Cmc07g0196221 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0196221
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr07: 19581863 .. 19583155 (-)
RNA-Seq ExpressionCmc07g0196221
SyntenyCmc07g0196221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTCAAGATAGCCTTTTTGAACGGTAATCTTGAGGAGAGTATTTATATGGTCCAACCAGAGGGGTTGATACAAAAGGGTCAAGAACAAAAGGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACAAGCATCCAGATCCTGGAATATAAGGTTTGATAATGCGATCAAATCTTATGGTTTTAAACAAAATGTTGAAGAACCTTGTGTTTACAAAAGGATCACCAATTCTACTGTAGCATTCTTAGTTCTGTATGTAGATGAAATTCTACTCATTGGGAATGATGTAGATCGTCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTGGTATCCAAACAGTTCGAAACCGAAAAAACAAAACACTAACCATGTCTCAAACATCTTATATAGACATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGTTGTCGTACAGATATGAAATTCATTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGTTGTCGTACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAAAAGTTGAGGATATAAGTAACATTCCCTATGCTTCTACTGTTAGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAATAGGGATAATTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGATCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGGTAGAAAGTCCACATCAGGATCAGTTTTCACTCTAAATGGAGGAGGAGTAGTGTGGAGAAGCATAAAACAATCCTGTATTGCCGAGTCCACTATGGAAGCTGAATATGTAGCTGCTTGTGAAGCAGCAAAGGAAGCAGTATGGCTTAAAAAGTTCTTAATAGATTTGGAAGTTGTTCCAAATATGCATTTGTCAATCACCTTATACTGTGACAACAGTGATGTAGTTACAAATTCACGAGAACCTTTAAGTCATAAACGAGGAAAACACATTGAACAAAAGTACCATATGATCAGGAAAATCGTACATCGAGGAGATGTTACTGTAACAAAAATCTCCTCTGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGCTATCTACATGGTTTAGGTCTGTTTGATTTGTAA

mRNA sequence

ATGGATGTCAAGATAGCCTTTTTGAACGGTAATCTTGAGGAGAGTATTTATATGGTCCAACCAGAGGGGTTGATACAAAAGGGTCAAGAACAAAAGGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACAAGCATCCAGATCCTGGAATATAAGGTTTGATAATGCGATCAAATCTTATGGTTTTAAACAAAATGTTGAAGAACCTTGTGTTTACAAAAGGATCACCAATTCTACTGTAGCATTCTTAGTTCTGTATGTAGATGAAATTCTACTCATTGGGAATGATGTAGATCGTCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTGGTATCCAAACAGTTCGAAACCGAAAAAACAAAACACTAACCATGTCTCAAACATCTTATATAGACATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGTTGTCGTACAGATATGAAATTCATTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGTTGTCGTACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAAAAGTTGAGGATATAAGTAACATTCCCTATGCTTCTACTGTTAGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAATAGGGATAATTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGATCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGGTAGAAAGTCCACATCAGGATCAGTTTTCACTCTAAATGGAGGAGGAGTAGTGTGGAGAAGCATAAAACAATCCTGTATTGCCGAGTCCACTATGGAAGCTGAATATGTAGCTGCTTGTGAAGCAGCAAAGGAAGCAGTATGGCTTAAAAAGTTCTTAATAGATTTGGAAGTTGTTCCAAATATGCATTTGTCAATCACCTTATACTGTGACAACAGTGATGTAGTTACAAATTCACGAGAACCTTTAAGTCATAAACGAGGAAAACACATTGAACAAAAGTACCATATGATCAGGAAAATCGTACATCGAGGAGATGTTACTGTAACAAAAATCTCCTCTGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGCTATCTACATGGTTTAGGTCTGTTTGATTTGTAA

Coding sequence (CDS)

ATGGATGTCAAGATAGCCTTTTTGAACGGTAATCTTGAGGAGAGTATTTATATGGTCCAACCAGAGGGGTTGATACAAAAGGGTCAAGAACAAAAGGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACAAGCATCCAGATCCTGGAATATAAGGTTTGATAATGCGATCAAATCTTATGGTTTTAAACAAAATGTTGAAGAACCTTGTGTTTACAAAAGGATCACCAATTCTACTGTAGCATTCTTAGTTCTGTATGTAGATGAAATTCTACTCATTGGGAATGATGTAGATCGTCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTGGTATCCAAACAGTTCGAAACCGAAAAAACAAAACACTAACCATGTCTCAAACATCTTATATAGACATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGTTGTCGTACAGATATGAAATTCATTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTCTGTTGTCGTACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAAAAGTTGAGGATATAAGTAACATTCCCTATGCTTCTACTGTTAGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAATAGGGATAATTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGATCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGGTAGAAAGTCCACATCAGGATCAGTTTTCACTCTAAATGGAGGAGGAGTAGTGTGGAGAAGCATAAAACAATCCTGTATTGCCGAGTCCACTATGGAAGCTGAATATGTAGCTGCTTGTGAAGCAGCAAAGGAAGCAGTATGGCTTAAAAAGTTCTTAATAGATTTGGAAGTTGTTCCAAATATGCATTTGTCAATCACCTTATACTGTGACAACAGTGATGTAGTTACAAATTCACGAGAACCTTTAAGTCATAAACGAGGAAAACACATTGAACAAAAGTACCATATGATCAGGAAAATCGTACATCGAGGAGATGTTACTGTAACAAAAATCTCCTCTGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGCTATCTACATGGTTTAGGTCTGTTTGATTTGTAA

Protein sequence

MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKSYGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNAQYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKGLLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLNGGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNSDVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFESYLHGLGLFDL
Homology
[Close]
BLAST of Cmc07g0196221 vs. NCBI nr
Match: KAA0063026.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 859.8 bits (2220), Expect = 1.0e-245
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0 

Query: 1   MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
           MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS
Sbjct: 367 MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 426

Query: 61  YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
           YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA
Sbjct: 427 YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 486

Query: 121 QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
           QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG
Sbjct: 487 QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 546

Query: 181 LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
           LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS
Sbjct: 547 LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 606

Query: 241 NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
           NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN
Sbjct: 607 NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 666

Query: 301 GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
           GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS
Sbjct: 667 GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 726

Query: 361 DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
           DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES
Sbjct: 727 DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 786

Query: 421 YLHGLGLFDL 431
           YLHGLGLFDL
Sbjct: 787 YLHGLGLFDL 796

[Close]
BLAST of Cmc07g0196221 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 657.9 bits (1696), Expect = 6.0e-185
Identity = 328/430 (76.28%), Postives = 361/430 (83.95%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESI+M QPEG I +GQEQKVCKL +SIYGLKQASRSWNIRFD AIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF QNV+EPCVYK+I    VAFLVLYVD+ILLIGNDV  LTD+K WLA QFQMKDLG A
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 942

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QYVLGIQ +R+RKNKTL +SQ +YID L                    L RY MQNSKKG
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKL--------------------LVRYSMQNSKKG 1002

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
            LL +R+ +HLSKEQ PKTPQ+VED+  IPYAS V SLMYAMLCTRPDICY++GI+SRYQS
Sbjct: 1003 LLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQS 1062

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPG DHWT VK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD RKSTSGSVFTLN
Sbjct: 1063 NPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN 1122

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRSIKQ CIA+STMEAEYVAACEAAKEAVWL+KFL DLEVVPNM+L ITLYCDNS
Sbjct: 1123 GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNS 1182

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
              V NS+EP SHKRGKHIE+KYH+IR+IV RGDV VTKI+SE N+ADPFTK LTAKVFE 
Sbjct: 1183 GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 1232

Query: 421  YLHGLGLFDL 431
            +L  LGL D+
Sbjct: 1243 HLESLGLRDM 1232

[Close]
BLAST of Cmc07g0196221 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 657.9 bits (1696), Expect = 6.0e-185
Identity = 328/430 (76.28%), Postives = 361/430 (83.95%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESI+M QPEG I +GQEQKVCKL +SIYGLKQASRSWNIRFD AIKS
Sbjct: 697  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 756

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF QNV+EPCVYK+I    VAFLVLYVD+ILLIGNDV  LTD+K WLA QFQMKDLG A
Sbjct: 757  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 816

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QYVLGIQ +R+RKNKTL +SQ +YID L                    L RY MQNSKKG
Sbjct: 817  QYVLGIQIIRDRKNKTLALSQATYIDKL--------------------LVRYSMQNSKKG 876

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
            LL +R+ +HLSKEQ PKTPQ+VED+  IPYAS V SLMYAMLCTRPDICY++GI+SRYQS
Sbjct: 877  LLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQS 936

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPG DHWT VK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD RKSTSGSVFTLN
Sbjct: 937  NPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN 996

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRSIKQ CIA+STMEAEYVAACEAAKEAVWL+KFL DLEVVPNM+L ITLYCDNS
Sbjct: 997  GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNS 1056

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
              V NS+EP SHKRGKHIE+KYH+IR+IV RGDV VTKI+SE N+ADPFTK LTAKVFE 
Sbjct: 1057 GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 1106

Query: 421  YLHGLGLFDL 431
            +L  LGL D+
Sbjct: 1117 HLESLGLRDM 1106

[Close]
BLAST of Cmc07g0196221 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 652.9 bits (1683), Expect = 1.9e-183
Identity = 327/430 (76.05%), Postives = 359/430 (83.49%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESI+M QPEG I +GQEQKVCKL +SIYGLKQASRSWNIRFD AIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF QNV+EPCVYK+I    VAFLVLYVD+ILLIGNDV  LTD+K WLA QFQMKDLG  
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEG 942

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QYVLGIQ +R+RKNKTL +SQ +YID L                    L RY MQNSKKG
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKL--------------------LVRYSMQNSKKG 1002

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
            LL +R+ +HLSKEQ PKTPQ+VED+  IPYAS V SLMYAMLCTRPDICY++GI+SRYQS
Sbjct: 1003 LLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQS 1062

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPG DHWT VK ILKYLRRT+DYMLVYG+KDLILTGYT+SDFQTDKD RKSTS SVFTLN
Sbjct: 1063 NPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLN 1122

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRSIKQ CIA+STMEAEYVAACEAAKEAVWLKKFL DLEVVPNM+L ITLYCDNS
Sbjct: 1123 GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNS 1182

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
              V NS+EP SHKRGKHIE+KYH+IR+IV RGDV VTKI+SE N+ADPFTK LTAKVFE 
Sbjct: 1183 GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 1232

Query: 421  YLHGLGLFDL 431
            +L  LGL D+
Sbjct: 1243 HLESLGLRDM 1232

[Close]
BLAST of Cmc07g0196221 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 646.0 bits (1665), Expect = 2.3e-181
Identity = 318/398 (79.90%), Postives = 348/398 (87.44%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESIYMVQPEG I + QEQKVCKLQKSIYGLKQASRSWNIRFD AIKS
Sbjct: 915  MDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKS 974

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF+QNV+EPCVYK+I NS VAFL+LYVD+ILLIGNDV+ LTD+KKWL TQFQMKDLG A
Sbjct: 975  YGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEA 1034

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QY+LGIQ VRNRKNKTL MSQ SYID +                    LSRYKMQNSKKG
Sbjct: 1035 QYILGIQIVRNRKNKTLAMSQASYIDKV--------------------LSRYKMQNSKKG 1094

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
             L +R+ IHLSKEQCPKTPQ+VED+ NIPY+S V SLMYAMLCTRPDICYS+GI+SRYQS
Sbjct: 1095 QLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQS 1154

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPGRDHWT VKNILKYLRRT++YMLVYG+KDLILTGYTDSDFQ+DKD RKSTSGSVFTLN
Sbjct: 1155 NPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLN 1214

