Cmc07g0196881 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0196881
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr07: 20129964 .. 20132050 (+)
RNA-Seq ExpressionCmc07g0196881
SyntenyCmc07g0196881
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCAACCCCTTTCCTTTTCCTTCTTACTTTGAATACCATCTTTATTTACTCTCCTACCATTACCTAACAACACCCTATGCGCCGCCGCCATCCTTCCTCGACTTCCAATGGAGACCCTGACTTTCTCCATCCCTACAGTGATACCGCCTCGTCTCATGTGTTGTTGCATTGGAGACTTCATTTTTATCTTCTTCTGAAGGCTTCGTCTCAACATGTTGCTCAACTTTTTGCCTCCATATTTTATCTCTTTAGGACTGTCACACTGCACCTGTTCAGGGAAGCAGTTACTATCATCCGATCCGTTGACTTCGTCTATCTTGTCGGCGGCTAATGTCAACATGGGTGATGGGAGATGAGCGGAGCTTGGTATGCTTGGTAGTGGGATTAGGGAGTTTCTCCTAGGAGCGAGGGTCGTCGGTACACGTCGGGCCATTGTGCAAATAGATGCTCTTCCTGTTCTCTTCGGTGGCACAAAACATCGTTCAACCATCTCTGGATTGTTCTCCTTCTCTGCGGAATCAGTGTACTTGGTGGCACCATCCACTGGAGGAAAGGGAAATGATGGTTTGAAGCCATTGTTTTCAGTTAGTGGATGAGTGAGATTTGTTTGCTCCTTTCCAAGTATGTTGTTAAATGGTCCATGTAGATTTTTTTGACTACCTACTAATGGTCGAGTTGCAAGTTGTGGCCTCAATGGTGCAGACTTATGATCTTCTGATTCGGTTTTCATTTGCTGTTCTGCTATTTTGGCGTCAACATGCTGACGTGCTAACTTTCTTTCAACAAGAAGTTGAGCTTCAAGTTCTTTGACCTGTAATGAGCTCACAAAATCAGCACAAGAATATGGTTTGGGTTTCTCTTAAGTCAATATAAAAATTCTATTACCTTGTCTTGAAGACTTCTGTTCTTCTGATCTTTTTCCTTCATCTTCAAGTCTAATCCATGAATTGTTTCTTCCATTTTTCTTATCTGTAGATCTTTACTCTTCATATCCTGTTTTGTTTTCTCAGTCTAACACAAGCAATGCATGAACGACACTTGAGAACAATAATACAAAGACACGAATAACGGTACAACACTACTTAAAAACATGAAACCAAACAGGGTAGTGAAGCTTTTACCATCTGTTTGCATTTAAGGAATTCAGACATATCAAGCTGTCTCTTTGCAGGTCCCAACTCAATTCCTCTTACTCTGCTAGCAAAGTTCAATGAGCAAAGAGTCTCATTCAAGTCATTTTCGTTGGGACTGATCTGTACGAACATGAGTGTCTTTGAATCTCCCCCTAACGATAGGGATTCCATTTATCAATAAAGCCATAAGCAATGTATTTTATGTAATATAGCACAAAAGATACACTACCTAGTGAATCTTGAAGCAAGTGAGTGAGCTTGGAGTTCCTGCCAAGAGTCGAGAACGAAGGAAGACAGGATGGCGGTTATTTGCAAGTCCTGAGATAACATAACAGCAGAACAGTCCAAATCTTATTTACCTGAAAGGAACATGTGGGCTTTTTGTTGCAAGAGCAGATATTACATCGCCAAGTGCGGAAAGAGATCTATTAATATTTTGTGTTTCTTTGAGTCGTTCAACCTGTACTTCTACTTTGGCAATTCGCTCGCTACCTGCCAAGTCCACCAACCACAATTTGCTGCTAGTGCATTCCCCATTTAGCAAATTCTCCCCCTTCACCATCACACAATGTATGCTGTTTGTGAAGAAACAACCAAAATCACATATTCAGCATGATGACATCCTTTTACTATGTAAACCAAATGTAAAAGAGATAGACATACCAGTGGGATCGGCTGCTGTGCTCATTACAATTGGTCGAACCAACAGCTCTTGCATTACTGCCAGTTTGTAGAACTTCCCAAACTTCATTCATGTTGTCGACAGGGGCCTCAACCATACCAGGAACATGATGTATTCCTTCACTAATTTGTCGAACTTCGAGCCTGAAATAATATATGAAAGTGAAAATTTTCACTATGGGACATAGTAGTATCTAACTTACCCTTCCTTTAACTAATAATCAACAATTATCATAGGGTAGATATAACAGAAGGCCAAAAAAAATTTACTT

mRNA sequence

TTCCAACCCCTTTCCTTTTCCTTCTTACTTTGAATACCATCTTTATTTACTCTCCTACCATTACCTAACAACACCCTATGCGCCGCCGCCATCCTTCCTCGACTTCCAATGGAGACCCTGACTTTCTCCATCCCTACAGTGATACCGCCTCGTCTCATGTGTTGTTGCATTGGAGACTTCATTTTTATCTTCTTCTGAAGGCTTCGTCTCAACATGTTGCTCAACTTTTTGCCTCCATATTTTATCTCTTTAGGACTGTCACACTGCACCTGTTCAGGGAAGCAGTTACTATCATCCGATCCGTTGACTTCGTCTATCTTGTCGGCGGCTAATGTCAACATGGGTGATGGGAGATGAGCGGAGCTTGGTATGCTTGGTAGTGGGATTAGGGAGTTTCTCCTAGGAGCGAGGGTCGTCGGTACACGTCGGGCCATTGTGCAAATAGATGCTCTTCCTGTTCTCTTCGGTGGCACAAAACATCGTTCAACCATCTCTGGATTGTTCTCCTTCTCTGCGGAATCAGTGTACTTGGTGGCACCATCCACTGGAGGAAAGGGAAATGATGGTTTGAAGCCATTGTTTTCAGTTAGTGGATGAGTGAGATTTGTTTGCTCCTTTCCAAGTATGTTGTTAAATGGTCCATGTAGATTTTTTTGACTACCTACTAATGGTCGAGTTGCAAGTTGTGGCCTCAATGGTGCAGACTTATGATCTTCTGATTCGGTTTTCATTTGCTGTTCTGCTATTTTGGCGTCAACATGCTGACGTGCTAACTTTCTTTCAACAAGAAGTTGAGCTTCAAGTTCTTTGACCTGTAATGAGCTCACAAAATCAGCACAAGAATATGTCTAACACAAGCAATGCATGAACGACACTTGAGAACAATAATACAAAGACACGAATAACGGTCCCAACTCAATTCCTCTTACTCTGCTAGCAAAGTTCAATGAGCAAAGAGTCTCATTCAAGTCATTTTCGTTGGGACTGATCTGTACGAACATGAGTGTCTTTGAATCTCCCCCTAACGATAGGGATTCCATTTATCAATAAAGCCATAAGCAATGTATTTTATGTAATATAGCACAAAAGATACACTACCTAGTGAATCTTGAAGCAAGTGAGTGAGCTTGGAGTTCCTGCCAAGAGTCGAGAACGAAGGAAGACAGGATGGCGGTTATTTGCAAGTCCTGAGATAACATAACAGCAGAACAGTCCAAATCTTATTTACCTGAAAGGAACATGTGGGCTTTTTGTTGCAAGAGCAGATATTACATCGCCAAGTGCGGAAAGAGATCTATTAATATTTTGTGTTTCTTTGAGTCGTTCAACCTGTACTTCTACTTTGGCAATTCGCTCGCTACCTGCCAAGTCCACCAACCACAATTTGCTGCTAGTGCATTCCCCATTTAGCAAATTCTCCCCCTTCACCATCACACAATGTATGCTGTTTGTGAAGAAACAACCAAAATCACATATTCAGCATGATGACATCCTTTTACTATGTAAACCAAATGTAAAAGAGATAGACATACCAGTGGGATCGGCTGCTGTGCTCATTACAATTGGTCGAACCAACAGCTCTTGCATTACTGCCAGTTTGTAGAACTTCCCAAACTTCATTCATGTTGTCGACAGGGGCCTCAACCATACCAGGAACATGATGTATTCCTTCACTAATTTGTCGAACTTCGAGCCTGAAATAATATATGAAAGTGAAAATTTTCACTATGGGACATAGTAGTATCTAACTTACCCTTCCTTTAACTAATAATCAACAATTATCATAGGGTAGATATAACAGAAGGCCAAAAAAAATTTACTT

Coding sequence (CDS)

ATGCTTGGTAGTGGGATTAGGGAGTTTCTCCTAGGAGCGAGGGTCGTCGGTACACGTCGGGCCATTGTGCAAATAGATGCTCTTCCTGTTCTCTTCGGTGGCACAAAACATCGTTCAACCATCTCTGGATTGTTCTCCTTCTCTGCGGAATCAGTGTACTTGGTGGCACCATCCACTGGAGGAAAGGGAAATGATGGTTTGAAGCCATTGTTTTCAGTTAGTGGATGA

Protein sequence

MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSAESVYLVAPSTGGKGNDGLKPLFSVSG
Homology
[Close]
BLAST of Cmc07g0196881 vs. NCBI nr
Match: KAF2286186.1 (hypothetical protein GH714_011493 [Hevea brasiliensis])

HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06
Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 1  MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSAESVYLVAPSTG 60
          MLG GI E  LGA  +  R A+VQI+ALPVLFG     S ISGLFSFS  S++L  P + 
Sbjct: 32 MLGRGISEVRLGAGAIEIRCAVVQIEALPVLFGNAS-CSVISGLFSFSVGSIHLAMPPSV 91

Query: 61 GKGNDGL 68
           +G+ GL
Sbjct: 92 RRGHVGL 97

[Close]
BLAST of Cmc07g0196881 vs. ExPASy TrEMBL
Match: A0A6A6KDG7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_011493 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.2e-07
Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 1  MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSAESVYLVAPSTG 60
          MLG GI E  LGA  +  R A+VQI+ALPVLFG     S ISGLFSFS  S++L  P + 
Sbjct: 32 MLGRGISEVRLGAGAIEIRCAVVQIEALPVLFGNAS-CSVISGLFSFSVGSIHLAMPPSV 91

Query: 61 GKGNDGL 68
           +G+ GL
Sbjct: 92 RRGHVGL 97

The following BLAST results are available for this feature:
BLAST of Cmc07g0196881 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF2286186.11.5e-0653.73hypothetical protein GH714_011493 [Hevea brasiliensis][more]
BLAST of Cmc07g0196881 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc07g0196881 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A6KDG77.2e-0753.73Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_011493 PE=4 SV=1[more]
BLAST of Cmc07g0196881 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0196881.1Cmc07g0196881.1mRNA