Cmc07g0194981 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0194981
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr07: 17978792 .. 17979715 (-)
RNA-Seq Expression	Cmc07g0194981
Synteny	Cmc07g0194981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGAGTCATGATACATGCTAAAAATCTACCCCTGCATTTTTGGGCAGAAGCTATTAACACAGCTTGCCACATTCACAATAGAATCACTACTCGATCTGAAACTAATGTAACTCTATATGAGTTGTGGAAAGGCAGAAAGCCTAATGTTAAATATTTTCATATTTTCGGAAGCACGTGTTATATTCTTGTTGATAAAGAATATCATCGAAAATGGGATGCTAAATCAAAACAAGGCCTATTCCTCGGATACTCACAAAACAGCAGAACCTACAGAGTTTTCAATAACATAACTGAAACAGTCATGGAAACAATTAATGTTCTGATCAAAGATTCAGAATACGCTATGAAGAATATTGATGATGAAGAAGGCGAAACACCTATGGTGACTCTAGCTCCAACTTCTACACCTGCTGATTCTGAGACAACAGATTCTGACTTATGCTCTAAACCTACACCTAAGGAAGCAGGAGTTAAAGGAACTATGTCAATCCCTTCATCACATGTTCGAAAAAATCATCTGTCAAGCTCAATTATTGGTGATCCGTCTGCTGGAATAACGACTAGGAAGAAGGATAAAGTAGATTACTCGAAAGTGATTGCTGATTTATGTTATACTTCAGCAATTGAACCCACTTCTGTTAAGGCTGTACTTAAAGATGAATTTTGGATAAACGCCATGCAAGAAGAGTTACTTCAATTTAAGCGTAAGAATGTATGGGCCTTGGTTCCTAAACCTGACGAGGCAAATATTATAAGAACCAAGTGGATTTTTAAAAATAAGGCTGATGAATCAGGCTGTGTAACAAGGAACAAATCTCGTTTCATGGCTCAAGGTTATGCCCAGATAGAAGGAATTGATTTTGATGAAACTTTTGCACCTGTTGCCAGACTTGTATCTAAGCTGTTTGTAGATGAGTAA

mRNA sequence

ATGGCTAGAGTCATGATACATGCTAAAAATCTACCCCTGCATTTTTGGGCAGAAGCTATTAACACAGCTTGCCACATTCACAATAGAATCACTACTCGATCTGAAACTAATGTAACTCTATATGAGTTGTGGAAAGGCAGAAAGCCTAATGTTAAATATTTTCATATTTTCGGAAGCACGTGTTATATTCTTGTTGATAAAGAATATCATCGAAAATGGGATGCTAAATCAAAACAAGGCCTATTCCTCGGATACTCACAAAACAGCAGAACCTACAGAGTTTTCAATAACATAACTGAAACAGTCATGGAAACAATTAATGTTCTGATCAAAGATTCAGAATACGCTATGAAGAATATTGATGATGAAGAAGGCGAAACACCTATGGTGACTCTAGCTCCAACTTCTACACCTGCTGATTCTGAGACAACAGATTCTGACTTATGCTCTAAACCTACACCTAAGGAAGCAGGAGTTAAAGGAACTATGTCAATCCCTTCATCACATGTTCGAAAAAATCATCTGTCAAGCTCAATTATTGGTGATCCGTCTGCTGGAATAACGACTAGGAAGAAGGATAAAGTAGATTACTCGAAAGTGATTGCTGATTTATGTTATACTTCAGCAATTGAACCCACTTCTGTTAAGGCTGTACTTAAAGATGAATTTTGGATAAACGCCATGCAAGAAGAGTTACTTCAATTTAAGCGTAAGAATGTATGGGCCTTGGTTCCTAAACCTGACGAGGCAAATATTATAAGAACCAAGTGGATTTTTAAAAATAAGGCTGATGAATCAGGCTGTGTAACAAGGAACAAATCTCGTTTCATGGCTCAAGGTTATGCCCAGATAGAAGGAATTGATTTTGATGAAACTTTTGCACCTGTTGCCAGACTTGTATCTAAGCTGTTTGTAGATGAGTAA

Coding sequence (CDS)

ATGGCTAGAGTCATGATACATGCTAAAAATCTACCCCTGCATTTTTGGGCAGAAGCTATTAACACAGCTTGCCACATTCACAATAGAATCACTACTCGATCTGAAACTAATGTAACTCTATATGAGTTGTGGAAAGGCAGAAAGCCTAATGTTAAATATTTTCATATTTTCGGAAGCACGTGTTATATTCTTGTTGATAAAGAATATCATCGAAAATGGGATGCTAAATCAAAACAAGGCCTATTCCTCGGATACTCACAAAACAGCAGAACCTACAGAGTTTTCAATAACATAACTGAAACAGTCATGGAAACAATTAATGTTCTGATCAAAGATTCAGAATACGCTATGAAGAATATTGATGATGAAGAAGGCGAAACACCTATGGTGACTCTAGCTCCAACTTCTACACCTGCTGATTCTGAGACAACAGATTCTGACTTATGCTCTAAACCTACACCTAAGGAAGCAGGAGTTAAAGGAACTATGTCAATCCCTTCATCACATGTTCGAAAAAATCATCTGTCAAGCTCAATTATTGGTGATCCGTCTGCTGGAATAACGACTAGGAAGAAGGATAAAGTAGATTACTCGAAAGTGATTGCTGATTTATGTTATACTTCAGCAATTGAACCCACTTCTGTTAAGGCTGTACTTAAAGATGAATTTTGGATAAACGCCATGCAAGAAGAGTTACTTCAATTTAAGCGTAAGAATGTATGGGCCTTGGTTCCTAAACCTGACGAGGCAAATATTATAAGAACCAAGTGGATTTTTAAAAATAAGGCTGATGAATCAGGCTGTGTAACAAGGAACAAATCTCGTTTCATGGCTCAAGGTTATGCCCAGATAGAAGGAATTGATTTTGATGAAACTTTTGCACCTGTTGCCAGACTTGTATCTAAGCTGTTTGTAGATGAGTAA

Protein sequence

MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGSTCYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNIDDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSIIGDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLVSKLFVDE

Homology

[Close]

BLAST of Cmc07g0194981 vs. NCBI nr
Match: KAA0026048.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 622.1 bits (1603), Expect = 2.6e-174
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST
Sbjct: 13  MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 72

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI
Sbjct: 73  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 132

Query: 121 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 180
           DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII
Sbjct: 133 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 192

Query: 181 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 240
           GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV
Sbjct: 193 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 252

Query: 241 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 300
           WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV
Sbjct: 253 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 312

Query: 301 SKLFVDE 308
           SKLFVDE
Sbjct: 313 SKLFVDE 319

[Close]

BLAST of Cmc07g0194981 vs. NCBI nr
Match: TYK22846.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 621.7 bits (1602), Expect = 3.4e-174
Identity = 306/307 (99.67%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST
Sbjct: 13  MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 72

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVL+KDSEYAMKNI
Sbjct: 73  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLVKDSEYAMKNI 132

Query: 121 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 180
           DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII
Sbjct: 133 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 192

Query: 181 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 240
           GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV
Sbjct: 193 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 252

Query: 241 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 300
           WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV
Sbjct: 253 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 312

Query: 301 SKLFVDE 308
           SKLFVDE
Sbjct: 313 SKLFVDE 319

[Close]

BLAST of Cmc07g0194981 vs. NCBI nr
Match: KAA0035996.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 489.2 bits (1258), Expect = 2.6e-134
Identity = 240/304 (78.95%), Postives = 264/304 (86.84%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MAR++IHAK+LPLHFWAEAIN ACHIH RITTRS +NVTLYELWKGRKPNVKYFHIF  T
Sbjct: 118 MARIIIHAKSLPLHFWAEAINIACHIHIRITTRSGSNVTLYELWKGRKPNVKYFHIFERT 177

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYIL D+EYHRKWDAKS+QGLFLG SQNSR Y+VFNN TETVMETIN+++ DSEY  K I
Sbjct: 178 CYILADREYHRKWDAKSEQGLFLGSSQNSRAYKVFNNRTETVMETINIVVNDSEYTNKKI 237

Query: 121 DDEEGETPMVTLAPTSTP-----ADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHL 180
           DDEE ETP VTLAPTSTP     AD ETT+S+LCSK T KEA V+GT+ IPSSHV KNH 
Sbjct: 238 DDEEDETPKVTLAPTSTPADVSKADIETTNSNLCSKYTSKEAVVEGTLPIPSSHVWKNHP 297

Query: 181 SSSIIGDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQF 240
           SSSIIGDPSAGITTRKKDK+DYSK+I DLCYTSAIEPTSV+A LKDE+WINAMQEEL+QF
Sbjct: 298 SSSIIGDPSAGITTRKKDKIDYSKMIIDLCYTSAIEPTSVEAALKDEYWINAMQEELVQF 357

Query: 241 KRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAP 300
           KR NVW LVPKP+  NII TKW+FKNK DESGCVTRNK+  +AQGYAQIEG+DFDE F P
Sbjct: 358 KRNNVWTLVPKPNGVNIIGTKWVFKNKTDESGCVTRNKACLVAQGYAQIEGVDFDEIFVP 417

[Close]

BLAST of Cmc07g0194981 vs. NCBI nr
Match: TYK30409.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-111
Identity = 212/304 (69.74%), Postives = 235/304 (77.30%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MAR++IHAK+LPLHFWAEAIN ACHIH RITTRS +NVTLYELWKGRKPNVKYFHIF  T
Sbjct: 118 MARIIIHAKSLPLHFWAEAINIACHIHIRITTRSGSNVTLYELWKGRKPNVKYFHIFERT 177

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYIL D+EYHRKWDAKS+QGLFLG SQNSR Y+VFNN TETVMETIN+++ DSEY  K I
Sbjct: 178 CYILADREYHRKWDAKSEQGLFLGSSQNSRAYKVFNNRTETVMETINIVVNDSEYTNKKI 237

Query: 121 DDEEGETPMVTLAPTSTP-----ADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHL 180
           DDEE ETP VTLAPTSTP     AD ETT+S+LCSK T KEA V+GT+ IPSSHV KNH 
Sbjct: 238 DDEEDETPKVTLAPTSTPADVSKADIETTNSNLCSKYTSKEAVVEGTLPIPSSHVWKNHP 297

Query: 181 SSSIIGDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQF 240
           SSSIIGDPSAGITTRKKDK+DYSK+I DLCYTSAIEPTSV+A LKDE+WINAMQEEL+QF
Sbjct: 298 SSSIIGDPSAGITTRKKDKIDYSKMIIDLCYTSAIEPTSVEAALKDEYWINAMQEELVQF 357

Query: 241 KRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAP 300
           KR NVW LVPKP+                                   ++G+DFDE F P
Sbjct: 358 KRNNVWTLVPKPN---------------------------------GVMQGVDFDEIFVP 388

[Close]

BLAST of Cmc07g0194981 vs. NCBI nr
Match: TYK21443.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 393.3 bits (1009), Expect = 2.0e-105
Identity = 208/328 (63.41%), Postives = 237/328 (72.26%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MARVMIHAKNLPL+FWAEA+NTACHIHNR+TTRS   VTLYEL KGRKPNVKYFHIFGST
Sbjct: 593 MARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSGMTVTLYELCKGRKPNVKYFHIFGST 652

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYIL D+EYHRKWDAKS QG+FLGYSQNSR YRVFN  + TVMETINV++ D E  +   
Sbjct: 653 CYILADREYHRKWDAKSGQGIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNVNQF 712

Query: 121 DDEEGETPMVTLAPTSTPAD----------SETTDSDLCSKPTPKEAGVKGTMSIPSSHV 180
           + E+ ET  VT   TSTP D          S  TDS +  +    E     TM +PS+HV
Sbjct: 713 NIEDDET-HVTPEVTSTPLDEMPKGESQLHSAKTDSSITDEVINNE-----TMLVPSAHV 772

Query: 181 RKNHLSSSIIGDPSAGITTRKKDKVDYSKVIA-------------------DLCYTSAIE 240
           +KNH SSSII DPSAGITTR+K+ ++ +  I+                   DLCY SAIE
Sbjct: 773 KKNHPSSSIISDPSAGITTRRKEMLNIAGPISLPFQGKRKFWIKEEVQNYKDLCYVSAIE 832

Query: 241 PTSVKAVLKDEFWINAMQEELLQFKRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTR 300
           PTSV+  LKDE+WI  MQEE LQFKR NVW LVPKPD ANII TKWIFKNK DESG + R
Sbjct: 833 PTSVENSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDGANIIGTKWIFKNKTDESGSIIR 892

[Close]

BLAST of Cmc07g0194981 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-22
Identity = 81/313 (25.88%), Postives = 143/313 (45.69%), Query Frame = 0


Query: 3   RVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGSTCY 62
           R M+    LP  FW EA+ TAC++ NR  +          +W  ++ +  +  +FG   +
Sbjct: 597 RSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAF 656

Query: 63  ILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEY---AMKN 122
             V KE   K D KS   +F+GY      YR+++ + + V+ + +V+ ++SE    A  +
Sbjct: 657 AHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMS 716

Query: 123 IDDEEGETP-MVTLAPTS-TPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSS 182
              + G  P  VT+  TS  P  +E+T  ++  +       ++    +        H + 
Sbjct: 717 EKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQ 776

Query: 183 S------IIGDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVL---KDEFWINAM 242
                  +       + +R+    +Y  +  D       EP S+K VL   +    + AM
Sbjct: 777 GEEQHQPLRRSERPRVESRRYPSTEYVLISDDR------EPESLKEVLSHPEKNQLMKAM 836

Query: 243 QEELLQFKRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGID 302
           QEE+   ++   + LV  P     ++ KW+FK K D    + R K+R + +G+ Q +GID
Sbjct: 837 QEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGID 896

[Close]

BLAST of Cmc07g0194981 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 99.8 bits (247), Expect = 5.9e-20
Identity = 98/395 (24.81%), Postives = 166/395 (42.03%), Query Frame = 0


Query: 2   ARVMIHAKNLPLHFWAEAINTACHIHNRITTRS--ETNVTLYELWKGRKPNVKYFHIFGS 61
           AR M+    L   FW EA+ TA ++ NRI +R+  +++ T YE+W  +KP +K+  +FG+
Sbjct: 596 ARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGA 655

Query: 62  TCYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITE-------TVMETIN----- 121
           T Y+ + K    K+D KS + +F+GY  N   +++++ + E        V++  N     
Sbjct: 656 TVYVHI-KNKQGKFDDKSFKSIFVGYEPNG--FKLWDAVNEKFIVARDVVVDETNMVNSR 715

Query: 122 ------VLIKDS-EYAMKNI--------------------------DDEEGETPMV---- 181
                 V +KDS E   KN                           D +E E        
Sbjct: 716 AVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDS 775

Query: 182 -TLAPTSTPADSETTDSDLCSKPTPK-------------------EAGVKGTMSIPSSHV 241
             +  T  P +S+  D+    K + +                   E+   G  +      
Sbjct: 776 RKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESE 835

Query: 242 RKNHLSSSIIGDPSAG----ITTRKKDKV-------------DYSKVIADLCYTSAIEPT 301
              HL    I +P+      I  R+ +++               +KV+ +        P 
Sbjct: 836 TAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPN 895

Query: 302 SVKAV-LKDE--FWINAMQEELLQFKRKNVWALVPKPDEANIIRTKWIFKNKADESGCVT 306
           S   +  +D+   W  A+  EL   K  N W +  +P+  NI+ ++W+F  K +E G   
Sbjct: 896 SFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPI 955

[Close]

BLAST of Cmc07g0194981 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 189 TRKKDKVDYSKVIADLCYTSAI--EPTSVKAVLKDEFWINAMQEELLQFKRKNVWALVPK 248
           TR K  ++       L  T+ I  EP SV   LKD  W  AMQEEL    R   W LVP 
Sbjct: 3   TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPP 62

Query: 249 PDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVAR 299
           P   NI+  KW+FK K    G + R K+R +A+G+ Q EGI F ET++PV R
Sbjct: 63  PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 114

[Close]

BLAST of Cmc07g0194981 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-12
Identity = 93/409 (22.74%), Postives = 151/409 (36.92%), Query Frame = 0


Query: 4    VMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGSTCYI 63
            ++ HA ++P  +W  A   A ++ NR+ T      + ++   G  PN     +FG  CY 
Sbjct: 639  LLSHA-SIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYP 698

Query: 64   LVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKN---- 123
             +      K D KS+Q +FLGYS     Y   +  T  +  + +V   ++ +   N    
Sbjct: 699  WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLAT 758

Query: 124  ---IDDEEGETPMV----TLAPTSTPA------------------------DSETTDSDL 183
               + ++  E+  V    T  PT TP                         +S+ + S+L
Sbjct: 759  LSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNL 818

Query: 184  CS----------KPT-PKEAG----VKGTMSIPSSHVRKN-------------------- 243
             S          +PT P++ G     + T +   +H  +N                    
Sbjct: 819  DSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLST 878

Query: 244  -HLSSSIIGDPSAGITTRKKDKVDYSKVI------------------------------- 302
               SSS    P+   ++        S +I                               
Sbjct: 879  PAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGI 938

[Close]

BLAST of Cmc07g0194981 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-12
Identity = 86/418 (20.57%), Postives = 149/418 (35.65%), Query Frame = 0


Query: 1    MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
            M   ++   ++P  +W  A + A ++ NR+ T      + ++   G+ PN +   +FG  
Sbjct: 614  MGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCA 673

Query: 61   CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKD-------S 120
            CY  +      K + KSKQ  F+GYS     Y   +  T  +  + +V   +       +
Sbjct: 674  CYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTT 733

Query: 121  EYAMKNIDDEEGE-------------TPMVTLAP-------------------------- 180
             + +    ++  +             TP+V  AP                          
Sbjct: 734  NFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVS 793

Query: 181  --------TSTPADSETT---------------------DSDLCSKPTPKEAGVKG---T 240
                     S+P+ SE T                     +S + + P P           
Sbjct: 794  SSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQN 853

Query: 241  MSIPSSHVRKNHL--SSSIIGDPSA--------------------------------GIT 300
              +P S +   H+   S+ I +P++                                 + 
Sbjct: 854  SPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMA 913

Query: 301  TRKKDKVDYSKVIADLCYTSAI----EPTSVKAVLKDEFWINAMQEELLQFKRKNVWALV 302
            TR KD +   K      Y +++    EP +    +KD+ W  AM  E+      + W LV
Sbjct: 914  TRAKDGI--RKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLV 973

[Close]

BLAST of Cmc07g0194981 vs. ExPASy TrEMBL
Match: A0A5A7SIP3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00350 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST
Sbjct: 13  MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 72

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI
Sbjct: 73  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 132

Query: 121 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 180
           DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII
Sbjct: 133 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 192

Query: 181 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 240
           GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV
Sbjct: 193 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 252

Query: 241 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 300
           WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV
Sbjct: 253 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 312

Query: 301 SKLFVDE 308
           SKLFVDE
Sbjct: 313 SKLFVDE 319

[Close]

BLAST of Cmc07g0194981 vs. ExPASy TrEMBL
Match: A0A5D3DGW5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00300 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 1.6e-174
Identity = 306/307 (99.67%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST
Sbjct: 13  MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 72

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVL+KDSEYAMKNI
Sbjct: 73  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLVKDSEYAMKNI 132

Query: 121 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 180
           DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII
Sbjct: 133 DDEEGETPMVTLAPTSTPADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHLSSSII 192

Query: 181 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 240
           GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV
Sbjct: 193 GDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNV 252

Query: 241 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 300
           WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV
Sbjct: 253 WALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLV 312

Query: 301 SKLFVDE 308
           SKLFVDE
Sbjct: 313 SKLFVDE 319

[Close]

BLAST of Cmc07g0194981 vs. ExPASy TrEMBL
Match: A0A5A7T197 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G002100 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.3e-134
Identity = 240/304 (78.95%), Postives = 264/304 (86.84%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MAR++IHAK+LPLHFWAEAIN ACHIH RITTRS +NVTLYELWKGRKPNVKYFHIF  T
Sbjct: 118 MARIIIHAKSLPLHFWAEAINIACHIHIRITTRSGSNVTLYELWKGRKPNVKYFHIFERT 177

