Cmc07g0198451 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0198451
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Deoxyhypusine synthase
Location	CMiso1.1chr07: 21665364 .. 21666237 (+)
RNA-Seq Expression	Cmc07g0198451
Synteny	Cmc07g0198451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATTCTCTAAAACTCTTTGTAATAAAAAATAGTCTTCCTTGTTTTTTTTTTTAAAGCCAAACATAAAGTAATATTTAAATAGTTAGAAGCATATATCCTATAAATTCTCTCGTTTCCTTCCTCTCTCACTCTTCTTTTCTCACCTCAGTCACATTCTCAATTCCAAATTCTCCGGCCAACAATCCACGACGGTGGTGGCAACATCGTAATATTCTGCCTGGTATCAATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGAAGGGACAACGACAACAACGACAACAACGTCAACGAGGGAGATGGAAGAGAAAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAGGAATTGGAATGGCTAACGGAGCAAATCAAGGAGAAAGGAGGGAAAGGCTTAGAAGAATTGTTGGAAGAAATAGAAAGGGGAAGAAGAGAAAAATTAGAGAATTATTGTAGTATTCAATACAGTAGTGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAGAAATTACAGCAACTGATCTATTTGGTAAATCAATTGAGATACACATATATTATTGTTGGAGATGAAGGTGTTTCTTTTTCATCATCCACCTCACTCTCTTTCTCTTGCCTTTCTCCTATCAACTAGATTAATCTTTTTTTTTTTTTTTCCAAGCCCAGTTTGTAATTATACATTCTGTTCTAATTGGAGACCTTCTTTTCTCAACCTCTTGTGTTTAACCTCTCCACTTTTATGGTAAATTATTGTAAATAACTTAATTGTTTAAAAATATTTACTGTTAGTAATTTTTGTTGATAAATATCTATAATT

mRNA sequence

TTTTATTCTCTAAAACTCTTTGTAATAAAAAATAGTCTTCCTTGTTTTTTTTTTTAAAGCCAAACATAAAGTAATATTTAAATAGTTAGAAGCATATATCCTATAAATTCTCTCGTTTCCTTCCTCTCTCACTCTTCTTTTCTCACCTCAGTCACATTCTCAATTCCAAATTCTCCGGCCAACAATCCACGACGGTGGTGGCAACATCGTAATATTCTGCCTGGTATCAATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGAAGGGACAACGACAACAACGACAACAACGTCAACGAGGGAGATGGAAGAGAAAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAGGAATTGGAATGGCTAACGGAGCAAATCAAGGAGAAAGGAGGGAAAGGCTTAGAAGAATTGTTGGAAGAAATAGAAAGGGGAAGAAGAGAAAAATTAGAGAATTATTGTAGTATTCAATACAGTAGTGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAGAAATTACAGCAACTGATCTATTTGGTAAATCAATTGAGATACACATATATTATTGTTGGAGATGAAGGTGTTTCTTTTTCATCATCCACCTCACTCTCTTTCTCTTGCCTTTCTCCTATCAACTAGATTAATCTTTTTTTTTTTTTTTCCAAGCCCAGTTTGTAATTATACATTCTGTTCTAATTGGAGACCTTCTTTTCTCAACCTCTTGTGTTTAACCTCTCCACTTTTATGGTAAATTATTGTAAATAACTTAATTGTTTAAAAATATTTACTGTTAGTAATTTTTGTTGATAAATATCTATAATT

Coding sequence (CDS)

ATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGAAGGGACAACGACAACAACGACAACAACGTCAACGAGGGAGATGGAAGAGAAAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAGGAATTGGAATGGCTAACGGAGCAAATCAAGGAGAAAGGAGGGAAAGGCTTAGAAGAATTGTTGGAAGAAATAGAAAGGGGAAGAAGAGAAAAATTAGAGAATTATTGTAGTATTCAATACAGTAGTGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAG

Protein sequence

MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHMFR

Homology

[Close]

BLAST of Cmc07g0198451 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 3.2e-42
Identity = 99/111 (89.19%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKG 60
           MGNCVEVLSRQREE+G   TTTTTSTREMEE+EKKGGMRIKVVLRKEELEWLTEQIKEKG
Sbjct: 1   MGNCVEVLSRQREEDG---TTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKG 60

Query: 61  GKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHMFR 112
           GK LEELLEEIERGRREK    CSIQY +VSWKPSLESIMECPEIPDHMFR
Sbjct: 61  GKCLEELLEEIERGRREKTVMNCSIQY-NVSWKPSLESIMECPEIPDHMFR 107

[Close]

BLAST of Cmc07g0198451 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-27
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKG 60
           MGNCVEVLSR+REEEGT TTTTTT+   ME++E+KGG+RIKVVL KEEL+WL EQ++E+G
Sbjct: 1   MGNCVEVLSRRREEEGTMTTTTTTT---MEKEERKGGVRIKVVLTKEELQWLMEQVQERG 60

Query: 61  GKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 110
           GKGLEELL EIER RR+  E+         SW+PSLESIME PE+PD M
Sbjct: 61  GKGLEELLGEIERRRRKVDED--------GSWRPSLESIMEVPEVPDRM 98

[Close]

BLAST of Cmc07g0198451 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 5.2e-24
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKG 60
           MGNCVEVLSR+REEE  TTT TTT    ME++E+KG +RIKVVL KEEL+WL EQ++E+G
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTI---MEKEERKGRVRIKVVLTKEELQWLMEQVQERG 60

Query: 61  GKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 110
           GKGLEELL EIE GRR+K+           SW+PSLESIME PE+PD M
Sbjct: 61  GKGLEELLGEIE-GRRKKVN-------EDGSWRPSLESIMEVPEVPDRM 98

[Close]

BLAST of Cmc07g0198451 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-23
Identity = 72/110 (65.45%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKK-GGMRIKVVLRKEELEWLTEQIKEK 60
           MGNCVEVLSR+ EEE TTTT TTT    ME++E+K GG+RIKVVL KEEL+WL EQ++E+
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTM---MEKEERKGGGVRIKVVLTKEELQWLMEQVQER 60

Query: 61  GGKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 110
           GGKGLEELL EIE GRR+K+           SW+PSLESIME PE+PD M
Sbjct: 61  GGKGLEELLGEIE-GRRKKVN-------EDGSWRPSLESIMEVPEVPDRM 99

[Close]

BLAST of Cmc07g0198451 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22
Identity = 71/110 (64.55%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKK-GGMRIKVVLRKEELEWLTEQIKEK 60
           MGNCVEVLSR+ EEE TTTT TTT    ME++E+K GG+RIKVVL KEEL+WL EQ++E+
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTM---MEKEERKGGGVRIKVVLTKEELQWLMEQVQER 60

Query: 61  GGKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 110
           GGKGLEELL EIE GRR+K+           SW+PSLESIME PE+ D M
Sbjct: 61  GGKGLEELLGEIE-GRRKKVN-------EDGSWRPSLESIMEVPEVLDRM 99

[Close]

BLAST of Cmc07g0198451 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 99/111 (89.19%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKG 60
           MGNCVEVLSRQREE+G   TTTTTSTREMEE+EKKGGMRIKVVLRKEELEWLTEQIKEKG
Sbjct: 1   MGNCVEVLSRQREEDG---TTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKG 60

Query: 61  GKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHMFR 112
           GK LEELLEEIERGRREK    CSIQY +VSWKPSLESIMECPEIPDHMFR
Sbjct: 61  GKCLEELLEEIERGRREKTVMNCSIQY-NVSWKPSLESIMECPEIPDHMFR 107

[Close]

BLAST of Cmc07g0198451 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-24
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKG 60
           MGNCVEVLSR+REEE  TTT TTT    ME++E+KG +RIKVVL KEEL+WL EQ++E+G
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTI---MEKEERKGRVRIKVVLTKEELQWLMEQVQERG 60

Query: 61  GKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 110
           GKGLEELL EIE GRR+K+           SW+PSLESIME PE+PD M
Sbjct: 61  GKGLEELLGEIE-GRRKKVN-------EDGSWRPSLESIMEVPEVPDRM 98

[Close]

BLAST of Cmc07g0198451 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.9e-20
Identity = 65/115 (56.52%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKG 60
           MGNCVE + +  E              E E+KE KGGMRIKVVL KEELEWL E I E+G
Sbjct: 1   MGNCVEAVWKPEE------------AAEEEKKEMKGGMRIKVVLTKEELEWLMEHINERG 60

Query: 61  GKGLEELLEE--IERGRR-EKLENYCSIQY-SSVSWKPSLESIMECPEIPDHMFR 112
           G+ LE+LLEE  IERGRR  K+ +  ++ + +S SWKPSLESI+ECPE+PDHM R
Sbjct: 61  GRNLEDLLEEIQIERGRRSRKVISREALDFNTSASWKPSLESIVECPELPDHMQR 103

[Close]

BLAST of Cmc07g0198451 vs. ExPASy TrEMBL
Match: A0A5N5GYR2 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039523 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-12
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREMEEKEKK------------GGMRIKVVLRKEE 60
           MGNCVE   +++E+E           +E +E+E K            G +R+K+VL KEE
Sbjct: 1   MGNCVETCKQKQEQEDGQMQQQQQHEQEDDERENKDRFVKEQNLGKDGNIRVKIVLSKEE 60

Query: 61  LEWLTEQIKEKGGKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEI 106
           LEWL  Q+K+ GGK LE++L+EI++ R + +E           WKPSLESIMECPE+
Sbjct: 61  LEWLMLQLKDSGGKNLEDVLQEIQKSRAKAIE----------GWKPSLESIMECPEV 107

[Close]

BLAST of Cmc07g0198451 vs. ExPASy TrEMBL
Match: A0A498I987 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_040072 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-12
Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 1   MGNCVEVL-SRQREEEGTTTTTTTTSTREMEEKEKK------------GGMRIKVVLRKE 60
           MGNCVE    +Q +E+G          +E +E+E K            G +R+K+VL KE
Sbjct: 1   MGNCVETCKQKQEQEDGQMQQQQQQHEQEDDERENKDRFMKEQNLGKDGNIRVKIVLSKE 60

Query: 61  ELEWLTEQIKEKGGKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEI 106
           ELEWL  Q+K+ GGK LE++L+EI++ R + +E           WKPSLESIMECPE+
Sbjct: 61  ELEWLMLQLKDSGGKNLEDVLQEIQKSRAKAIE----------GWKPSLESIMECPEV 108

[Close]

BLAST of Cmc07g0198451 vs. TAIR 10
Match: AT1G64405.1 (unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.5e-05
Identity = 35/116 (30.17%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 1   MGNCVEVLSRQREEEGTTTTTTTTSTREM----EEKEKKGGMRIKVVLRKEELEWLTEQI 60
           MGNC+E   +   EEG    T            + ++  GGM++K+VL + EL+    Q+
Sbjct: 1   MGNCMERWMQGEGEEGKIEVTERAKESFKLDGDDNEDGHGGMKVKIVLTRHELDMFLLQM 60

Query: 61  KEKGGKGL---EELLEEIERGRREKLENYCSIQY--SSVSWKPSLESIMECPEIPD 108
                  L   ++++ E+E+ R  +  ++ S+    SS++W+P+LESI+ECPE+ +
Sbjct: 61  NRSHDGNLMITKDVMVELEK-RIIRASSFSSLSSSPSSIAWEPALESILECPEVQE 115

The following BLAST results are available for this feature:

BLAST of Cmc07g0198451 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53406.1	3.2e-42	89.19	hypothetical protein Csa_015211 [Cucumis sativus]	[more]
XP_023543788.1	5.0e-27	67.89	uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]	[more]
XP_022942038.1	5.2e-24	65.14	uncharacterized protein LOC111447226 [Cucurbita moschata]	[more]
KAG6600517.1	2.0e-23	65.45	hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031156.1	2.8e-22	64.55	hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cmc07g0198451 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0198451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZU9	1.6e-42	89.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1	[more]
A0A6J1FTR3	2.5e-24	65.14	uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC1114472...	[more]
A0A6J1C443	4.9e-20	56.52	uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A5N5GYR2	1.3e-12	41.88	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A498I987	2.9e-12	42.37	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_040072 PE=4 SV=1	[more]

BLAST of Cmc07g0198451 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64405.1	1.5e-05	30.17	unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR35704	OS02G0254600 PROTEIN	coord: 1..109
None	No IPR available	PANTHER	PTHR35704:SF1	OS02G0254600 PROTEIN	coord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0198451.1	Cmc07g0198451.1	mRNA