Cmc07g0198471 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0198471
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr07: 21679500 .. 21681329 (+)
RNA-Seq Expression	Cmc07g0198471
Synteny	Cmc07g0198471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAATGAGACAAAAGAAACAATATGTATAAGCTTCTTCAATTACATACAATCCAAGCATTGAGCAACTTTACACTAAAACTAAAGCAAATTGAATACAAGAAATGGACACTGACCAATTATTGCTCACCTTCTTTTCTAAAATTTAGTCATCCAAACTTTTAAATTTGTGTTGAATATTCTTTTTCTGTTAAATTTAAAATTATTAAAAACTAATATTTCTATCATATACAAAATTTTAAATATTATAATAAAACTACAAATATTTAATTTCGTGTCGATTTAACAAAAAATGATAAACAATCTTTAAGTGGAAAAATTTTCAGCCCATACTCAATGTCTAGCTGAAAAGGATATTTCTTCTATATTAACATTATGGTCTAATAAAGATGCACATTTCAAACTTTCGTGAAAAGTAAAACTCAATTAAAAAATTTCAACCGTACGTTCGATGAGATGTTTTTCAAGTAAACAATTGATTTCTACTGGACTAGGGGAAAATACCTATTTTTTGAAATTTTTTAATTATAAATTGGAATTAATCTTGATTTATATATTATGTAAATAAAGATATCAATAAATGAACTAATGAAGTAACATTTGGGCTAAATTTCCAAAACCAAAGAAAAAAGCAAACGAGGTTTGAGAGATTAAATAGGTAATTTTAAAATTTCAGGGTCAAAAAACTAAAAAATAAAAAATGTATACTTGGATGTTTAAAATTTTGGTGACTTAGTTTAGTCATAAAATTAGGAGTAAATATGTAATTAATCTTTAAAAAAATCTCTAATAACAACAACTGAAAAATGGCGTTTCTTGGATTGGAAATATTCACAAATTTTTCCAAGTTGAAATTCCAGAAGAACAAACAGATGAGATAACTACAAGGAAGAAGATAAAGAAGAAATCGCCATCACCGATCTGTTTATCATCATTGAGAATCCTTTTGAAGAAACGGTTCAAGAACAGCCGATCTAGGGTTCTTCATCGGCGGTCCTTTTTCTCTTCGTTCCAGCTCCTCCAATCTAAACGTTATCAATCGATCCCAATTTCCTCCTTCAAAAAGAACCCCAGCTTTTCCATCTGTGATTCTCTGAACGATTCCACAATACATGTAGTACGGATTGTTTGGATTCTTCACAATCGCAATCATTCCCGGTAGCAACAGTGGAAGATCCGGCGGCTTTGGTTTCTCTGTATTTAAAATCGAGCCGATTTCGCCGGATTTTGAAGCGGAAGGTTTCCGAGGAGGAGGATTTTCCGATATGAATTTTTTTAATCCTTTCTCTCCGCCGGGAAATCCACCGGTTAAGCCCATTAATTCCTTCTCGAATCCATCTTCTGGAACACTATCAACGGGTAATTTCGTGGAGGTTTCTGGAATTTCATTTCCATCTGCGATGACGGGATTGTCGTCGACGTTTCTCTTGAGTTCCTCTTCCACACCTCGCTCGCCATTGCAGAGGCCTCTTCCGCCTAGAAGCTGGGCTAAATCGAAAGCGGCGGAGGGCCGGAAAGCGTGATGGGTTGATGATGCGTGACGGCCGGGCAGGGGGAATGGGCGGTGGAGAAGGAGGCGGCGGCGGTTTTGGGGGAGGAAGGAGGATTTGAGAAGCGGAGTTTGAGGAGATGGAAGGGAGATTGAGGAAGCCATGGATATGACTCTACTGATTACAGAGATGAGTGTGAGACTGTGAATGTAAATTAGCCAACCCGAGAAATGGGTTTGGGTTTATCCATTTATTAAAAATAAATTTTAATTAAGTTATCTAATCTTTATTCAAATTAATTCATTTTCATGAATATAAAAACCTATTAAAATATTTAATG

mRNA sequence

TTAGAATGAGACAAAAGAAACAATATGTATAAGCTTCTTCAATTACATACAATCCAAGCATTGAGCAACTTTACACTAAAACTAAAGCAAATTGAATACAAGAAATGGACACTGACCAATTATTGCTCACCTTCTTTTCTAAAATTTAGTCATCCAAACTTTTAAATTTGTGTTGAATATTCTTTTTCTGTTAAATTTAAAATTATTAAAAACTAATATTTCTATCATATACAAAATTTTAAATATTATAATAAAACTACAAATATTTAATTTCGTGTCGATTTAACAAAAAATGATAAACAATCTTTAAGTGGAAAAATTTTCAGCCCATACTCAATGTCTAGCTGAAAAGGATATTTCTTCTATATTAACATTATGGTCTAATAAAGATGCACATTTCAAACTTTCGTGAAAAGTAAAACTCAATTAAAAAATTTCAACCGTACGTTCGATGAGATGTTTTTCAAGTAAACAATTGATTTCTACTGGACTAGGGGAAAATACCTATTTTTTGAAATTTTTTAATTATAAATTGGAATTAATCTTGATTTATATATTATGTAAATAAAGATATCAATAAATGAACTAATGAAGTAACATTTGGGCTAAATTTCCAAAACCAAAGAAAAAAGCAAACGAGGTTTGAGAGATTAAATAGGTAATTTTAAAATTTCAGGGTCAAAAAACTAAAAAATAAAAAATGTATACTTGGATGTTTAAAATTTTGGTGACTTAGTTTAGTCATAAAATTAGGAGTAAATATGTAATTAATCTTTAAAAAAATCTCTAATAACAACAACTGAAAAATGGCGTTTCTTGGATTGGAAATATTCACAAATTTTTCCAAGTTGAAATTCCAGAAGAACAAACAGATGAGATAACTACAAGGAAGAAGATAAAGAAGAAATCGCCATCACCGATCTGTTTATCATCATTGAGAATCCTTTTGAAGAAACGGTTCAAGAACAGCCGATCTAGGGTTCTTCATCGGCGGTCCTTTTTCTCTTCGTTCCAGCTCCTCCAATCTAAACGTTATCAATCGATCCCAATTTCCTCCTTCAAAAAGAACCCCAGCTTTTCCATCTGTGATTCTCTGAACGATTCCACAATACATGTAGTACGGATTGTTTGGATTCTTCACAATCGCAATCATTCCCGGTAGCAACAGTGGAAGATCCGGCGGCTTTGGTTTCTCTGTATTTAAAATCGAGCCGATTTCGCCGGATTTTGAAGCGGAAGGTTTCCGAGGAGGAGGATTTTCCGATATGAATTTTTTTAATCCTTTCTCTCCGCCGGGAAATCCACCGGTTAAGCCCATTAATTCCTTCTCGAATCCATCTTCTGGAACACTATCAACGGGTAATTTCGTGGAGGTTTCTGGAATTTCATTTCCATCTGCGATGACGGGATTGTCGTCGACGTTTCTCTTGAGTTCCTCTTCCACACCTCGCTCGCCATTGCAGAGGCCTCTTCCGCCTAGAAGCTGGGCTAAATCGAAAGCGGCGGAGGGCCGGAAAGCGTGATGGGTTGATGATGCGTGACGGCCGGGCAGGGGGAATGGGCGGTGGAGAAGGAGGCGGCGGCGGTTTTGGGGGAGGAAGGAGGATTTGAGAAGCGGAGTTTGAGGAGATGGAAGGGAGATTGAGGAAGCCATGGATATGACTCTACTGATTACAGAGATGAGTGTGAGACTGTGAATGTAAATTAGCCAACCCGAGAAATGGGTTTGGGTTTATCCATTTATTAAAAATAAATTTTAATTAAGTTATCTAATCTTTATTCAAATTAATTCATTTTCATGAATATAAAAACCTATTAAAATATTTAATG

Coding sequence (CDS)

ATGAATTTTTTTAATCCTTTCTCTCCGCCGGGAAATCCACCGGTTAAGCCCATTAATTCCTTCTCGAATCCATCTTCTGGAACACTATCAACGGGTAATTTCGTGGAGGTTTCTGGAATTTCATTTCCATCTGCGATGACGGGATTGTCGTCGACGTTTCTCTTGAGTTCCTCTTCCACACCTCGCTCGCCATTGCAGAGGCCTCTTCCGCCTAGAAGCTGGGCTAAATCGAAAGCGGCGGAGGGCCGGAAAGCGTGA

Protein sequence

MNFFNPFSPPGNPPVKPINSFSNPSSGTLSTGNFVEVSGISFPSAMTGLSSTFLLSSSSTPRSPLQRPLPPRSWAKSKAAEGRKA

Homology

[Close]

BLAST of Cmc07g0198471 vs. ExPASy TrEMBL
Match: A0A7C9ETQ9 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.6e-05
Identity = 41/83 (49.40%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 1  MNFFNPFSPPGNPPVKPINSFSNPSSGTLST--GNFVEVSGISFPSAMTGLSSTFLLSSS 60
          MN   PFSPPGNPPV+P +SFSN  SG  ST  G  V +S  S   A+        LSSS
Sbjct: 1  MNSLRPFSPPGNPPVRPNSSFSNAFSGIPSTIDGAVVVLSAFSSVLALIFGGFWSFLSSS 60

Query: 61 STPRSPLQRPLPPRSWAKSKAAE 82
            P SPL +PLPP+S  +   AE
Sbjct: 61 IRPASPLHKPLPPKSSYRLNFAE 83

[Close]

BLAST of Cmc07g0198471 vs. ExPASy TrEMBL
Match: A0A7C8YDB0 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.4e-05
Identity = 40/84 (47.62%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 1  MNFFNPFSPPGNPPVKPINSFSNPSSGTLSTGNFVEVSGISFPSAMTGLSSTF---LLSS 60
          MN   PFSPPGNPPV+P +SFSN  SG  ST +   V   +F S +  +   F    LSS
Sbjct: 1  MNSLRPFSPPGNPPVRPNSSFSNAFSGIPSTIDGAVVVLSAFSSVLALIFGGFWESFLSS 60

Query: 61 SSTPRSPLQRPLPPRSWAKSKAAE 82
          S  P SPL +PLPP+S  +   AE
Sbjct: 61 SIRPASPLHKPLPPKSSYRLNFAE 84

[Close]

BLAST of Cmc07g0198471 vs. ExPASy TrEMBL
Match: A0A0A9J2H1 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.4e-04
Identity = 39/85 (45.88%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 1  MNFFNPFSPPGNPPVKPINSFSNPSSGTLSTGNFVEVSGISFPSAMTG---LSSTFLLSS 60
          MN   P SPPG PPV+PI SFSN S  T      V V  +S      G   + +    SS
Sbjct: 1  MNSLRPTSPPGKPPVRPIISFSNASGSTAGGAASVGVESVSGEGEGAGEDVVGAGEEESS 60

Query: 61 SSTPRSPLQRPLPPRSWAKSKAAEG 83
             P SPLQRP PPR  A+ K AEG
Sbjct: 61 LRMPTSPLQRPRPPRRSARRKDAEG 85

The following BLAST results are available for this feature:

BLAST of Cmc07g0198471 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0198471 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc07g0198471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7C9ETQ9	2.6e-05	49.40	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
A0A7C8YDB0	3.4e-05	47.62	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
A0A0A9J2H1	6.4e-04	45.88	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]

BLAST of Cmc07g0198471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0198471.1	Cmc07g0198471.1	mRNA