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYIL D+EYHRKWDAKS+QGLFLG SQNSR Y+VFNN TETVMETIN+++ DSEY  K I
Sbjct: 178 CYILADREYHRKWDAKSEQGLFLGSSQNSRAYKVFNNRTETVMETINIVVNDSEYTNKKI 237

Query: 121 DDEEGETPMVTLAPTSTP-----ADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHL 180
           DDEE ETP VTLAPTSTP     AD ETT+S+LCSK T KEA V+GT+ IPSSHV KNH 
Sbjct: 238 DDEEDETPKVTLAPTSTPADVSKADIETTNSNLCSKYTSKEAVVEGTLPIPSSHVWKNHP 297

Query: 181 SSSIIGDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQF 240
           SSSIIGDPSAGITTRKKDK+DYSK+I DLCYTSAIEPTSV+A LKDE+WINAMQEEL+QF
Sbjct: 298 SSSIIGDPSAGITTRKKDKIDYSKMIIDLCYTSAIEPTSVEAALKDEYWINAMQEELVQF 357

Query: 241 KRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAP 300
           KR NVW LVPKP+  NII TKW+FKNK DESGCVTRNK+  +AQGYAQIEG+DFDE F P
Sbjct: 358 KRNNVWTLVPKPNGVNIIGTKWVFKNKTDESGCVTRNKACLVAQGYAQIEGVDFDEIFVP 417

[Close]

BLAST of Cmc07g0194981 vs. ExPASy TrEMBL
Match: A0A5D3E3N7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00110 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 5.2e-112
Identity = 212/304 (69.74%), Postives = 235/304 (77.30%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MAR++IHAK+LPLHFWAEAIN ACHIH RITTRS +NVTLYELWKGRKPNVKYFHIF  T
Sbjct: 118 MARIIIHAKSLPLHFWAEAINIACHIHIRITTRSGSNVTLYELWKGRKPNVKYFHIFERT 177

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYIL D+EYHRKWDAKS+QGLFLG SQNSR Y+VFNN TETVMETIN+++ DSEY  K I
Sbjct: 178 CYILADREYHRKWDAKSEQGLFLGSSQNSRAYKVFNNRTETVMETINIVVNDSEYTNKKI 237

Query: 121 DDEEGETPMVTLAPTSTP-----ADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRKNHL 180
           DDEE ETP VTLAPTSTP     AD ETT+S+LCSK T KEA V+GT+ IPSSHV KNH 
Sbjct: 238 DDEEDETPKVTLAPTSTPADVSKADIETTNSNLCSKYTSKEAVVEGTLPIPSSHVWKNHP 297

Query: 181 SSSIIGDPSAGITTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQF 240
           SSSIIGDPSAGITTRKKDK+DYSK+I DLCYTSAIEPTSV+A LKDE+WINAMQEEL+QF
Sbjct: 298 SSSIIGDPSAGITTRKKDKIDYSKMIIDLCYTSAIEPTSVEAALKDEYWINAMQEELVQF 357

Query: 241 KRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAP 300
           KR NVW LVPKP+                                   ++G+DFDE F P
Sbjct: 358 KRNNVWTLVPKPN---------------------------------GVMQGVDFDEIFVP 388

[Close]

BLAST of Cmc07g0194981 vs. ExPASy TrEMBL
Match: A0A5D3DCZ8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G001130 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 9.5e-106
Identity = 208/328 (63.41%), Postives = 237/328 (72.26%), Query Frame = 0


Query: 1   MARVMIHAKNLPLHFWAEAINTACHIHNRITTRSETNVTLYELWKGRKPNVKYFHIFGST 60
           MARVMIHAKNLPL+FWAEA+NTACHIHNR+TTRS   VTLYEL KGRKPNVKYFHIFGST
Sbjct: 593 MARVMIHAKNLPLNFWAEAVNTACHIHNRVTTRSGMTVTLYELCKGRKPNVKYFHIFGST 652

Query: 61  CYILVDKEYHRKWDAKSKQGLFLGYSQNSRTYRVFNNITETVMETINVLIKDSEYAMKNI 120
           CYIL D+EYHRKWDAKS QG+FLGYSQNSR YRVFN  + TVMETINV++ D E  +   
Sbjct: 653 CYILADREYHRKWDAKSGQGIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNVNQF 712

Query: 121 DDEEGETPMVTLAPTSTPAD----------SETTDSDLCSKPTPKEAGVKGTMSIPSSHV 180
           + E+ ET  VT   TSTP D          S  TDS +  +    E     TM +PS+HV
Sbjct: 713 NIEDDET-HVTPEVTSTPLDEMPKGESQLHSAKTDSSITDEVINNE-----TMLVPSAHV 772

Query: 181 RKNHLSSSIIGDPSAGITTRKKDKVDYSKVIA-------------------DLCYTSAIE 240
           +KNH SSSII DPSAGITTR+K+ ++ +  I+                   DLCY SAIE
Sbjct: 773 KKNHPSSSIISDPSAGITTRRKEMLNIAGPISLPFQGKRKFWIKEEVQNYKDLCYVSAIE 832

Query: 241 PTSVKAVLKDEFWINAMQEELLQFKRKNVWALVPKPDEANIIRTKWIFKNKADESGCVTR 300
           PTSV+  LKDE+WI  MQEE LQFKR NVW LVPKPD ANII TKWIFKNK DESG + R
Sbjct: 833 PTSVENSLKDEYWIKVMQEEFLQFKRNNVWTLVPKPDGANIIGTKWIFKNKTDESGSIIR 892

[Close]

BLAST of Cmc07g0194981 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-17
Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 189 TRKKDKVDYSKVIADLCYTSAI--EPTSVKAVLKDEFWINAMQEELLQFKRKNVWALVPK 248
           TR K  ++       L  T+ I  EP SV   LKD  W  AMQEEL    R   W LVP 
Sbjct: 3   TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPP 62

Query: 249 PDEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVAR 299
           P   NI+  KW+FK K    G + R K+R +A+G+ Q EGI F ET++PV R
Sbjct: 63  PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 114

[Close]

BLAST of Cmc07g0194981 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-13
Identity = 50/174 (28.74%), Postives = 82/174 (47.13%), Query Frame = 0


Query: 139 ADSETTDSDLCSKPTPKEAGVKGTMSIPSSHVRK-----------NHLSSSIIGDPSAGI 198
           AD+ T+ S +   P+          S+ +SH R            + ++S  I D S  +
Sbjct: 5   ADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFL 64

Query: 199 TTRKKDKVDYSKVIADLCYTSAIEPTSVKAVLKDEFWINAMQEELLQFKRKNVWALVPKP 258
           +  K   + +S ++   C   A EP++     +   W  AM +E+   +  + W +   P
Sbjct: 65  SYEKVSPLYHSFLV---CIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLP 124

Query: 259 DEANIIRTKWIFKNKADESGCVTRNKSRFMAQGYAQIEGIDFDETFAPVARLVS 302
                I  KW++K K +  G + R K+R +A+GY Q EGIDF ETF+PV +L S
Sbjct: 125 PNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTS 175

The following BLAST results are available for this feature:

BLAST of Cmc07g0194981 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026048.1	2.6e-174	100.00	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK22846.1	3.4e-174	99.67	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0035996.1	2.6e-134	78.95	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK30409.1	1.1e-111	69.74	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK21443.1	2.0e-105	63.41	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0194981 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.2e-22	25.88	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	5.9e-20	24.81	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	3.0e-16	43.75	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	5.9e-12	22.74	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.9e-12	20.57	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc07g0194981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIP3	1.3e-174	100.00	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G...	[more]
A0A5D3DGW5	1.6e-174	99.67	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G...	[more]
A0A5A7T197	1.3e-134	78.95	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G0...	[more]
A0A5D3E3N7	5.2e-112	69.74	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G...	[more]
A0A5D3DCZ8	9.5e-106	63.41	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G...	[more]

BLAST of Cmc07g0194981 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00820.1	2.1e-17	43.75	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	1.9e-13	28.74	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 239..301 e-value: 5.9E-15 score: 55.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..167
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 3..302
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0194981.1	Cmc07g0194981.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding