Cmc07g0195411 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0195411
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr07: 18714211 .. 18715416 (-)
RNA-Seq ExpressionCmc07g0195411
SyntenyCmc07g0195411
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTAAAAATGCATTCCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGTACTACTCCACCACCACAAAAAGTGTGTCTTCTTCGTCGTGCTCTCTACGGTCTTAAACAGGCTCCTCGAGCTTGGTTTGCCACGTTCAGTTCCACTATTACCCAACTTGGGTTCACCTCCAGCTTTCATGATTCTTCCTTATTTACTCGTCAGACATCTCGTAGTATTGTTCTCCTTCTTTTATATGTTGATGACATGATCATTACAGGTGACAACCCCCACGCCATATCTGATCTGCAATGTTACCTAGGTAAGCATTTTGAGATGAAAGACTTAGGAAATCTCAGCTATTTTCTTGGTCTTGAGATCTCATCCTCACCTAGTGGCTACTCCTTATCTCAAGCAAAATATGCTTCTGACCTCCTCAGTAGATCTGGTATTACTGACTCTGCCACATTCTCAACGCCTCTGGATCCAAATGTGCGACTCACCCCTTTTGATGGTGTCCCTCTTGATGATCCCACTTTGTATCGGCAACTTGTTGGTAGCCTAATTTACCTAACCGTGACTCGTCCAGATATTGCATACGCAGTTCACATTGTTAGTCAGTTCATGGCTGCTTCTCGTACAATTCACTTCACTGCTGTTCTGCGTATCCTTCGCTACATTAAAGGCACTTTGGGTCATGGTTTGTAGTTCTCCTCTCAATCGTCCCTGGTTCTCTCTGGATTCTCTGATGTTGATTGGACGAGTGATCCTACTGATAGACGATCTACCAATGGTTATTGTTTCTATCTGGGTGATGCTCTTATCTCCTGGCAAAGCAAGAAACAATCTGTTGTTTCCCGTTCCAACACAGAGTCTGAATATCGTGCTCTAGCTGATGCCACTTCAGAACTACTATGGCTTCGTTGGCTTCTAACTGATATAGGGCCCCCACGCTCAGCATCTACTGTTCTTCATTGTGATAACCGCAGTGCTATTCAGATTTCCCATAATGATGTATTCCATGAGCGAACAAAGCACATTGAGAATGATTGCCACTTTGTTCGCCATCATCTTCAGAACAACACTCTCCATCTCCAACCCATCTCCACCACTGATCAACCTGCGGACATCTTCACCAAAGCTCTCAATTCTCCTCGTTTCACAAAATTAACTCACAAACTCAAGGTGGTTTCCACTCTCCCATCTTGA

mRNA sequence

ATGGATGTTAAAAATGCATTCCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGTACTACTCCACCACCACAAAAAGTGTGTCTTCTTCGTCGTGCTCTCTACGGTCTTAAACAGGCTCCTCGAGCTTGGTTTGCCACGTTCAGTTCCACTATTACCCAACTTGGGTTCACCTCCAGCTTTCATGATTCTTCCTTATTTACTCGTCAGACATCTCGTAGTATTGTTCTCCTTCTTTTATATGTTGATGACATGATCATTACAGGTGACAACCCCCACGCCATATCTGATCTGCAATGTTACCTAGGTAAGCATTTTGAGATGAAAGACTTAGGAAATCTCAGCTATTTTCTTGGTCTTGAGATCTCATCCTCACCTAGTGGCTACTCCTTATCTCAAGCAAAATATGCTTCTGACCTCCTCAGTAGATCTGGTATTACTGACTCTGCCACATTCTCAACGCCTCTGGATCCAAATGTGCGACTCACCCCTTTTGATGGTGTCCCTCTTGATGATCCCACTTTGTATCGGCAACTTGTTGGTAGCCTAATTTACCTAACCGTGACTCGTCCAGATATTGCATACGCAGTTCACATTGTTAGTCAGTTCATGGCTGCTTCTCGTACAATTCACTTCACTGCTGTTCTGCGTATCCTTCGCTACATTAAAGGCACTTTGGGTCATGGTTTACGATCTACCAATGGTTATTGTTTCTATCTGGGTGATGCTCTTATCTCCTGGCAAAGCAAGAAACAATCTGTTGTTTCCCGTTCCAACACAGAGTCTGAATATCGTGCTCTAGCTGATGCCACTTCAGAACTACTATGGCTTCGTTGGCTTCTAACTGATATAGGGCCCCCACGCTCAGCATCTACTGTTCTTCATTGTGATAACCGCAGTGCTATTCAGATTTCCCATAATGATGTATTCCATGAGCGAACAAAGCACATTGAGAATGATTGCCACTTTGTTCGCCATCATCTTCAGAACAACACTCTCCATCTCCAACCCATCTCCACCACTGATCAACCTGCGGACATCTTCACCAAAGCTCTCAATTCTCCTCGTTTCACAAAATTAACTCACAAACTCAAGGTGGTTTCCACTCTCCCATCTTGA