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRS+KQ+CIA+STMEAEYVAACEAAKEAVWL+KFL DLEVVPNMHL ITLYCDNS
Sbjct: 1215 GGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNS 1274

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTK 399
              V NS+EP SHKRGKHIE+KYH+IR+IVHRGDV VT+
Sbjct: 1275 GAVANSKEPRSHKRGKHIERKYHLIREIVHRGDVVVTQ 1292

[Close]
BLAST of Cmc07g0196221 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 7.8e-95
Identity = 180/420 (42.86%), Postives = 262/420 (62.38%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            +DVK AFL+G+LEE IYM QPEG    G++  VCKL KS+YGLKQA R W ++FD+ +KS
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   YGFKQNVEEPCVY-KRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGN 120
              + +   +PCVY KR + +    L+LYVD++L++G D   +  +K  L+  F MKDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  AQYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKK 180
            AQ +LG++ VR R ++ L +SQ  YI+ +                    L R+ M+N+K 
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERV--------------------LERFNMKNAKP 1100

Query: 181  GLLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQ 240
                    + LSK+ CP T ++  +++ +PY+S V SLMYAM+CTRPDI +++G++SR+ 
Sbjct: 1101 VSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFL 1160

Query: 241  SNPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTL 300
             NPG++HW  VK IL+YLR T    L +G  D IL GYTD+D   D D RKS++G +FT 
Sbjct: 1161 ENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTF 1220

Query: 301  NGGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDN 360
            +GG + W+S  Q C+A ST EAEY+AA E  KE +WLK+FL +L +    ++   +YCD+
Sbjct: 1221 SGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV---VYCDS 1280

Query: 361  SDVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFE 420
               +  S+  + H R KHI+ +YH IR++V    + V KIS+ +N AD  TK +    FE
Sbjct: 1281 QSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFE 1317

[Close]
BLAST of Cmc07g0196221 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 236.1 bits (601), Expect = 7.3e-61
Identity = 151/436 (34.63%), Postives = 238/436 (54.59%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNG L+E IYM  P+G+        VCKL K+IYGLKQA+R W   F+ A+K 
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   YGFKQNVEEPCVY---KRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDL 120
              F  +  + C+Y   K   N  + +++LYVD++++   D+ R+ + K++L  +F+M DL
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDL 1120

Query: 121  GNAQYVLGIQTVRNRKNKTLTMSQTSYI-DMLSRYKMQNSKKGLLSYRYEIHLSRYKMQN 180
               ++ +GI+ +  +++K + +SQ++Y+  +LS++ M+N          +I+        
Sbjct: 1121 NEIKHFIGIR-IEMQEDK-IYLSQSAYVKKILSKFNMENCNAVSTPLPSKIN-------- 1180

Query: 181  SKKGLLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIIS 240
                     YE+  S E C           N P  S +  LMY MLCTRPD+  ++ I+S
Sbjct: 1181 ---------YELLNSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1240

Query: 241  RYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDGRKST 300
            RY S    + W  +K +L+YL+ T D  L++  K+L     + GY DSD+   +  RKST
Sbjct: 1241 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKST 1300

Query: 301  SGSVFTLNGGGVV-WRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHL 360
            +G +F +    ++ W + +Q+ +A S+ EAEY+A  EA +EA+WLK  L  + +   +  
Sbjct: 1301 TGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLEN 1360

Query: 361  SITLYCDNSDVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTK 420
             I +Y DN   ++ +  P  HKR KHI+ KYH  R+ V    + +  I +E  +AD FTK
Sbjct: 1361 PIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTK 1400

Query: 421  ALTAKVFESYLHGLGL 428
             L A  F      LGL
Sbjct: 1421 PLPAARFVELRDKLGL 1400

[Close]
BLAST of Cmc07g0196221 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.3e-51
Identity = 132/429 (30.77%), Postives = 208/429 (48.48%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            +DV  AFL G L + +YM QP G + K +   VC+L+K+IYGLKQA R+W +     + +
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
             GF  ++ +  ++      ++ ++++YVD+IL+ GND   L      L+ +F +K+  + 
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSY-IDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKK 180
             Y LGI+    R  + L +SQ  Y +D+L+R  M  +K                M  S K
Sbjct: 1167 HYFLGIEA--KRVPQGLHLSQRRYTLDLLARTNMLTAKP-----------VATPMATSPK 1226

Query: 181  GLLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQ 240
                      L+     K P   E      Y   V SL Y +  TRPD+ Y++  +S+Y 
Sbjct: 1227 ----------LTLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYM 1286

Query: 241  SNPGRDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFT 300
              P  DHW  +K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  
Sbjct: 1287 HMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1346

Query: 301  LNGGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCD 360
            L    + W S KQ  +  S+ EAEY +    + E  W+   L +L +   +     +YCD
Sbjct: 1347 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCD 1406

Query: 361  NSDVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVF 420
            N         P+ H R KHI   YH IR  V  G + V  +S+   +AD  TK L+   F
Sbjct: 1407 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1443

Query: 421  ESYLHGLGL 428
            +++   +G+
Sbjct: 1467 QNFSRKIGV 1443

[Close]
BLAST of Cmc07g0196221 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-50
Identity = 134/429 (31.24%), Postives = 208/429 (48.48%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            +DV  AFL G L + +YM QP G I K +   VCKL+K++YGLKQA R+W +   N + +
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
             GF  +V +  ++      ++ ++++YVD+IL+ GND   L +    L+ +F +KD    
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYI-DMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKK 180
             Y LGI+    R    L +SQ  YI D+L+R  M  +K           LS Y       
Sbjct: 1184 HYFLGIEA--KRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLY------- 1243

Query: 181  GLLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQ 240
                              +  K+ D +   Y   V SL Y +  TRPDI Y++  +S++ 
Sbjct: 1244 ------------------SGTKLTDPTE--YRGIVGSLQY-LAFTRPDISYAVNRLSQFM 1303

Query: 241  SNPGRDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFT 300
              P  +H   +K IL+YL  T ++ + +     L L  Y+D+D+  DKD   ST+G +  
Sbjct: 1304 HMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVY 1363

Query: 301  LNGGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCD 360
            L    + W S KQ  +  S+ EAEY +    + E  W+   L +L +   +     +YCD
Sbjct: 1364 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCD 1423

Query: 361  NSDVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVF 420
            N         P+ H R KHI   YH IR  V  G + V  +S+   +AD  TK L+   F
Sbjct: 1424 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1460

Query: 421  ESYLHGLGL 428
            +++   +G+
Sbjct: 1484 QNFASKIGV 1460

[Close]
BLAST of Cmc07g0196221 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 2.7e-31
Identity = 101/334 (30.24%), Postives = 152/334 (45.51%), Query Frame = 0 

Query: 1   MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
           MDV  AFLN  ++E IY+ QP G + +     V +L   +YGLKQA   WN   +N +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            GF ++  E  +Y R T+    ++ +YVD++L+          +K+ L   + MKDLG  
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
              LG+  +    N  +T+S   YI   +                E  ++ +K+  +   
Sbjct: 121 DKFLGL-NIHQSSNGDITLSLQDYIAKAAS---------------ESEINTFKLTQT--- 180

Query: 181 LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
                  +  SK     T   ++DI+  PY S V  L++     RPDI Y + ++SR+  
Sbjct: 181 ------PLCNSKPLFETTSPHLKDIT--PYQSIVGQLLFCANTGRPDISYPVSLLSRFLR 240

Query: 241 NPGRDHWTTVKNILKYLRRTKDYMLVYGS-KDLILTGYTDSDFQTDKDGRKSTSGSVFTL 300
            P   H  + + +L+YL  T+   L Y S   L LT Y D+      D   ST G V  L
Sbjct: 241 EPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLL 300

Query: 301 NGGGVVWRSIK-QSCIAESTMEAEYVAACEAAKE 333
            G  V W S K +  I   + EAEY+ A E   E
Sbjct: 301 AGAPVTWSSKKLKGVIPVPSTEAEYITASETVME 307

[Close]
BLAST of Cmc07g0196221 vs. ExPASy TrEMBL
Match: A0A5A7V9B0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001330 PE=4 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 5.0e-246
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0 

Query: 1   MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
           MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS
Sbjct: 367 MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 426

Query: 61  YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
           YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA
Sbjct: 427 YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 486

Query: 121 QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
           QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG
Sbjct: 487 QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 546

Query: 181 LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
           LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS
Sbjct: 547 LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 606

Query: 241 NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
           NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN
Sbjct: 607 NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 666

Query: 301 GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
           GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS
Sbjct: 667 GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 726

Query: 361 DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
           DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES
Sbjct: 727 DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 786

Query: 421 YLHGLGLFDL 431
           YLHGLGLFDL
Sbjct: 787 YLHGLGLFDL 796

[Close]
BLAST of Cmc07g0196221 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.9e-185
Identity = 328/430 (76.28%), Postives = 361/430 (83.95%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESI+M QPEG I +GQEQKVCKL +SIYGLKQASRSWNIRFD AIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF QNV+EPCVYK+I    VAFLVLYVD+ILLIGNDV  LTD+K WLA QFQMKDLG A
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 942

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QYVLGIQ +R+RKNKTL +SQ +YID L                    L RY MQNSKKG
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKL--------------------LVRYSMQNSKKG 1002

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
            LL +R+ +HLSKEQ PKTPQ+VED+  IPYAS V SLMYAMLCTRPDICY++GI+SRYQS
Sbjct: 1003 LLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQS 1062

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPG DHWT VK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD RKSTSGSVFTLN
Sbjct: 1063 NPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN 1122

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRSIKQ CIA+STMEAEYVAACEAAKEAVWL+KFL DLEVVPNM+L ITLYCDNS
Sbjct: 1123 GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNS 1182

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
              V NS+EP SHKRGKHIE+KYH+IR+IV RGDV VTKI+SE N+ADPFTK LTAKVFE 
Sbjct: 1183 GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 1232

Query: 421  YLHGLGLFDL 431
            +L  LGL D+
Sbjct: 1243 HLESLGLRDM 1232

[Close]
BLAST of Cmc07g0196221 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.9e-185
Identity = 328/430 (76.28%), Postives = 361/430 (83.95%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESI+M QPEG I +GQEQKVCKL +SIYGLKQASRSWNIRFD AIKS
Sbjct: 697  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 756

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF QNV+EPCVYK+I    VAFLVLYVD+ILLIGNDV  LTD+K WLA QFQMKDLG A
Sbjct: 757  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 816

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QYVLGIQ +R+RKNKTL +SQ +YID L                    L RY MQNSKKG
Sbjct: 817  QYVLGIQIIRDRKNKTLALSQATYIDKL--------------------LVRYSMQNSKKG 876

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
            LL +R+ +HLSKEQ PKTPQ+VED+  IPYAS V SLMYAMLCTRPDICY++GI+SRYQS
Sbjct: 877  LLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQS 936

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPG DHWT VK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD RKSTSGSVFTLN
Sbjct: 937  NPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN 996

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRSIKQ CIA+STMEAEYVAACEAAKEAVWL+KFL DLEVVPNM+L ITLYCDNS
Sbjct: 997  GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNS 1056

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
              V NS+EP SHKRGKHIE+KYH+IR+IV RGDV VTKI+SE N+ADPFTK LTAKVFE 
Sbjct: 1057 GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 1106

Query: 421  YLHGLGLFDL 431
            +L  LGL D+
Sbjct: 1117 HLESLGLRDM 1106

[Close]
BLAST of Cmc07g0196221 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 9.3e-184
Identity = 327/430 (76.05%), Postives = 359/430 (83.49%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESI+M QPEG I +GQEQKVCKL +SIYGLKQASRSWNIRFD AIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF QNV+EPCVYK+I    VAFLVLYVD+ILLIGNDV  LTD+K WLA QFQMKDLG  
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEG 942

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QYVLGIQ +R+RKNKTL +SQ +YID L                    L RY MQNSKKG
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKL--------------------LVRYSMQNSKKG 1002

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
            LL +R+ +HLSKEQ PKTPQ+VED+  IPYAS V SLMYAMLCTRPDICY++GI+SRYQS
Sbjct: 1003 LLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQS 1062

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPG DHWT VK ILKYLRRT+DYMLVYG+KDLILTGYT+SDFQTDKD RKSTS SVFTLN
Sbjct: 1063 NPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLN 1122

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRSIKQ CIA+STMEAEYVAACEAAKEAVWLKKFL DLEVVPNM+L ITLYCDNS
Sbjct: 1123 GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNS 1182

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTKISSEQNMADPFTKALTAKVFES 420
              V NS+EP SHKRGKHIE+KYH+IR+IV RGDV VTKI+SE N+ADPFTK LTAKVFE 
Sbjct: 1183 GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 1232

Query: 421  YLHGLGLFDL 431
            +L  LGL D+
Sbjct: 1243 HLESLGLRDM 1232

[Close]
BLAST of Cmc07g0196221 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 1.1e-181
Identity = 318/398 (79.90%), Postives = 348/398 (87.44%), Query Frame = 0 

Query: 1    MDVKIAFLNGNLEESIYMVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKS 60
            MDVK AFLNGNLEESIYMVQPEG I + QEQKVCKLQKSIYGLKQASRSWNIRFD AIKS
Sbjct: 915  MDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKS 974

Query: 61   YGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNA 120
            YGF+QNV+EPCVYK+I NS VAFL+LYVD+ILLIGNDV+ LTD+KKWL TQFQMKDLG A
Sbjct: 975  YGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEA 1034

Query: 121  QYVLGIQTVRNRKNKTLTMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKG 180
            QY+LGIQ VRNRKNKTL MSQ SYID +                    LSRYKMQNSKKG
Sbjct: 1035 QYILGIQIVRNRKNKTLAMSQASYIDKV--------------------LSRYKMQNSKKG 1094

Query: 181  LLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQS 240
             L +R+ IHLSKEQCPKTPQ+VED+ NIPY+S V SLMYAMLCTRPDICYS+GI+SRYQS
Sbjct: 1095 QLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQS 1154

Query: 241  NPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLN 300
            NPGRDHWT VKNILKYLRRT++YMLVYG+KDLILTGYTDSDFQ+DKD RKSTSGSVFTLN
Sbjct: 1155 NPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLN 1214

Query: 301  GGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSITLYCDNS 360
            GG VVWRS+KQ+CIA+STMEAEYVAACEAAKEAVWL+KFL DLEVVPNMHL ITLYCDNS
Sbjct: 1215 GGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNS 1274

Query: 361  DVVTNSREPLSHKRGKHIEQKYHMIRKIVHRGDVTVTK 399
              V NS+EP SHKRGKHIE+KYH+IR+IVHRGDV VT+
Sbjct: 1275 GAVANSKEPRSHKRGKHIERKYHLIREIVHRGDVVVTQ 1292

[Close]
BLAST of Cmc07g0196221 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 169.1 bits (427), Expect = 7.8e-42
Identity = 120/437 (27.46%), Postives = 219/437 (50.11%), Query Frame = 0 

Query: 1   MDVKIAFLNGNLEESIYMVQPEGLIQKGQE----QKVCKLQKSIYGLKQASRSWNIRFDN 60
           +D+  AFLNG+L+E IYM  P G   +  +      VC L+KSIYGLKQASR W ++F  
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  AIKSYGFKQNVEEPCVYKRITNSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKD 120
            +  +GF Q+  +   + +IT +    +++YVD+I++  N+   + ++K  L + F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGNAQYVLGIQTVRNRKNKTLTMSQTSY-IDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQ 180
           LG  +Y LG++  R+     + + Q  Y +D+L    +   K   +     +  S +   
Sbjct: 313 LGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH--- 372

Query: 181 NSKKGLLSYRYEIHLSKEQCPKTPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGII 240
                                      + +    Y   +  LMY  + TR DI +++  +
Sbjct: 373 ------------------------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKL 432

Query: 241 SRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGSK-DLILTGYTDSDFQTDKDGRKSTSG 300
           S++   P   H   V  IL Y++ T    L Y S+ ++ L  ++D+ FQ+ KD R+ST+G
Sbjct: 433 SQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNG 492

Query: 301 SVFTLNGGGVVWRSIKQSCIAESTMEAEYVAACEAAKEAVWLKKFLIDLEVVPNMHLSIT 360
               L    + W+S KQ  +++S+ EAEY A   A  E +WL +F  +L++   +     
Sbjct: 493 YCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTL 552

Query: 361 LYCDNSDVVTNSREPLSHKRGKHIEQKYHMIR-KIVHRGDVTVTKISSEQNMADPFTKAL 420
           L+CDN+  +  +   + H+R KHIE   H +R + V++  ++ +  + ++   D FT+ L
Sbjct: 553 LFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYL 595

Query: 421 TAKVFESYLHGLGLFDL 431
           +  +  + ++ + +F L
Sbjct: 613 SPILRGTIMYIVSMFGL 595

[Close]
BLAST of Cmc07g0196221 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 8.2e-15
Identity = 70/254 (27.56%), Postives = 116/254 (45.67%), Query Frame = 0 

Query: 83  FLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNAQYVLGIQTVRNRKNKTLTMSQT 142
           +L+LYVD+ILL G+    L  +   L++ F MKDLG   Y LGIQ   +     L +SQT
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 143 SYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKGLLSYRYEIHLSKEQCPKTPQKV 202
            Y + +       +  G+L  +        K+ +S                    +  K 
Sbjct: 62  KYAEQIL------NNAGMLDCKPMSTPLPLKLNSS-------------------VSTAKY 121

Query: 203 EDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQSNPGRDHWTTVKNILKYLRRTKD 262
            D S+  + S V +L Y  L TRPDI Y++ I+ +    P    +  +K +L+Y++ T  
Sbjct: 122 PDPSD--FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIF 181

Query: 263 Y-MLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLNGGGVVWRSIKQSCIAESTMEA 322
           + + ++ +  L +  + DSD+      R+ST+G    L    + W + +Q  ++ S+ E 
Sbjct: 182 HGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTET 225

Query: 323 EYVAACEAAKEAVW 336
           EY A    A E  W
Sbjct: 242 EYRALALTAAELTW 225

The following BLAST results are available for this feature:
BLAST of Cmc07g0196221 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063026.11.0e-245100.00gag/pol protein [Cucumis melo var. makuwa][more]
KAA0025945.16.0e-18576.28gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... [more]
KAA0059226.16.0e-18576.28gag/pol protein [Cucumis melo var. makuwa][more]
KAA0035907.11.9e-18376.05gag/pol protein [Cucumis melo var. makuwa][more]
ADJ18449.12.3e-18179.90gag/pol protein, partial [Bryonia dioica][more]
BLAST of Cmc07g0196221 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109787.8e-9542.86Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041467.3e-6134.63Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT945.3e-5130.77Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.5e-5031.24Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256002.7e-3130.24Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
BLAST of Cmc07g0196221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V9B05.0e-246100.00Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0013... [more]
A0A5A7TZD02.9e-18576.28Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... [more]
A0A5A7UYE82.9e-18576.28Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... [more]
A0A5A7T2V99.3e-18476.05Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... [more]
E2GK511.1e-18179.90Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1[more]
BLAST of Cmc07g0196221 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.17.8e-4227.46cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.18.2e-1527.56DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..149
e-value: 4.6E-38
score: 131.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..266
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 275..416
e-value: 7.37155E-59
score: 187.29
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..383

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0196221.1Cmc07g0196221.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding