Cmc07g0196421 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0196421
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	50S ribosomal protein L22, chloroplastic
Location	CMiso1.1chr07: 19693918 .. 19694409 (+)
RNA-Seq Expression	Cmc07g0196421
Synteny	Cmc07g0196421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAAGAAGAGAAAAAAAAATCAATCTGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTGTGAATAAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGGTTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAATAA

mRNA sequence

ATGATAAAGAAGAGAAAAAAAAATCAATCTGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTGTGAATAAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGGTTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAATAA

Coding sequence (CDS)

ATGATAAAGAAGAGAAAAAAAAATCAATCTGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTGTGAATAAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGGTTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAATAA

Protein sequence

MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

Homology

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BLAST of Cmc07g0196421 vs. NCBI nr
Match: YP_004841823.1 (ribosomal protein L22 [Cucumis melo subsp. melo] >YP_009860113.1 ribosomal protein L22 [Cucumis melo subsp. agrestis] >ASY96588.1 ribosomal protein L22 [Cucumis melo var. conomon] >ASY96675.1 ribosomal protein L22 [Cucumis melo var. makuwa] >ASY96762.1 ribosomal protein L22 [Cucumis melo var. momordica] >ASY96849.1 ribosomal protein L22 [Cucumis melo var. dudaim] >ASY96936.1 ribosomal protein L22 [Cucumis melo var. cantalupo] >ASY97110.1 ribosomal protein L22 [Cucumis melo var. inodorus] >ASY97284.1 ribosomal protein L22 [Cucumis melo var. flexuosus] >QJF46424.1 ribosomal protein L22 [Cucumis melo])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV
Sbjct: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Sbjct: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Sbjct: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 163

[Close]

BLAST of Cmc07g0196421 vs. NCBI nr
Match: ASY96327.1 (ribosomal protein L22 [Cucumis melo subsp. agrestis])

HSP 1 Score: 331.6 bits (849), Expect = 3.7e-87
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV
Sbjct: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Sbjct: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VNKEEF+RYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Sbjct: 121 VNKEEFQRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 163

[Close]

BLAST of Cmc07g0196421 vs. NCBI nr
Match: ABI97456.1 (ribosomal protein L22 [Cucumis sativus] >AVE15371.1 ribosomal protein L22 [Cucumis sativus var. sativus] >ABI98785.1 ribosomal protein L22 [Cucumis sativus] >ARQ16118.1 ribosomal protein L22 [Cucumis sativus] >ARQ16201.1 ribosomal protein L22 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 153/169 (90.53%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MIKKR------KKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCY 60
           MIKKR      KKN+ EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYR CY
Sbjct: 1   MIKKRKNMIKTKKNRYEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACY 60

Query: 61  AILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITI 120
            ILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRA+GRSYPIKRPTCSITI
Sbjct: 61  PILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRAQGRSYPIKRPTCSITI 120

Query: 121 VLKNTSVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VLKNTSVN+EEFKRYQYTIN+PGGLITKEKYTDM CY+MY NGGLWDKK
Sbjct: 121 VLKNTSVNEEEFKRYQYTINQPGGLITKEKYTDMRCYDMYNNGGLWDKK 169

[Close]

BLAST of Cmc07g0196421 vs. NCBI nr
Match: YP_009004082.1 (ribosomal protein L22 [Cucumis hystrix] >YP_247639.1 ribosomal protein L22 [Cucumis sativus] >Q4VZM9.1 RecName: Full=50S ribosomal protein L22, chloroplastic [Cucumis sativus] >ALF03341.1 ribosomal protein L22 [Cucumis sativus var. hardwickii] >AAZ94689.1 ribosomal protein L22 [Cucumis sativus] >AHJ61424.1 ribosomal protein L22 [Cucumis hystrix] >ANF28416.1 ribosomal protein L22 [Cucumis sativus var. hardwickii] >ASY97457.1 ribosomal protein L22 [Cucumis sativus var. hardwickii])

HSP 1 Score: 307.8 bits (787), Expect = 5.7e-80
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 4   KRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSA 63
           K KKN+ EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYR CY ILKLVYSA
Sbjct: 3   KTKKNRYEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSA 62

Query: 64  AANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSVNK 123
           AANASHNMGFNERDLVISKAEVNQGTTVKKLKPRA+GRSYPIKRPTCSITIVLKNTSVN+
Sbjct: 63  AANASHNMGFNERDLVISKAEVNQGTTVKKLKPRAQGRSYPIKRPTCSITIVLKNTSVNE 122

Query: 124 EEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           EEFKRYQYTIN+PGGLITKEKYTDM CY+MY NGGLWDKK
Sbjct: 123 EEFKRYQYTINQPGGLITKEKYTDMRCYDMYNNGGLWDKK 162

[Close]

BLAST of Cmc07g0196421 vs. NCBI nr
Match: YP_009456185.1 (ribosomal protein L22 [Lagenaria siceraria] >QNM38570.1 ribosomal protein L22 [Lagenaria siceraria var. microcarpa] >AHM88708.1 ribosomal protein L22 [Lagenaria siceraria] >AHM88998.1 ribosomal protein L22 [Lagenaria siceraria] >AHM89057.1 ribosomal protein L22 [Lagenaria siceraria] >AHM89116.1 ribosomal protein L22 [Lagenaria siceraria])

HSP 1 Score: 305.4 bits (781), Expect = 2.8e-79
Identity = 153/167 (91.62%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MIKKRKKNQ-SEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKL 60
           MIKK KKN+ +EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYR CY ILKL
Sbjct: 1   MIKKIKKNRYTEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKL 60

Query: 61  VYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT 120
           VYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT
Sbjct: 61  VYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT 120

Query: 121 SVNKEEFKRYQYTI---NKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           S+N+EEFKRYQYTI   NKPGG ITKEKYTDMTCY+MY NGGLWDKK
Sbjct: 121 SLNEEEFKRYQYTILDLNKPGGWITKEKYTDMTCYDMYNNGGLWDKK 167

[Close]

BLAST of Cmc07g0196421 vs. ExPASy Swiss-Prot
Match: Q4VZM9 (50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.5e-83
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 4   KRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSA 63
           K KKN+ EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYR CY ILKLVYSA
Sbjct: 3   KTKKNRYEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSA 62

Query: 64  AANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSVNK 123
           AANASHNMGFNERDLVISKAEVNQGTTVKKLKPRA+GRSYPIKRPTCSITIVLKNTSVN+
Sbjct: 63  AANASHNMGFNERDLVISKAEVNQGTTVKKLKPRAQGRSYPIKRPTCSITIVLKNTSVNE 122

Query: 124 EEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           EEFKRYQYTIN+PGGLITKEKYTDM CY+MY NGGLWDKK
Sbjct: 123 EEFKRYQYTINQPGGLITKEKYTDMRCYDMYNNGGLWDKK 162

[Close]

BLAST of Cmc07g0196421 vs. ExPASy Swiss-Prot
Match: A6MM76 (50S ribosomal protein L22, chloroplastic OS=Buxus microphylla OX=153571 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 6.4e-58
Identity = 118/163 (72.39%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKK +   +EVYALGQHICMS HKARRVIDQIRGRSYEE +MILELMPYR CY I KLV
Sbjct: 1   MIKKNR--DAEVYALGQHICMSAHKARRVIDQIRGRSYEEALMILELMPYRACYPIFKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNE D VISKAEVN GT+VKKLKPRARGRSY IKRPTC ITIVLK+  
Sbjct: 61  YSAAANASHNMGFNEADSVISKAEVNDGTSVKKLKPRARGRSYLIKRPTCHITIVLKDIY 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           ++    ++Y   + K  G I + KYTDMTC +MY +GG+WDKK
Sbjct: 121 LD----EKYIIWLRK-YGWIYRNKYTDMTCRDMYGSGGVWDKK 156

[Close]

BLAST of Cmc07g0196421 vs. ExPASy Swiss-Prot
Match: Q49KV9 (50S ribosomal protein L22, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-56
Identity = 119/164 (72.56%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 1   MIKKRKKN-QSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKL 60
           M KKR KN   EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYR CY I KL
Sbjct: 1   MRKKRNKNLYGEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKL 60

Query: 61  VYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT 120
           VYSAAANASHNMGFNE  LVISKAEVN+GTT+KKLKPRARGRSY IKRPTC I IVLK+ 
Sbjct: 61  VYSAAANASHNMGFNEASLVISKAEVNEGTTMKKLKPRARGRSYAIKRPTCHIRIVLKDK 120

Query: 121 SVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           S  +EE     +   K      K+KYTDMT + M   GGLWDKK
Sbjct: 121 SFYEEE----NFFCLKQSEWKKKKKYTDMTYHYMDKGGGLWDKK 160

[Close]

BLAST of Cmc07g0196421 vs. ExPASy Swiss-Prot
Match: P56795 (50S ribosomal protein L22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.0e-56
Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 1   MIKKR-KKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKL 60
           MIKKR KK+ +EVYALGQ+I MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KL
Sbjct: 1   MIKKRKKKSYTEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKL 60

Query: 61  VYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT 120
           VYSAAANASHN GF E +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL++ 
Sbjct: 61  VYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDI 120

Query: 121 SVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           S   ++++ Y   + KPG      +  ++TCY+ Y++GGLWDKK
Sbjct: 121 SF-YQQYEEYLMYLKKPG---CSNENRNLTCYDTYSSGGLWDKK 160

[Close]

BLAST of Cmc07g0196421 vs. ExPASy Swiss-Prot
Match: A4QJX0 (50S ribosomal protein L22, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.3e-55
Identity = 113/164 (68.90%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 1   MIKKR-KKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKL 60
           MIKKR KK+ + VYALGQ+I MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KL
Sbjct: 1   MIKKRKKKSYTSVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKL 60

Query: 61  VYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT 120
           VYSAAANASHN GF E +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL++ 
Sbjct: 61  VYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDI 120

Query: 121 SVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           S   ++++ Y   + KPG    + +  ++TCY+ Y++GGLWDKK
Sbjct: 121 SF-YQQYEEYLMYLKKPG---CRNENRNLTCYDTYSSGGLWDKK 160

[Close]

BLAST of Cmc07g0196421 vs. ExPASy TrEMBL
Match: A0A1S4EU49 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.2e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV
Sbjct: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Sbjct: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Sbjct: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 163

[Close]

BLAST of Cmc07g0196421 vs. ExPASy TrEMBL
Match: A0A249RZ70 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.2e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV
Sbjct: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Sbjct: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Sbjct: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 163

[Close]

BLAST of Cmc07g0196421 vs. ExPASy TrEMBL
Match: A0A249RXQ3 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.2e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV
Sbjct: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Sbjct: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Sbjct: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 163

[Close]

BLAST of Cmc07g0196421 vs. ExPASy TrEMBL
Match: A0A286NFP5 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.2e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV
Sbjct: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Sbjct: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Sbjct: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 163

[Close]

BLAST of Cmc07g0196421 vs. ExPASy TrEMBL
Match: A0A249RYZ8 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=rpl22 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.2e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV
Sbjct: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
Sbjct: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120

Query: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Sbjct: 121 VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 163

[Close]

BLAST of Cmc07g0196421 vs. TAIR 10
Match: ATCG00810.1 (ribosomal protein L22 )

HSP 1 Score: 218.4 bits (555), Expect = 4.3e-57
Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 1   MIKKR-KKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKL 60
           MIKKR KK+ +EVYALGQ+I MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KL
Sbjct: 1   MIKKRKKKSYTEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKL 60

Query: 61  VYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNT 120
           VYSAAANASHN GF E +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL++ 
Sbjct: 61  VYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDI 120

Query: 121 SVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK 164
           S   ++++ Y   + KPG      +  ++TCY+ Y++GGLWDKK
Sbjct: 121 SF-YQQYEEYLMYLKKPG---CSNENRNLTCYDTYSSGGLWDKK 160

[Close]

BLAST of Cmc07g0196421 vs. TAIR 10
Match: AT1G52370.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-12
Identity = 39/124 (31.45%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           +I KR+K Q+ + ++ Q    SP K   V   +RG   E+ +M L++   R    + +++
Sbjct: 99  IIPKRQKVQAVLKSIKQ----SPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVI 158

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           ++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+
Sbjct: 159 HAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETT 218

Query: 121 VNKE 125
             +E
Sbjct: 219 AEEE 218

[Close]

BLAST of Cmc07g0196421 vs. TAIR 10
Match: AT1G52370.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-12
Identity = 39/124 (31.45%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           +I KR+K Q+ + ++ Q    SP K   V   +RG   E+ +M L++   R    + +++
Sbjct: 99  IIPKRQKVQAVLKSIKQ----SPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVI 158

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           ++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+
Sbjct: 159 HAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETT 218

Query: 121 VNKE 125
             +E
Sbjct: 219 AEEE 218

[Close]

BLAST of Cmc07g0196421 vs. TAIR 10
Match: AT1G52370.3 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-12
Identity = 39/124 (31.45%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           +I KR+K Q+ + ++ Q    SP K   V   +RG   E+ +M L++   R    + +++
Sbjct: 99  IIPKRQKVQAVLKSIKQ----SPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVI 158

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           ++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+
Sbjct: 159 HAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETT 218

Query: 121 VNKE 125
             +E
Sbjct: 219 AEEE 218

[Close]

BLAST of Cmc07g0196421 vs. TAIR 10
Match: AT4G28360.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 67.8 bits (164), Expect = 9.3e-12
Identity = 38/124 (30.65%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 1   MIKKRKKNQSEVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLV 60
           +I KR+K Q+ + ++ Q    SP K   V   +RG   E+ ++ L++   R    + +++
Sbjct: 100 IIPKRQKVQAVLKSIKQ----SPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVI 159

Query: 61  YSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS 120
           ++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+
Sbjct: 160 HAARANATHNHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETT 219

Query: 121 VNKE 125
             +E
Sbjct: 220 PEEE 219

The following BLAST results are available for this feature:

BLAST of Cmc07g0196421 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841823.1	1.3e-87	100.00	ribosomal protein L22 [Cucumis melo subsp. melo] >YP_009860113.1 ribosomal prote...	[more]
ASY96327.1	3.7e-87	99.39	ribosomal protein L22 [Cucumis melo subsp. agrestis]	[more]
ABI97456.1	2.6e-80	90.53	ribosomal protein L22 [Cucumis sativus] >AVE15371.1 ribosomal protein L22 [Cucum...	[more]
YP_009004082.1	5.7e-80	93.13	ribosomal protein L22 [Cucumis hystrix] >YP_247639.1 ribosomal protein L22 [Cucu...	[more]
YP_009456185.1	2.8e-79	91.62	ribosomal protein L22 [Lagenaria siceraria] >QNM38570.1 ribosomal protein L22 [L...	[more]

BLAST of Cmc07g0196421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZM9	7.5e-83	93.13	50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl22 PE=...	[more]
A6MM76	6.4e-58	72.39	50S ribosomal protein L22, chloroplastic OS=Buxus microphylla OX=153571 GN=rpl22...	[more]
Q49KV9	1.2e-56	72.56	50S ribosomal protein L22, chloroplastic OS=Eucalyptus globulus subsp. globulus ...	[more]
P56795	6.0e-56	69.51	50S ribosomal protein L22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rpl2...	[more]
A4QJX0	1.3e-55	68.90	50S ribosomal protein L22, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN=r...	[more]

BLAST of Cmc07g0196421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4EU49	6.2e-88	100.00	50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=rpl22 PE=3 S...	[more]
A0A249RZ70	6.2e-88	100.00	50S ribosomal protein L22, chloroplastic OS=Cucumis melo var. cantalupensis OX=3...	[more]
A0A249RXQ3	6.2e-88	100.00	50S ribosomal protein L22, chloroplastic OS=Cucumis melo subsp. agrestis OX=2176...	[more]
A0A286NFP5	6.2e-88	100.00	50S ribosomal protein L22, chloroplastic OS=Cucumis melo var. flexuosus OX=11207...	[more]
A0A249RYZ8	6.2e-88	100.00	50S ribosomal protein L22, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 ...	[more]

BLAST of Cmc07g0196421 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00810.1	4.3e-57	69.51	ribosomal protein L22	[more]
AT1G52370.1	2.4e-12	31.45	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.2	2.4e-12	31.45	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.3	2.4e-12	31.45	Ribosomal protein L22p/L17e family protein	[more]
AT4G28360.1	9.3e-12	30.65	Ribosomal protein L22p/L17e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 16..117 e-value: 9.1E-28 score: 96.5
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 12..116 e-value: 9.95587E-39 score: 125.681
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	TIGRFAM	TIGR01044	TIGR01044	coord: 17..115 e-value: 3.9E-28 score: 95.7
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	PANTHER	PTHR13501	CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED	coord: 3..129
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	HAMAP	MF_01331_B	Ribosomal_L22_B	coord: 10..119 score: 25.211523
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	3.90.470.10	Ribosomal protein L22/L17	coord: 6..137 e-value: 2.6E-44 score: 152.4
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	54843	Ribosomal protein L22	coord: 5..118
None	No IPR available	PANTHER	PTHR13501:SF10	39S RIBOSOMAL PROTEIN L22, MITOCHONDRIAL-RELATED	coord: 3..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0196421.1	Cmc07g0196421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome