Cmc07g0194851 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0194851
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr07: 17777839 .. 17778732 (-)
RNA-Seq Expression	Cmc07g0194851
Synteny	Cmc07g0194851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAATACTTTTCATGATTCAGTGGTAGGCGGACACTTTGGATTCCTAAGAACATATAAAAGACTAGCAAGTGAGCTATATTGGGAAGGGATGAAATCTGATGTAAAAAAACATTGTGAATCATGCATAACTTGCCAACGTAACAAAAGTTTGGCCCTATCACCAGCCGGGCTGTTAGTACCACTAGAAATACCTCATCAAGTTTGGAGCGACATTTCTATGGACTTCATTGATGGTTTACCTAAAGCAAAGGGATGTGATGTAATACTAGTTGTAGTAGATCGGCTCAGCAAATACAGTCACTTTTTGGCCCTTAAACACCCTTACACAGCTAAGTTAGTAGCATATATTTTTGTAAAAGAAATAGTCCGATTACACGGATTCCCTTCCTCCATTGTTTCTGACCGGGACAAGATATTTCTCAGCCATTTTTGGAATGAATTATTCAAAATGGGGGGTACTAAACTCAGGAAAAGCACAACATATCATCCACAATCCGATGGACAAACGGAAGTGGTAAATAGAGGCTTGGAAACTTATCTTAGATGTTTCTCTAATGAACGTCTGAGAGAATGGATTTTATGGCTGTCGTGGGTCGAGTATTGGTACAATACTACTTATCAGAAAGCACTTGATATGTCTCCATTCCAAGTGGTGTACGGTCGTAAACCACCAACCTTATTGTCATACGGGGAAAGAGGGACTTCCCATTCATTAATAGATGAACAGCTGAGAGAACGAGATGTGGCATTAGATGCATTACGGGAACATTTGTTGTTAGCACAACAACAAATGAAATTATATGCTGACCGAAAAAGGCGACATGTTGAGTTTCAGATTGATGAATTGGTGTTGCTTAAGATTCGTCCGTATCGACAAGCCATTTTGTGA

mRNA sequence

ATGTTAAATACTTTTCATGATTCAGTGGTAGGCGGACACTTTGGATTCCTAAGAACATATAAAAGACTAGCAAGTGAGCTATATTGGGAAGGGATGAAATCTGATGTAAAAAAACATTGTGAATCATGCATAACTTGCCAACGTAACAAAAGTTTGGCCCTATCACCAGCCGGGCTGTTAGTACCACTAGAAATACCTCATCAAGTTTGGAGCGACATTTCTATGGACTTCATTGATGGTTTACCTAAAGCAAAGGGATGTGATGTAATACTAGTTGTAGTAGATCGGCTCAGCAAATACAGTCACTTTTTGGCCCTTAAACACCCTTACACAGCTAAGTTAGTAGCATATATTTTTGTAAAAGAAATAGTCCGATTACACGGATTCCCTTCCTCCATTGTTTCTGACCGGGACAAGATATTTCTCAGCCATTTTTGGAATGAATTATTCAAAATGGGGGGTACTAAACTCAGGAAAAGCACAACATATCATCCACAATCCGATGGACAAACGGAAGTGGTAAATAGAGGCTTGGAAACTTATCTTAGATGTTTCTCTAATGAACGTCTGAGAGAATGGATTTTATGGCTGTCGTGGGTCGAGTATTGGTACAATACTACTTATCAGAAAGCACTTGATATGTCTCCATTCCAAGTGGTGTACGGTCGTAAACCACCAACCTTATTGTCATACGGGGAAAGAGGGACTTCCCATTCATTAATAGATGAACAGCTGAGAGAACGAGATGTGGCATTAGATGCATTACGGGAACATTTGTTGTTAGCACAACAACAAATGAAATTATATGCTGACCGAAAAAGGCGACATGTTGAGTTTCAGATTGATGAATTGGTGTTGCTTAAGATTCGTCCGTATCGACAAGCCATTTTGTGA

Coding sequence (CDS)

ATGTTAAATACTTTTCATGATTCAGTGGTAGGCGGACACTTTGGATTCCTAAGAACATATAAAAGACTAGCAAGTGAGCTATATTGGGAAGGGATGAAATCTGATGTAAAAAAACATTGTGAATCATGCATAACTTGCCAACGTAACAAAAGTTTGGCCCTATCACCAGCCGGGCTGTTAGTACCACTAGAAATACCTCATCAAGTTTGGAGCGACATTTCTATGGACTTCATTGATGGTTTACCTAAAGCAAAGGGATGTGATGTAATACTAGTTGTAGTAGATCGGCTCAGCAAATACAGTCACTTTTTGGCCCTTAAACACCCTTACACAGCTAAGTTAGTAGCATATATTTTTGTAAAAGAAATAGTCCGATTACACGGATTCCCTTCCTCCATTGTTTCTGACCGGGACAAGATATTTCTCAGCCATTTTTGGAATGAATTATTCAAAATGGGGGGTACTAAACTCAGGAAAAGCACAACATATCATCCACAATCCGATGGACAAACGGAAGTGGTAAATAGAGGCTTGGAAACTTATCTTAGATGTTTCTCTAATGAACGTCTGAGAGAATGGATTTTATGGCTGTCGTGGGTCGAGTATTGGTACAATACTACTTATCAGAAAGCACTTGATATGTCTCCATTCCAAGTGGTGTACGGTCGTAAACCACCAACCTTATTGTCATACGGGGAAAGAGGGACTTCCCATTCATTAATAGATGAACAGCTGAGAGAACGAGATGTGGCATTAGATGCATTACGGGAACATTTGTTGTTAGCACAACAACAAATGAAATTATATGCTGACCGAAAAAGGCGACATGTTGAGTTTCAGATTGATGAATTGGTGTTGCTTAAGATTCGTCCGTATCGACAAGCCATTTTGTGA

Protein sequence

MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLLVPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFVKEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLETYLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSLIDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL

Homology

[Close]

BLAST of Cmc07g0194851 vs. NCBI nr
Match: KAA0042014.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK17950.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 562.4 bits (1448), Expect = 2.4e-156
Identity = 271/297 (91.25%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           MLNTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPA LL
Sbjct: 194 MLNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPARLL 253

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           +PLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVD+LSKYSHFLALKHPYTAK  A IFV
Sbjct: 254 IPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDQLSKYSHFLALKHPYTAKSAAEIFV 313

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFPSSIVSDRDK+FLSHFWNE+FKM GTKLRKST YHPQ+DGQTE+VNRGLET
Sbjct: 314 KEIVRLHGFPSSIVSDRDKVFLSHFWNEMFKMAGTKLRKSTAYHPQTDGQTEMVNRGLET 373

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF  ER REWILWL W EYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGER  S+S 
Sbjct: 374 YLRCFCRERPREWILWLPWAEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERRPSNSS 433

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
           +DEQL+ERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQ  L
Sbjct: 434 VDEQLKERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQTTL 490

[Close]

BLAST of Cmc07g0194851 vs. NCBI nr
Match: KAA0064689.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYK19901.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 546.2 bits (1406), Expect = 1.7e-151
Identity = 264/295 (89.49%), Postives = 277/295 (93.90%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           +LNTFHDSVVGGH GFLRT KRLASELYWEGMKSDVKKHCESCITCQRNKSLALSP GLL
Sbjct: 390 ILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLL 449

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           +PLEIPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFLALKHPYTAK VA IFV
Sbjct: 450 MPLEIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFV 509

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFP+SIVS+RDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 510 KEIVRLHGFPTSIVSNRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 569

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF +ER +EWILWL W EYWYNTTYQKAL  SPFQVVYGRKPPTLLSYGER TS+S 
Sbjct: 570 YLRCFCSERPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSS 629

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQA 296
           IDEQL+ERDVALDALREHLLLAQQQMKLYADRKRR VEFQ+ ELVLLKIRPYRQA
Sbjct: 630 IDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVGELVLLKIRPYRQA 684

[Close]

BLAST of Cmc07g0194851 vs. NCBI nr
Match: KAA0047643.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 545.4 bits (1404), Expect = 3.0e-151
Identity = 261/297 (87.88%), Postives = 279/297 (93.94%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           +LNTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSPAGLL
Sbjct: 383 ILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL 442

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           VPL+IPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFL LKHPYTAK VA  FV
Sbjct: 443 VPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFV 502

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFP+SIVSDRDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 503 KEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 562

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF +ER +EWI+WL W EYWYNTTYQKAL  SPFQVVYGRKPPTLLSYGER TS+S 
Sbjct: 563 YLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPTLLSYGERRTSNSS 622

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
           IDEQL+E++VALDALREHLLLAQQQMKLYADRKRR VEFQ++ELVLLKIRPYRQA L
Sbjct: 623 IDEQLKEQNVALDALREHLLLAQQQMKLYADRKRRQVEFQVNELVLLKIRPYRQATL 679

[Close]

BLAST of Cmc07g0194851 vs. NCBI nr
Match: KAA0060678.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150
Identity = 262/297 (88.22%), Postives = 277/297 (93.27%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           +LNTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKH E+C+TCQRNKSLALSPAGLL
Sbjct: 461 ILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHSEACVTCQRNKSLALSPAGLL 520

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           VPL+IPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFLALKHPYTAK VA  FV
Sbjct: 521 VPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAESFV 580

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFP+SIVSDRDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 581 KEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 640

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF +E  +EWI+WL W EYWYNTTYQKAL  SPFQVVYGRKPP LLSYGER TS+S 
Sbjct: 641 YLRCFCSECPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSS 700

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
           IDEQL+ERDVALDALREHLLLAQQQMKLYADRKRR VEFQ+DELVLLKIRPYRQA L
Sbjct: 701 IDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRQATL 757

[Close]

BLAST of Cmc07g0194851 vs. NCBI nr
Match: TYK23779.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 542.3 bits (1396), Expect = 2.5e-150
Identity = 259/297 (87.21%), Postives = 277/297 (93.27%), Query Frame = 0


Query: 1    MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
            ++NTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLL
Sbjct: 1031 IMNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPVGLL 1090

Query: 61   VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
            +PL+IPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFLALKHPYTAK VA  FV
Sbjct: 1091 MPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAESFV 1150

Query: 121  KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
            KEIVRLHGFP+SIVSDRDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 1151 KEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 1210

Query: 181  YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
            YLRCF +ER +EWILWL W EYWYNTTYQKAL  SPFQVVYG KPP LLSYGER TS+S 
Sbjct: 1211 YLRCFCSERPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGHKPPALLSYGERRTSNSS 1270

Query: 241  IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
            IDEQL+ER+VALDALREHLLLAQQQMKLYADRKRR VEFQ+D+LVLLKIRPYRQA L
Sbjct: 1271 IDEQLKERNVALDALREHLLLAQQQMKLYADRKRRQVEFQVDDLVLLKIRPYRQATL 1327

[Close]

BLAST of Cmc07g0194851 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-37
Identity = 95/291 (32.65%), Postives = 152/291 (52.23%), Query Frame = 0


Query: 1    MLNTFHD-SVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGL 60
            ++  +HD ++ GGHFG   T  +++   YW  ++  + ++  +C+ CQ  KS      GL
Sbjct: 1099 VMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGL 1158

Query: 61   LVPLEIPHQVWSDISMDFIDGL-PKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYI 120
            L PL I    W DISMDF+ GL P +   ++ILVVVDR SK +HF+A +    A  +  +
Sbjct: 1159 LQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDL 1218

Query: 121  FVKEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGL 180
              + I   HGFP +I SDRD    +  + EL K  G K   S+  HPQ+DGQ+E   + L
Sbjct: 1219 LFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTL 1278

Query: 181  ETYLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKP--PTLLSYGERGT 240
               LR +++  ++ W ++L  +E+ YN+T  + L  SPF++  G  P  P + S  E   
Sbjct: 1279 NRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNA 1338

Query: 241  SHSLIDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLL 288
                  E  +         +E L  AQ +M+   +++R+ +   I + VL+
Sbjct: 1339 RSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLV 1389

[Close]

BLAST of Cmc07g0194851 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 8.7e-37
Identity = 95/291 (32.65%), Postives = 151/291 (51.89%), Query Frame = 0


Query: 1    MLNTFHD-SVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGL 60
            ++  +HD ++ GGHFG   T  +++   YW  ++  + ++  +C+ CQ  KS      GL
Sbjct: 1125 VMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGL 1184

Query: 61   LVPLEIPHQVWSDISMDFIDGL-PKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYI 120
            L PL I    W DISMDF+ GL P +   ++ILVVVDR SK +HF+A +    A  +  +
Sbjct: 1185 LQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDL 1244

Query: 121  FVKEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGL 180
              + I   HGFP +I SDRD    +  + EL K  G K   S+  HPQ+DGQ+E   + L
Sbjct: 1245 LFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTL 1304

Query: 181  ETYLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKP--PTLLSYGERGT 240
               LR + +  ++ W ++L  +E+ YN+T  + L  SPF++  G  P  P + S  E   
Sbjct: 1305 NRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNA 1364

Query: 241  SHSLIDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLL 288
                  E  +         +E L  AQ +M+   +++R+ +   I + VL+
Sbjct: 1365 RSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLV 1415

[Close]

BLAST of Cmc07g0194851 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 87/261 (33.33%), Postives = 136/261 (52.11%), Query Frame = 0


Query: 29   WEGMKSDVKKHCESCITCQRNKSLALSPAGLLVPLEIPHQVWSDISMDFIDGLPKAKGCD 88
            W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G +
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 89   VILVVVDRLSKYSHFLALKHPYTAKLVAYIFVKEIVRLHGFPSSIVSDRDKIFLSHFWNE 148
             + VVVDR SK +  +      TA+  A +F + ++   G P  I++D D IF S  W +
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 149  LFKMGGTKLRKSTTYHPQSDGQTEVVNRGLETYLRCFSNERLREWILWLSWVEYWYNTTY 208
                    ++ S  Y PQ+DGQTE  N+ +E  LRC  +     W+  +S V+  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 209  QKALDMSPFQVVYGRKPPTLLSYGERGTSHSLIDEQLRERDVALDALREHLLLAQQQMKL 268
              A  M+PF++V+   P   LS  E  +     DE  +E       ++EHL     +MK 
Sbjct: 1123 HSATQMTPFEIVHRYSP--ALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKK 1182

Query: 269  YADRKRRHV-EFQIDELVLLK 289
            Y D K + + EFQ  +LV++K
Sbjct: 1183 YFDMKIQEIEEFQPGDLVMVK 1201

[Close]

BLAST of Cmc07g0194851 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 87/261 (33.33%), Postives = 136/261 (52.11%), Query Frame = 0


Query: 29   WEGMKSDVKKHCESCITCQRNKSLALSPAGLLVPLEIPHQVWSDISMDFIDGLPKAKGCD 88
            W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G +
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 89   VILVVVDRLSKYSHFLALKHPYTAKLVAYIFVKEIVRLHGFPSSIVSDRDKIFLSHFWNE 148
             + VVVDR SK +  +      TA+  A +F + ++   G P  I++D D IF S  W +
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 149  LFKMGGTKLRKSTTYHPQSDGQTEVVNRGLETYLRCFSNERLREWILWLSWVEYWYNTTY 208
                    ++ S  Y PQ+DGQTE  N+ +E  LRC  +     W+  +S V+  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 209  QKALDMSPFQVVYGRKPPTLLSYGERGTSHSLIDEQLRERDVALDALREHLLLAQQQMKL 268
              A  M+PF++V+   P   LS  E  +     DE  +E       ++EHL     +MK 
Sbjct: 1123 HSATQMTPFEIVHRYSP--ALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKK 1182

Query: 269  YADRKRRHV-EFQIDELVLLK 289
            Y D K + + EFQ  +LV++K
Sbjct: 1183 YFDMKIQEIEEFQPGDLVMVK 1201

[Close]

BLAST of Cmc07g0194851 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 87/261 (33.33%), Postives = 136/261 (52.11%), Query Frame = 0


Query: 29   WEGMKSDVKKHCESCITCQRNKSLALSPAGLLVPLEIPHQVWSDISMDFIDGLPKAKGCD 88
            W+G++  ++++ ++C TCQ NKS    P G L P+    + W  +SMDFI  LP++ G +
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 89   VILVVVDRLSKYSHFLALKHPYTAKLVAYIFVKEIVRLHGFPSSIVSDRDKIFLSHFWNE 148
             + VVVDR SK +  +      TA+  A +F + ++   G P  I++D D IF S  W +
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 149  LFKMGGTKLRKSTTYHPQSDGQTEVVNRGLETYLRCFSNERLREWILWLSWVEYWYNTTY 208
                    ++ S  Y PQ+DGQTE  N+ +E  LRC  +     W+  +S V+  YN   
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 209  QKALDMSPFQVVYGRKPPTLLSYGERGTSHSLIDEQLRERDVALDALREHLLLAQQQMKL 268
              A  M+PF++V+   P   LS  E  +     DE  +E       ++EHL     +MK 
Sbjct: 1123 HSATQMTPFEIVHRYSP--ALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKK 1182

Query: 269  YADRKRRHV-EFQIDELVLLK 289
            Y D K + + EFQ  +LV++K
Sbjct: 1183 YFDMKIQEIEEFQPGDLVMVK 1201

[Close]

BLAST of Cmc07g0194851 vs. ExPASy TrEMBL
Match: A0A5D3D2N9 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002470 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.1e-156
Identity = 271/297 (91.25%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           MLNTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPA LL
Sbjct: 194 MLNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPARLL 253

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           +PLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVD+LSKYSHFLALKHPYTAK  A IFV
Sbjct: 254 IPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDQLSKYSHFLALKHPYTAKSAAEIFV 313

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFPSSIVSDRDK+FLSHFWNE+FKM GTKLRKST YHPQ+DGQTE+VNRGLET
Sbjct: 314 KEIVRLHGFPSSIVSDRDKVFLSHFWNEMFKMAGTKLRKSTAYHPQTDGQTEMVNRGLET 373

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF  ER REWILWL W EYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGER  S+S 
Sbjct: 374 YLRCFCRERPREWILWLPWAEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERRPSNSS 433

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
           +DEQL+ERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQ  L
Sbjct: 434 VDEQLKERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQTTL 490

[Close]

BLAST of Cmc07g0194851 vs. ExPASy TrEMBL
Match: A0A5A7VGU4 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00100 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 8.5e-152
Identity = 264/295 (89.49%), Postives = 277/295 (93.90%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           +LNTFHDSVVGGH GFLRT KRLASELYWEGMKSDVKKHCESCITCQRNKSLALSP GLL
Sbjct: 390 ILNTFHDSVVGGHSGFLRTCKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPTGLL 449

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           +PLEIPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFLALKHPYTAK VA IFV
Sbjct: 450 MPLEIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAEIFV 509

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFP+SIVS+RDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 510 KEIVRLHGFPTSIVSNRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 569

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF +ER +EWILWL W EYWYNTTYQKAL  SPFQVVYGRKPPTLLSYGER TS+S 
Sbjct: 570 YLRCFCSERPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSS 629

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQA 296
           IDEQL+ERDVALDALREHLLLAQQQMKLYADRKRR VEFQ+ ELVLLKIRPYRQA
Sbjct: 630 IDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVGELVLLKIRPYRQA 684

[Close]

BLAST of Cmc07g0194851 vs. ExPASy TrEMBL
Match: A0A5A7TVR3 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001270 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151
Identity = 261/297 (87.88%), Postives = 279/297 (93.94%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           +LNTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSPAGLL
Sbjct: 383 ILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL 442

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           VPL+IPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFL LKHPYTAK VA  FV
Sbjct: 443 VPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFV 502

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFP+SIVSDRDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 503 KEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 562

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF +ER +EWI+WL W EYWYNTTYQKAL  SPFQVVYGRKPPTLLSYGER TS+S 
Sbjct: 563 YLRCFCSERPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPTLLSYGERRTSNSS 622

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
           IDEQL+E++VALDALREHLLLAQQQMKLYADRKRR VEFQ++ELVLLKIRPYRQA L
Sbjct: 623 IDEQLKEQNVALDALREHLLLAQQQMKLYADRKRRQVEFQVNELVLLKIRPYRQATL 679

[Close]

BLAST of Cmc07g0194851 vs. ExPASy TrEMBL
Match: A0A5A7UZJ7 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005750 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.5e-151
Identity = 262/297 (88.22%), Postives = 277/297 (93.27%), Query Frame = 0


Query: 1   MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
           +LNTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKH E+C+TCQRNKSLALSPAGLL
Sbjct: 461 ILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHSEACVTCQRNKSLALSPAGLL 520

Query: 61  VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
           VPL+IPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFLALKHPYTAK VA  FV
Sbjct: 521 VPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAESFV 580

Query: 121 KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
           KEIVRLHGFP+SIVSDRDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 581 KEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 640

Query: 181 YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
           YLRCF +E  +EWI+WL W EYWYNTTYQKAL  SPFQVVYGRKPP LLSYGER TS+S 
Sbjct: 641 YLRCFCSECPKEWIMWLPWAEYWYNTTYQKALGQSPFQVVYGRKPPALLSYGERRTSNSS 700

Query: 241 IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
           IDEQL+ERDVALDALREHLLLAQQQMKLYADRKRR VEFQ+DELVLLKIRPYRQA L
Sbjct: 701 IDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRQATL 757

[Close]

BLAST of Cmc07g0194851 vs. ExPASy TrEMBL
Match: A0A5D3DKH5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001060 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 259/297 (87.21%), Postives = 277/297 (93.27%), Query Frame = 0


Query: 1    MLNTFHDSVVGGHFGFLRTYKRLASELYWEGMKSDVKKHCESCITCQRNKSLALSPAGLL 60
            ++NTFHDSVVGGH GFLRTYKRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLL
Sbjct: 1031 IMNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPVGLL 1090

Query: 61   VPLEIPHQVWSDISMDFIDGLPKAKGCDVILVVVDRLSKYSHFLALKHPYTAKLVAYIFV 120
            +PL+IPHQ+WSDISMDFIDGLPKAKG DVILVVVDRLSKYSHFLALKHPYTAK VA  FV
Sbjct: 1091 MPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLALKHPYTAKTVAESFV 1150

Query: 121  KEIVRLHGFPSSIVSDRDKIFLSHFWNELFKMGGTKLRKSTTYHPQSDGQTEVVNRGLET 180
            KEIVRLHGFP+SIVSDRDK+FLSHFWNELFKM GTKL+KST YHPQ+DGQTEVVNRGLET
Sbjct: 1151 KEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLET 1210

Query: 181  YLRCFSNERLREWILWLSWVEYWYNTTYQKALDMSPFQVVYGRKPPTLLSYGERGTSHSL 240
            YLRCF +ER +EWILWL W EYWYNTTYQKAL  SPFQVVYG KPP LLSYGER TS+S 
Sbjct: 1211 YLRCFCSERPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGHKPPALLSYGERRTSNSS 1270

Query: 241  IDEQLRERDVALDALREHLLLAQQQMKLYADRKRRHVEFQIDELVLLKIRPYRQAIL 298
            IDEQL+ER+VALDALREHLLLAQQQMKLYADRKRR VEFQ+D+LVLLKIRPYRQA L
Sbjct: 1271 IDEQLKERNVALDALREHLLLAQQQMKLYADRKRRQVEFQVDDLVLLKIRPYRQATL 1327

The following BLAST results are available for this feature:

BLAST of Cmc07g0194851 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042014.1	2.4e-156	91.25	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK17950.1 t...	[more]
KAA0064689.1	1.7e-151	89.49	putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYK19901.1 put...	[more]
KAA0047643.1	3.0e-151	87.88	putative retroelement pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0060678.1	1.1e-150	88.22	putative retroelement pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK23779.1	2.5e-150	87.21	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0194851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.9e-37	32.65	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	8.7e-37	32.65	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	1.5e-36	33.33	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.5e-36	33.33	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.5e-36	33.33	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0194851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2N9	1.1e-156	91.25	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7VGU4	8.5e-152	89.49	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TVR3	1.4e-151	87.88	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7UZJ7	5.5e-151	88.22	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3DKH5	1.2e-150	87.21	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc07g0194851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 1..50 e-value: 1.1E-13 score: 53.2
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 4..230
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 2..51 e-value: 3.6E-18 score: 65.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 59..263 e-value: 1.1E-48 score: 167.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 62..224 score: 18.533859
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 63..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0194851.1	Cmc07g0194851.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0015074	DNA integration
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0047938	glucose-6-phosphate 1-epimerase activity
molecular_function	GO:0003676	nucleic acid binding