTATAAGGTCTGACAAATATTTACAATTTTTTGAAAGCAATATACTCAAGGAAGCATTGAACTTAGGGTTGTTGCATCCAAATTGTAGTTGATCACCGGCCCTCAAAATTGTTACAACTTCTCTGCTTATATAATGAATGGAAAATACATGGCTTTACTCTTTGTTTATGAATGGAAAATGGAGTCCGTTAGCTTTACTGTTTAGCTTACATTATATTTTCCCCACTTGTTTAGGCCCTAAAAGCCTCAGGCCAGGTTTGGCTTCTCTCAAACTTCGATTCACAAGAAGATATTGCCTACCCAAATGACCCACGAATTCAAATCAAGGTAGACGATGATCTGAAGCAGCTCTTTCGGGAGATCGAATTACCTCGTGACATGCTTGATGTCGAAAAGGATCTACAGAAGAATGGGATGAAGCCTGCAACCAACACTGCAAAGAGGCGAGCCAACGCACAACATGTAGCATCCTCAAAACCCAAGCCGAAGAAAAAGAAGCAAGAAATCAGCAAGAGGACTAAGCTCACTAATGCACATCTTCCCGAGCTCTTCAAAAACTAGAGAACCGTATAGGCTGGCCTGCAACAATATATTTTGTATGGATAATTTATGGACTCTGTAGATAGGATTCAATCATTCCTTCTGTTTGGTGTATTGCCTTCTATTTTCCATGATCTCATCATAGAATGAAATGCTCCTGTGATTTACTCTTGTGCATGTGTTTGCTTTACATTAATTAATTGAACAATTTGAAATGTAAGATATAAGTTCAACTAAACTAGATATATATGGTATTAGAAGCTTTGTCATATATACCAACTTTTG

mRNA sequence

TTGGTTGATTTCCTTCCAAGGACCTAACCCCATTTCTGATTTTAACCTTCCTCAAACGCACTCGTTCCTCAGCTTTCTCCCCCTCGCGCTTTTCCAATTCCAGCTTACATCTTCATTCTTCTCGATCTCCATAGCCCCACAAACCGAACTCGATTCAACAATCACCTCCACTACGTATACTACAGATCATTAGACATCGACTAGCGATCTCGCCGTCGTCTTATTCACGGCGGTTGATTCCGGTATATCTAACCGATGCGATTCCTGGGTTGAGAATTATCGAAACTCTAAGGGGATTTAATGGCGTTGCAAGAACAATTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAGAGTACTTTGTCTGGCATTGCTGCATCCAAGTCTGTATCCAAGTCTACACCCAAGTTTACGCCTGCACCCGCTGCTTCCATTGCAAGACCTCTGGCTCCTGCTGTAAAATTTTCAAATGATACTGAAAGACTTCAACATATTAACAGCATAAGGAAGTCCCCAGTCGGGGCGCAGATCAAGAGGGTTATTGACCTGCTGCTGGAGACAAGGCAAGCCTTTACACCTGAGCAAATCAATGAAGCATGTTATGTTGATATAAATTCCAACAAGGCTGTCTATGATAGTCTGCGGAATAACCCAAAGGTGCACTATGACGGGAGGCGTTTCTCATACAAGTCCAAGCATGACCTGAAGGATAAGAATCAACTTCTTTACTTGATACGAAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATGCGTATCCAAGCGTTATGGAGGACTTGCAAGCCCTAAAAGCCTCAGGCCAGGTTTGGCTTCTCTCAAACTTCGATTCACAAGAAGATATTGCCTACCCAAATGACCCACGAATTCAAATCAAGGTAGACGATGATCTGAAGCAGCTCTTTCGGGAGATCGAATTACCTCGTGACATGCTTGATGTCGAAAAGGATCTACAGAAGAATGGGATGAAGCCTGCAACCAACACTGCAAAGAGGCGAGCCAACGCACAACATGTAGCATCCTCAAAACCCAAGCCGAAGAAAAAGAAGCAAGAAATCAGCAAGAGGACTAAGCTCACTAATGCACATCTTCCCGAGCTCTTCAAAAACTAGAGAACCGTATAGGCTGGCCTGCAACAATATATTTTGTATGGATAATTTATGGACTCTGTAGATAGGATTCAATCATTCCTTCTGTTTGGTGTATTGCCTTCTATTTTCCATGATCTCATCATAGAATGAAATGCTCCTGTGATTTACTCTTGTGCATGTGTTTGCTTTACATTAATTAATTGAACAATTTGAAATGTAAGATATAAGTTCAACTAAACTAGATATATATGGTATTAGAAGCTTTGTCATATATACCAACTTTTG

Coding sequence (CDS)

ATGGCGTTGCAAGAACAATTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAGAGTACTTTGTCTGGCATTGCTGCATCCAAGTCTGTATCCAAGTCTACACCCAAGTTTACGCCTGCACCCGCTGCTTCCATTGCAAGACCTCTGGCTCCTGCTGTAAAATTTTCAAATGATACTGAAAGACTTCAACATATTAACAGCATAAGGAAGTCCCCAGTCGGGGCGCAGATCAAGAGGGTTATTGACCTGCTGCTGGAGACAAGGCAAGCCTTTACACCTGAGCAAATCAATGAAGCATGTTATGTTGATATAAATTCCAACAAGGCTGTCTATGATAGTCTGCGGAATAACCCAAAGGTGCACTATGACGGGAGGCGTTTCTCATACAAGTCCAAGCATGACCTGAAGGATAAGAATCAACTTCTTTACTTGATACGAAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATGCGTATCCAAGCGTTATGGAGGACTTGCAAGCCCTAAAAGCCTCAGGCCAGGTTTGGCTTCTCTCAAACTTCGATTCACAAGAAGATATTGCCTACCCAAATGACCCACGAATTCAAATCAAGGTAGACGATGATCTGAAGCAGCTCTTTCGGGAGATCGAATTACCTCGTGACATGCTTGATGTCGAAAAGGATCTACAGAAGAATGGGATGAAGCCTGCAACCAACACTGCAAAGAGGCGAGCCAACGCACAACATGTAGCATCCTCAAAACCCAAGCCGAAGAAAAAGAAGCAAGAAATCAGCAAGAGGACTAAGCTCACTAATGCACATCTTCCCGAGCTCTTCAAAAACTAG

Protein sequence

MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

Homology

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BLAST of Cmc07g0199171 vs. NCBI nr
Match: XP_008452012.1 (PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_008452013.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >KAA0044840.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa] >TYK16624.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 533.5 bits (1373), Expect = 1.1e-147
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Cmc07g0199171 vs. NCBI nr
Match: XP_011653191.1 (general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothetical protein Csa_014626 [Cucumis sativus])

HSP 1 Score: 530.4 bits (1365), Expect = 9.2e-147
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Cmc07g0199171 vs. NCBI nr
Match: XP_038906431.1 (general transcription factor IIE subunit 2-like [Benincasa hispida])

HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141
Identity = 269/277 (97.11%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQ+TLSGIAA+KS SKSTPKFTPAPAAS  RP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQTTLSGIAAAKSASKSTPKFTPAPAAS--RPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPK KKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKLKKKKQEISKRTKLTNAHLPELFKN 275

[Close]

BLAST of Cmc07g0199171 vs. NCBI nr
Match: XP_022984812.1 (general transcription factor IIE subunit 2-like [Cucurbita maxima])

HSP 1 Score: 500.4 bits (1287), Expect = 1.0e-137
Identity = 261/277 (94.22%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RP APA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of Cmc07g0199171 vs. NCBI nr
Match: XP_022931511.1 (general transcription factor IIE subunit 2-like [Cucurbita moschata] >XP_023552207.1 general transcription factor IIE subunit 2-like [Cucurbita pepo subsp. pepo] >KAG7015180.1 General transcription factor IIE subunit 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.2 bits (1284), Expect = 2.3e-137
Identity = 260/277 (93.86%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RP APA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+CYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of Cmc07g0199171 vs. ExPASy Swiss-Prot
Match: Q54KJ8 (General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 GN=gtf2e2 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 71/271 (26.20%), Postives = 138/271 (50.92%), Query Frame = 0


Query: 10  FKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTERLQHINSIR 69
           FK+ Q +   TL+ I    S + S  K+ P  +       A   + S  T        ++
Sbjct: 6   FKETQMKAIETLNSIKKPSSSTNSAFKYIPKISGGGGSSSANR-QSSIYTANTLRDKQVK 65

Query: 70  KSPVGAQIKRVIDLL--LETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGR-R 129
           + P    +  +++ L  LE   A T E ++   ++ I+    + + LRNN K+   G  R
Sbjct: 66  EKPSNRIVYDIVNYLKTLEGIPADTKEIMHSTNHM-IDDKPEILELLRNNEKIIDHGNDR 125

Query: 130 FSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLLSNFDSQ 189
           FS+K K +++ +  +L L+  +P GI V +L ++Y +   D++ LK + Q++ +   +S 
Sbjct: 126 FSFKPKFNVRTQRDILDLLPNYPGGILVSELAESYNNAESDVKKLKETKQIFAIKAAESA 185

Query: 190 EDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHV 249
            DI +PND R+++ +  +L  +++ I+LP +  D+EK+++  G+    +  +   +A+  
Sbjct: 186 CDIIFPNDERLRVPLSSELVDMWKSIKLPNE-ADLEKEMKDAGL----SVVESVESARQT 245

Query: 250 ASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
            S+K K ++KK    + TK+TN H+     N
Sbjct: 246 KSTKLKKERKK----RITKVTNTHIENFNPN 265

[Close]

BLAST of Cmc07g0199171 vs. ExPASy Swiss-Prot
Match: P79011 (Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tfa2 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-12
Identity = 61/205 (29.76%), Postives = 109/205 (53.17%), Query Frame = 0


Query: 75  AQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRR--FSYKSK 134
           +Q+   ++ L E  +  T E+I  A Y+       + + L+ N +++YD R   F++K  
Sbjct: 81  SQLHYAVEYLKERNEPKTAEEI--ASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPL 140

Query: 135 HDLKDKNQLLYLI--RKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL-SNFDSQEDI 194
           H+++    LL  +  +K   G+++ +L+D +P+V  +L+ L+  G+V LL +  D    +
Sbjct: 141 HNIRSGAGLLAYLDSQKTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKM 200

Query: 195 AYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHV 254
            + ND      VD + +Q++ EI +P   LD+  +L K G+KP +   +T KR  + Q  
Sbjct: 201 VWRNDKSCDCHVDKEFQQVWHEIPIP-PTLDLASELGKYGLKPTSVDPSTVKRAGHNQ-- 260

Query: 255 ASSKPKPKKKKQEISKRTKLTNAHL 272
               PK KK K   ++R K+TN HL
Sbjct: 261 ---TPKQKKPK---TRRGKITNTHL 274

[Close]

BLAST of Cmc07g0199171 vs. ExPASy TrEMBL
Match: A0A1S3BS95 (Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC103493148 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.3e-148
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Cmc07g0199171 vs. ExPASy TrEMBL
Match: A0A5A7TNR4 (Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004520 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.3e-148
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Cmc07g0199171 vs. ExPASy TrEMBL
Match: A0A0A0KWU5 (Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=Csa_4G049080 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.5e-147
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYL+RKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of Cmc07g0199171 vs. ExPASy TrEMBL
Match: A0A6J1J372 (Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482983 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.0e-138
Identity = 261/277 (94.22%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RP APA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of Cmc07g0199171 vs. ExPASy TrEMBL
Match: A0A6J1ETU7 (Transcription initiation factor IIE subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111437664 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137
Identity = 260/277 (93.86%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQ+TLSGIAASK+ + +TP+FTPAPAAS  RP APA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+CYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of Cmc07g0199171 vs. TAIR 10
Match: AT4G20330.1 (Transcription initiation factor TFIIE, beta subunit )

HSP 1 Score: 359.4 bits (921), Expect = 2.6e-99
Identity = 196/280 (70.00%), Postives = 235/280 (83.93%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAA-SIARPLAPAVKFSNDT 60
           MAL+EQLD+F KQQ +CQSTLS IA+S+  + S+ +  P PAA +  +P A  VKFS+DT
Sbjct: 1   MALKEQLDKFNKQQVKCQSTLSSIASSRERTSSSRQNVPLPAAITQKKPDAAPVKFSSDT 60

Query: 61  ERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPK 120
           ERLQ+IN+IRK+PVGAQIKRVIDLL E R A TPEQINE C+VD+++NKAV+DSLR NPK
Sbjct: 61  ERLQNINNIRKAPVGAQIKRVIDLLYERRLALTPEQINEWCHVDMHANKAVFDSLRKNPK 120

Query: 121 VHYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWL 180
            HYDGRRFSYK+ HD+ DKNQLL L+RK+ +GIAV+DLKDAYP+VMEDL+AL ASG ++L
Sbjct: 121 AHYDGRRFSYKATHDVNDKNQLLSLVRKYLDGIAVVDLKDAYPNVMEDLKALSASGDIYL 180

Query: 181 LSNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKR 240
           LSN  SQEDIAYPND + +IKVDD+ K LFR+I +P DMLDVEK+L K G+KPATNTA+R
Sbjct: 181 LSN--SQEDIAYPNDFKCEIKVDDEFKALFRDINIPNDMLDVEKELLKIGLKPATNTAER 240

Query: 241 RANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN 278
           RA AQ H  S+KPK  KKKKQEISKRTKLTNAHLPELF+N
Sbjct: 241 RAAAQTHGISNKPKDKKKKKQEISKRTKLTNAHLPELFQN 278

[Close]

BLAST of Cmc07g0199171 vs. TAIR 10
Match: AT4G21010.1 (Transcription initiation factor TFIIE, beta subunit )

HSP 1 Score: 292.4 bits (747), Expect = 3.9e-79
Identity = 167/280 (59.64%), Postives = 217/280 (77.50%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60
           MAL+EQLD+F KQQE+CQSTLS I++S++    +  + PA A +  +P     KFS +T+
Sbjct: 1   MALREQLDKFNKQQEKCQSTLSSISSSRTALSRS--YVPA-ATTSQKPNVFRGKFSENTK 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           +LQHI +IR S VGAQ+K VIDLL +TR A+T EQINEACYVD+++NKAV+DSLR NPKV
Sbjct: 61  QLQHITNIRNSAVGAQMKIVIDLLFKTRLAYTAEQINEACYVDMHNNKAVFDSLRKNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQV-WL 180
           HYDGRRFSYK+ H++KDK QLL  + K  + I V DLKDAYP+VMEDL++LK+SG++ WL
Sbjct: 121 HYDGRRFSYKATHNIKDKKQLLSFVNKSDKVIDVSDLKDAYPNVMEDLKSLKSSGEIFWL 180

Query: 181 LSNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKR 240
           LSN DS+E   Y N+     K+DD+LK LFR+I +P DML+VEK+L K G+KPATN A+R
Sbjct: 181 LSNTDSKEGTVYRNNMEYP-KIDDELKALFRDI-IPSDMLEVEKELLKIGLKPATNIAER 240

Query: 241 RANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN 278
           RA  Q H  S+KPK  KKKK+EI+ RTKLTN+H+ ELF++
Sbjct: 241 RAAEQLHGVSNKPKDKKKKKKEITNRTKLTNSHMLELFQS 275

The following BLAST results are available for this feature:

BLAST of Cmc07g0199171 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452012.1	1.1e-147	100.00	PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_00...	[more]
XP_011653191.1	9.2e-147	99.28	general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothe...	[more]
XP_038906431.1	1.2e-141	97.11	general transcription factor IIE subunit 2-like [Benincasa hispida]	[more]
XP_022984812.1	1.0e-137	94.22	general transcription factor IIE subunit 2-like [Cucurbita maxima]	[more]
XP_022931511.1	2.3e-137	93.86	general transcription factor IIE subunit 2-like [Cucurbita moschata] >XP_0235522...	[more]

BLAST of Cmc07g0199171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KJ8	1.5e-14	26.20	General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 ...	[more]
P79011	2.4e-12	29.76	Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (s...	[more]

BLAST of Cmc07g0199171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BS95	5.3e-148	100.00	Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7TNR4	5.3e-148	100.00	Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0KWU5	4.5e-147	99.28	Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A6J1J372	5.0e-138	94.22	Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1ETU7	1.1e-137	93.86	Transcription initiation factor IIE subunit beta OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Cmc07g0199171 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20330.1	2.6e-99	70.00	Transcription initiation factor TFIIE, beta subunit	[more]
AT4G21010.1	3.9e-79	59.64	Transcription initiation factor TFIIE, beta subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003166	Transcription factor TFIIE beta subunit, DNA-binding domain	PFAM	PF02186	TFIIE_beta	coord: 75..134 e-value: 2.4E-9 score: 37.4
IPR003166	Transcription factor TFIIE beta subunit, DNA-binding domain	PROSITE	PS51351	TFIIE_BETA_C	coord: 61..136 score: 10.965059
IPR040501	TFA2, Winged helix domain 2	PFAM	PF18121	TFA2_Winged_2	coord: 136..193 e-value: 1.4E-14 score: 53.5
IPR016656	Transcription initiation factor TFIIE, beta subunit	PIRSF	PIRSF016398	TFIIE-beta	coord: 1..277 e-value: 9.8E-25 score: 84.8
IPR016656	Transcription initiation factor TFIIE, beta subunit	PANTHER	PTHR12716	TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT	coord: 1..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..277
None	No IPR available	PANTHER	PTHR12716:SF13	BNAA02G21830D PROTEIN	coord: 1..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0199171.1	Cmc07g0199171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005673	transcription factor TFIIE complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003743	translation initiation factor activity