Coding sequence (CDS)

ATGGATGTTAAAAATGCATTCCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGTACTACTCCACCACCACAAAAAGTGTGTCTTCTTCGTCGTGCTCTCTACGGTCTTAAACAGGCTCCTCGAGCTTGGTTTGCCACGTTCAGTTCCACTATTACCCAACTTGGGTTCACCTCCAGCTTTCATGATTCTTCCTTATTTACTCGTCAGACATCTCGTAGTATTGTTCTCCTTCTTTTATATGTTGATGACATGATCATTACAGGTGACAACCCCCACGCCATATCTGATCTGCAATGTTACCTAGGTAAGCATTTTGAGATGAAAGACTTAGGAAATCTCAGCTATTTTCTTGGTCTTGAGATCTCATCCTCACCTAGTGGCTACTCCTTATCTCAAGCAAAATATGCTTCTGACCTCCTCAGTAGATCTGGTATTACTGACTCTGCCACATTCTCAACGCCTCTGGATCCAAATGTGCGACTCACCCCTTTTGATGGTGTCCCTCTTGATGATCCCACTTTGTATCGGCAACTTGTTGGTAGCCTAATTTACCTAACCGTGACTCGTCCAGATATTGCATACGCAGTTCACATTGTTAGTCAGTTCATGGCTGCTTCTCGTACAATTCACTTCACTGCTGTTCTGCGTATCCTTCGCTACATTAAAGGCACTTTGGGTCATGGTTTACGATCTACCAATGGTTATTGTTTCTATCTGGGTGATGCTCTTATCTCCTGGCAAAGCAAGAAACAATCTGTTGTTTCCCGTTCCAACACAGAGTCTGAATATCGTGCTCTAGCTGATGCCACTTCAGAACTACTATGGCTTCGTTGGCTTCTAACTGATATAGGGCCCCCACGCTCAGCATCTACTGTTCTTCATTGTGATAACCGCAGTGCTATTCAGATTTCCCATAATGATGTATTCCATGAGCGAACAAAGCACATTGAGAATGATTGCCACTTTGTTCGCCATCATCTTCAGAACAACACTCTCCATCTCCAACCCATCTCCACCACTGATCAACCTGCGGACATCTTCACCAAAGCTCTCAATTCTCCTCGTTTCACAAAATTAACTCACAAACTCAAGGTGGTTTCCACTCTCCCATCTTGA

Protein sequence

MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGLRSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADATSELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNNTLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS
Homology
BLAST of Cmc07g0195411 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 684.9 bits (1766), Expect = 4.0e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 946  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 1005

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 1006 FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 1065

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 1066 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1125

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1126 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1185

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1186 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1245

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1246 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1305

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 1306 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

BLAST of Cmc07g0195411 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 684.9 bits (1766), Expect = 4.0e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 914  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 973

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 974  FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 1033

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 1034 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1093

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1094 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1153

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1154 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1213

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1214 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1273

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 1274 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1314

BLAST of Cmc07g0195411 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 684.9 bits (1766), Expect = 4.0e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 946  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 1005

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 1006 FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 1065

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 1066 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1125

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1126 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1185

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1186 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1245

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1246 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1305

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 1306 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

BLAST of Cmc07g0195411 vs. NCBI nr
Match: TYK12316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK28111.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 684.9 bits (1766), Expect = 4.0e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1   MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
           MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 362 MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 421

Query: 61  FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
           FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 422 FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 481

Query: 121 FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
           FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 482 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 541

Query: 181 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
           RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 542 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 601

Query: 241 -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                              RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 602 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 661

Query: 301 SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
           SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 662 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 721

Query: 361 TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
           TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 722 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 762

BLAST of Cmc07g0195411 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 676.8 bits (1745), Expect = 1.1e-190
Identity = 342/401 (85.29%), Postives = 360/401 (89.78%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 863  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 922

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 923  FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 982

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            F+GLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 983  FIGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1042

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1043 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1102

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1103 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1162

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+  P+++  +LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1163 SELIWLRWLLTDMRAPQTSPIILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1222

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKV STLPS
Sbjct: 1223 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVFSTLPS 1263

BLAST of Cmc07g0195411 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.7e-85
Identity = 176/403 (43.67%), Postives = 240/403 (59.55%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPG--TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQ 60
            +DV NAFL GTL+++VYM  PPG      P  VC LR+ALYGLKQAPRAW+    + +  
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   LGFTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNL 120
            +GF +S  D+SLF  Q  +SIV +L+YVDD++ITG++P  + +    L + F +KD   L
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  SYFLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPT 180
             YFLG+E    P+G  LSQ +Y  DLL+R+ +  +   +TP+ P+ +L+ + G  L DPT
Sbjct: 1184 HYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPT 1243

Query: 181  LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL---- 240
             YR +VGSL YL  TRPDI+YAV+ +SQFM      H  A+ RILRY+ GT  HG+    
Sbjct: 1244 EYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1303

Query: 241  ---------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALAD 300
                                  STNGY  YLG   ISW SKKQ  V RS+TE+EYR++A+
Sbjct: 1304 GNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1363

Query: 301  ATSELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQ 360
             +SE+ W+  LLT++G   +   V++CDN  A  +  N VFH R KHI  D HF+R+ +Q
Sbjct: 1364 TSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQ 1423

Query: 361  NNTLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            +  L +  +ST DQ AD  TK L+   F     K+ V    PS
Sbjct: 1424 SGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTRVPPS 1466

BLAST of Cmc07g0195411 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 9.2e-84
Identity = 173/403 (42.93%), Postives = 239/403 (59.31%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPP--PQKVCLLRRALYGLKQAPRAWFATFSSTITQ 60
            +DV NAFL GTL++EVYM  PPG      P  VC LR+A+YGLKQAPRAW+    + +  
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   LGFTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNL 120
            +GF +S  D+SLF  Q  RSI+ +L+YVDD++ITG++   +      L + F +K+  +L
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  SYFLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPT 180
             YFLG+E    P G  LSQ +Y  DLL+R+ +  +   +TP+  + +LT   G  L DPT
Sbjct: 1167 HYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPT 1226

Query: 181  LYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL---- 240
             YR +VGSL YL  TRPD++YAV+ +SQ+M      H+ A+ R+LRY+ GT  HG+    
Sbjct: 1227 EYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1286

Query: 241  ---------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALAD 300
                                  STNGY  YLG   ISW SKKQ  V RS+TE+EYR++A+
Sbjct: 1287 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1346

Query: 301  ATSELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQ 360
             +SEL W+  LLT++G   S   V++CDN  A  +  N VFH R KHI  D HF+R+ +Q
Sbjct: 1347 TSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQ 1406

Query: 361  NNTLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            +  L +  +ST DQ AD  TK L+   F   + K+ V+   PS
Sbjct: 1407 SGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1449

BLAST of Cmc07g0195411 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-59
Identity = 143/399 (35.84%), Postives = 216/399 (54.14%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVK AFLNGTL EE+YM+ P G +     VC L +A+YGLKQA R WF  F   + +  
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1060

Query: 61   FTSSFHDSSLF--TRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNL 120
            F +S  D  ++   +      + +LLYVDD++I   +   +++ + YL + F M DL  +
Sbjct: 1061 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1120

Query: 121  SYFLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPT 180
             +F+G+ I        LSQ+ Y   +LS+  + +    STPL   +     +    D  T
Sbjct: 1121 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS-DEDCNT 1180

Query: 181  LYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL--- 240
              R L+G L+Y+ + TRPD+  AV+I+S++ + + +  +  + R+LRY+KGT+   L   
Sbjct: 1181 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFK 1240

Query: 241  ------------------------RSTNGYCFYLGD-ALISWQSKKQSVVSRSNTESEYR 300
                                    +ST GY F + D  LI W +K+Q+ V+ S+TE+EY 
Sbjct: 1241 KNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYM 1300

Query: 301  ALADATSELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVR 360
            AL +A  E LWL++LLT I         ++ DN+  I I++N   H+R KHI+   HF R
Sbjct: 1301 ALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAR 1360

Query: 361  HHLQNNTLHLQPISTTDQPADIFTKALNSPRFTKLTHKL 369
              +QNN + L+ I T +Q ADIFTK L + RF +L  KL
Sbjct: 1361 EQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKL 1398

BLAST of Cmc07g0195411 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.6e-59
Identity = 147/397 (37.03%), Postives = 216/397 (54.41%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQK--VCLLRRALYGLKQAPRAWFATFSSTITQ 60
            +DVK AFL+G L EE+YM+ P G     +K  VC L ++LYGLKQAPR W+  F S +  
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   LGFTSSFHDSSL-FTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGN 120
              +  ++ D  + F R +  + ++LLLYVDDM+I G +   I+ L+  L K F+MKDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  LSYFLGLEISSSPSGYS--LSQAKYASDLLSRSGITDSATFSTPLDPNVRL------TPF 180
                LG++I    +     LSQ KY   +L R  + ++   STPL  +++L      T  
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  DGVPLDDPTLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKG 240
            +         Y   VGSL+Y  V TRPDIA+AV +VS+F+      H+ AV  ILRY++G
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  TLGHGL------------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNT 300
            T G  L                        +S+ GY F      ISWQSK Q  V+ S T
Sbjct: 1161 TTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTT 1220

Query: 301  ESEYRALADATSELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIEND 360
            E+EY A  +   E++WL+  L ++G       V++CD++SAI +S N ++H RTKHI+  
Sbjct: 1221 EAEYIAATETGKEMIWLKRFLQELG-LHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVR 1280

Query: 361  CHFVRHHLQNNTLHLQPISTTDQPADIFTKALNSPRF 362
             H++R  + + +L +  IST + PAD+ TK +   +F
Sbjct: 1281 YHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

BLAST of Cmc07g0195411 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.6e-41
Identity = 98/224 (43.75%), Postives = 132/224 (58.93%), Query Frame = 0

Query: 82  LLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYSLSQAKYA 141
           LLLYVDD+++TG +   ++ L   L   F MKDLG + YFLG++I + PSG  LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 142 SDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVTRPDIAYAV 201
             +L+ +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 202 HIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL-------------------------RS 261
           +IV Q M       F  + R+LRY+KGT+ HGL                         RS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 262 TNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADATSELLW 281
           T G+C +LG  +ISW +K+Q  VSRS+TE+EYRALA   +EL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc07g0195411 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.9e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 946  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 1005

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 1006 FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 1065

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 1066 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1125

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1126 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1185

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1186 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1245

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1246 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1305

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 1306 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

BLAST of Cmc07g0195411 vs. ExPASy TrEMBL
Match: A0A5D3DWU7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00160 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.9e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1   MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
           MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 362 MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 421

Query: 61  FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
           FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 422 FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 481

Query: 121 FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
           FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 482 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 541

Query: 181 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
           RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 542 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 601

Query: 241 -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                              RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 602 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 661

Query: 301 SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
           SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 662 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 721

Query: 361 TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
           TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 722 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 762

BLAST of Cmc07g0195411 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.9e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 946  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 1005

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 1006 FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 1065

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 1066 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1125

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1126 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1185

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1186 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1245

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1246 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1305

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 1306 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1346

BLAST of Cmc07g0195411 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.9e-193
Identity = 346/401 (86.28%), Postives = 363/401 (90.52%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 914  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 973

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 974  FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 1033

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            FLGLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 1034 FLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1093

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1094 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1153

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1154 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1213

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+G P+++ T+LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1214 SELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1273

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKVVSTLPS
Sbjct: 1274 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS 1314

BLAST of Cmc07g0195411 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 5.3e-191
Identity = 342/401 (85.29%), Postives = 360/401 (89.78%), Query Frame = 0

Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 863  MDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLG 922

Query: 61   FTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSY 120
            FTSS HDS+LFTRQT   IVLLLLYVDDMIITGD+P AISDLQCYLGKHFEMKDLGNL+Y
Sbjct: 923  FTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNY 982

Query: 121  FLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLY 180
            F+GLEISSS SGY LSQAKYASDLL+RSGITDSATFSTPLDPNVRLTPFDGVPL+DPTLY
Sbjct: 983  FIGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLY 1042

Query: 181  RQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL------ 240
            RQLVGSLIYLTVTRPDIAYAVHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGL      
Sbjct: 1043 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1102

Query: 241  -------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADAT 300
                               RST GYCFYLGDALISW+SKKQSVVSRS+TESEYRALADAT
Sbjct: 1103 SLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADAT 1162

Query: 301  SELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVRHHLQNN 360
            SEL+WLRWLLTD+  P+++  +LHCDN SAIQI+HNDVFHERTKHIENDCHFVRHHLQ+N
Sbjct: 1163 SELIWLRWLLTDMRAPQTSPIILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSN 1222

Query: 361  TLHLQPISTTDQPADIFTKALNSPRFTKLTHKLKVVSTLPS 377
            TLHLQPISTTDQPADIFTKAL+SPRFT+L HKLKV STLPS
Sbjct: 1223 TLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVFSTLPS 1263

BLAST of Cmc07g0195411 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 317.0 bits (811), Expect = 2.0e-86
Identity = 168/360 (46.67%), Postives = 226/360 (62.78%), Query Frame = 0

Query: 1   MDVKNAFLNGTLSEEVYMKPPP------GTTPPPQKVCLLRRALYGLKQAPRAWFATFSS 60
           +D+ NAFLNG L EE+YMK PP      G + PP  VC L++++YGLKQA R WF  FS 
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  TITQLGFTSSFHDSSLFTRQTSRSIVLLLLYVDDMIITGDNPHAISDLQCYLGKHFEMKD 120
           T+   GF  S  D + F + T+   + +L+YVDD+II  +N  A+ +L+  L   F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGNLSYFLGLEISSSPSGYSLSQAKYASDLLSRSGITDSATFSTPLDPNVRLTPFDGVPL 180
           LG L YFLGLEI+ S +G ++ Q KYA DLL  +G+      S P+DP+V  +   G   
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372

Query: 181 DDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL 240
            D   YR+L+G L+YL +TR DI++AV+ +SQF  A R  H  AV++IL YIKGT+G GL
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432

Query: 241 -------------------------RSTNGYCFYLGDALISWQSKKQSVVSRSNTESEYR 300
                                    RSTNGYC +LG +LISW+SKKQ VVS+S+ E+EYR
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492

Query: 301 ALADATSELLWLRWLLTDIGPPRSASTVLHCDNRSAIQISHNDVFHERTKHIENDCHFVR 330
           AL+ AT E++WL     ++  P S  T+L CDN +AI I+ N VFHERTKHIE+DCH VR
Sbjct: 493 ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552

BLAST of Cmc07g0195411 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 4.0e-42
Identity = 98/224 (43.75%), Postives = 132/224 (58.93%), Query Frame = 0

Query: 82  LLLYVDDMIITGDNPHAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYSLSQAKYA 141
           LLLYVDD+++TG +   ++ L   L   F MKDLG + YFLG++I + PSG  LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 142 SDLLSRSGITDSATFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVTRPDIAYAV 201
             +L+ +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 202 HIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL-------------------------RS 261
           +IV Q M       F  + R+LRY+KGT+ HGL                         RS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 262 TNGYCFYLGDALISWQSKKQSVVSRSNTESEYRALADATSELLW 281
           T G+C +LG  +ISW +K+Q  VSRS+TE+EYRALA   +EL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc07g0195411 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-08
Identity = 26/47 (55.32%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 188 IYLTVTRPDIAYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGL 235
           +YLT+TRPD+ +AV+ +SQF +ASRT    AV ++L Y+KGT+G GL
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGL 47

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0043149.14.0e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0065380.14.0e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0036574.14.0e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK12316.14.0e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0058316.11.1e-19085.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
Match NameE-valueIdentityDescription
Q94HW23.7e-8543.67Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT949.2e-8442.93Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041461.2e-5935.84Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109784.6e-5937.03Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P925195.6e-4143.75Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5D3DG181.9e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3DWU71.9e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SZ661.9e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7VDW01.9e-19386.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UVX45.3e-19185.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.0e-8646.67cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.0e-4243.75DNA/RNA polymerases superfamily protein [more]
ATMG00240.11.3e-0855.32Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..160
e-value: 1.5E-43
score: 149.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..264
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 235..359
e-value: 3.67032E-68
score: 209.247
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..327

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0195411.1Cmc07g0195411.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding