Cmc07g0194811 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0194811
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribonuclease T(2)
Location	CMiso1.1chr07: 17690567 .. 17693603 (+)
RNA-Seq Expression	Cmc07g0194811
Synteny	Cmc07g0194811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTTTCTCTCTTTATCCCATTATTATATGATGATGACCATTACACATGTTACCATTACTATAGTACGGTGAGTTTTCTTTTTTCTTTTTATTTTTTACTTTTCTAATTTCAATTTTTTTCTCCTTAAAAATTTGATATCAAATTTGATATCGTATGTTTTTTTTTCTTTTAACTTAAATAGAGAATCGTAAAAAATGACGATTTTGATAAAATACACCAAAATTTTAGATTATCTCAATAATAGATATTAATAAACACTTATTTACTTCTTTTATCAGTCATATCGATAAACAATATTAAAAATATATCAATATTTATTAATGATAAAATCTAAAATTTTATTATATGATATAAATATTTTAATTTATTTTATTATATTAAAAAATGTGCCTATCTTAAATTTAAAAAGAATTTAAAAGTATTTATTTTGCAGAGAAGCATGGGACATGTGCAGCTCCCGTGCTTGTGGGAGAATATGATTACTTTTTGACAGCCCTCACCATCTTCTCCAAGTACAATGTCACGGTACGCTATTTCATCTTTTCCTTTTTCCTTTTTCCTTTAATTATTTCTTCATAGTTTTTTTCTTAATTTTTTTTATAATATCTATTATAATATTAGATTAATTTTTATAAATGTAACAAAATACCAAACTATTTACGATCCGTATAATAAAGTTTATTAAGTTAACAATTTTTTAAATATTTCAAATTTCGCTACAATTCCTTTCTTCGTCTTCTTCCTCTATGTGATTTTTTTATTGTATTTTTTTCTACTGTCATTTCTTTTCATAAATCTTTTTTCTTTTTTTATTCTTTTTTTTAGGTCATTTAATCTTTAAAGTTTATTAAGTTAACAATTTTTTAAATATTTCAAATTTCGCTACAATTCCTTTCTTCGTCTTCTTCCTCTATGTGATTTTTTTATTGTATTTTTTTCTACTGTCATTTCTTTTCATAAATCTTTTTTCTTTTTTTATTCTTTTTTTTAGGTCATTTAATCTTTTTATCGTCTTTTTTCTTTTTCTTTTCCTTTTTTCGCTACGACTTTTTCCCATCTTCTTTCTTCTTTTCCTCTTATATTTTTCTGTTTCGATTTTTTTCCATTGTCTTTCTTCTTTTCCTCTCATTTTTTTCTGCTGCGATTTCTTTCCATCATCTTTCTTCGTTTCCTTTTCCTTTTTTACATCGTTTAAGTTTGGGTAACCAAACCTAAACCACCATGTACAAAGAAAATAGCAAAATTAAAACATCGTGTATAAAGAATATTGAAAAAAATCATTTAGATTGGAGTAGTCAAATGTAAACAATAGTGTAAAAAAAGTAAAGGGTCGTGTAAAGAAAATAAATCATCATGTAGACAAATCTAAACGATCGTGTACCAAAAGAATAAAAAAAATCGTTTAGTCAAATCTAAACGATCGTGTAATAAAGAATTTTGAAAAAATAAACGATAGCGTAAACAAATCTAAACAATCGTGTAAAAAAAAATAAACGATCTTGTTGTACCAAAAGAATTAAAAAAAAAATCGTTTAACCAAATCTAAACAATTGTGTACCAAATTTTGAAAAAAGAAATCGTTTAGATTTGGGTCCAAATCTAAATGATCAAATATAAACTATCGTGTAACTAAATTTAAATGTAATCAAATAAAACGATCGTGTAACAAAATTGAACAATAGAATTAAAAAAAATAAATTGTACCAAAATCTAAACGACTAAATATAATCGATTGTGTACGAAACAATAGTCAAACATAAACGATCATGTACCAAATATATTACGTGCGCGTTGTTGGCGGCGTGGTTGAATTTTTTGTATTTTTCATGGTGGACACGTGAGTTTTTCCCATTTTTAGAATTGTTTTATACAATATAAATATTTTGTCGGTTTGTTATATTTTATAAAAGACCGCGTAATACTATTATAGAAAAAATAAATTCTAACATTGAGTTTGGGTATTAAATAATTTGGGTGTCTTTTGTTAACAGAAAGTTTTGAGTGAAGGTGGATTTGTAGCTTCCAATACTGAAAAGTATCCAATTGAAGATGTAATAGCTGCAATTAAGAATAAATTCTATAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGGTAACGGGTTTCCAATTTTTATCTGTTTAAGTTTTATGAACCGTTGATACTATATTATATGATCAATATAGAGAGTATTCTTAACAAAATTACATCTTTCTACAATAAAATAGTTGAATTCTTAGTTAATTTCAAGAAGAAAAAAATTACAATTTTTTTAAAACCTATATTTCTTTTCATATCAGTAAGAATTAGAATAAAATTTTAGATAGATTAAAGAGGTATAAATAGAATGACTATAAGTTAATTTTCCAAAATTTTAAAAAAATCGAATAGTTATGAAACGTAGCCTAATATTATTCATAATAACAAGATACTAACCAAAGTAAATCTCTACTTGTTATAGCCACGTGACTGTAATCTACAGCATTCATGCCCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGGTATGTTTTTCCTTTTCTTCATTAAAAGAAATTAATTAGTCTGATTGCATTTTAGATACTATGTATCCAAATAATTACTAAACTCAAGAGCCTAAGTTAAGCTAATAATTAATCTATGATATACTTAATCTTGTTTAATATATTGTTTTTAACATATTAATTGTATTATTTGTGATGCAGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAATCTTTTTTTTCTAAACCATAAAAGAGATGGCTAGAGAAACCCTTTAATTATTAACATTTTGGCCATGTCTTTTGGGCAATGCCTTTTGATGTTAAGCTCACCCAATTTCTCTGAGTTGAACGGTTCCATTATGCATGTGGGTTTGCTTTTCCAAATAAAAGATGTAGTAGTTAATAATAAAACAATAAGTTGATCAAATTGGATGTGTTTTCAATTTATTATA

mRNA sequence

TTCTTTTTCTCTCTTTATCCCATTATTATATGATGATGACCATTACACATGTTACCATTACTATAAAGCATGGGACATGTGCAGCTCCCGTGCTTGTGGGAGAATATGATTACTTTTTGACAGCCCTCACCATCTTCTCCAAGTACAATGTCACGAAAGTTTTGAGTGAAGGTGGATTTGTAGCTTCCAATACTGAAAAGTATCCAATTGAAGATGTAATAGCTGCAATTAAGAATAAATTCTATAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGCCACGTGACTGTAATCTACAGCATTCATGCCCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAATCTTTTTTTTCTAAACCATAAAAGAGATGGCTAGAGAAACCCTTTAATTATTAACATTTTGGCCATGTCTTTTGGGCAATGCCTTTTGATGTTAAGCTCACCCAATTTCTCTGAGTTGAACGGTTCCATTATGCATGTGGGTTTGCTTTTCCAAATAAAAGATGTAGTAGTTAATAATAAAACAATAAGTTGATCAAATTGGATGTGTTTTCAATTTATTATA

Coding sequence (CDS)

ATGATGATGACCATTACACATGTTACCATTACTATAAAGCATGGGACATGTGCAGCTCCCGTGCTTGTGGGAGAATATGATTACTTTTTGACAGCCCTCACCATCTTCTCCAAGTACAATGTCACGAAAGTTTTGAGTGAAGGTGGATTTGTAGCTTCCAATACTGAAAAGTATCCAATTGAAGATGTAATAGCTGCAATTAAGAATAAATTCTATAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGCCACGTGACTGTAATCTACAGCATTCATGCCCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAA

Protein sequence

MMMTITHVTITIKHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFYNATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWIADVEEII

Homology

[Close]

BLAST of Cmc07g0194811 vs. NCBI nr
Match: XP_008462866.1 (PREDICTED: ribonuclease 2-like [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 6.6e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY
Sbjct: 140 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 199

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI
Sbjct: 200 NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 259

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 260 ADVEEII 266

[Close]

BLAST of Cmc07g0194811 vs. NCBI nr
Match: KAA0061176.1 (ribonuclease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 6.6e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY
Sbjct: 138 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 197

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI
Sbjct: 198 NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 257

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 258 ADVEEII 264

[Close]

BLAST of Cmc07g0194811 vs. NCBI nr
Match: TYK29936.1 (ribonuclease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 6.6e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY
Sbjct: 122 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 181

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI
Sbjct: 182 NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 241

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 242 ADVEEII 248

[Close]

BLAST of Cmc07g0194811 vs. NCBI nr
Match: XP_004137162.1 (ribonuclease 2 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 114/127 (89.76%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPV+VGEYDYFLT +TIFSKYNVTKVLS+ GFVASNTEKYPIEDV+AAIKN+F 
Sbjct: 141 KHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVVAAIKNEFN 200

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKI+CAKKG VKELWLCFDKSFEPRDCNL +SCPDFIK PTYEPQEPNKVEGAIPWI
Sbjct: 201 NATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFIKFPTYEPQEPNKVEGAIPWI 260

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 261 ADVEEII 267

[Close]

BLAST of Cmc07g0194811 vs. NCBI nr
Match: XP_038876700.1 (ribonuclease 2-like [Benincasa hispida])

HSP 1 Score: 245.4 bits (625), Expect = 3.0e-61
Identity = 113/127 (88.98%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPV+VGEYDYFLT LTIFSKYNVTKVL++ GFVASNTEKYPIEDV+AAIKN+F 
Sbjct: 142 KHGTCAAPVIVGEYDYFLTTLTIFSKYNVTKVLNDAGFVASNTEKYPIEDVVAAIKNEF- 201

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           N+TPKITCAKKGVVKELW+CFDKSFEPRDC+LQ+SCPDFIKLPTY+PQEPNKVEGAIPWI
Sbjct: 202 NSTPKITCAKKGVVKELWICFDKSFEPRDCDLQNSCPDFIKLPTYDPQEPNKVEGAIPWI 261

Query: 133 ADVEEII 140
           AD EEII
Sbjct: 262 ADAEEII 267

[Close]

BLAST of Cmc07g0194811 vs. ExPASy Swiss-Prot
Match: P42814 (Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-25
Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTC++PV   EY+YFLT L ++ K+NVT VL + G+VASN+EKYP+  ++ AI+N F+
Sbjct: 132 KHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFH 191

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDC------NLQHSCPDFIKLPTYEP 120
             TP++ C K+  + E+ +CF K F+PRDC        + SCP ++ LP Y P
Sbjct: 192 -ITPEVVC-KRDAIDEIRICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEYTP 242

[Close]

BLAST of Cmc07g0194811 vs. ExPASy Swiss-Prot
Match: Q7M456 (Ribonuclease Oy OS=Crassostrea gigas OX=29159 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-08
Identity = 36/109 (33.03%), Postives = 52/109 (47.71%), Query Frame = 0


Query: 13  KHGTCAA--PVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNK 72
           KHGTCA   P    E  YF   L + +KYN++++L   G + S T  Y I +  AA+K +
Sbjct: 92  KHGTCATSLPATSNELKYFGMGLKLHAKYNISRILVNQGILPSKTAGYMINETEAAVKRE 151

Query: 73  FYNATPKITC------AKKGVVKELWLCFDKSFEPRDCNLQH----SCP 110
                  I C       KK ++ E+ +C  K FE   CN +     +CP
Sbjct: 152 L-GVDAVIECVYDKEKTKKQLLYEISICLTKEFELISCNKKEVSETTCP 199

[Close]

BLAST of Cmc07g0194811 vs. ExPASy TrEMBL
Match: A0A5D3E236 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00240 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY
Sbjct: 122 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 181

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI
Sbjct: 182 NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 241

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 242 ADVEEII 248

[Close]

BLAST of Cmc07g0194811 vs. ExPASy TrEMBL
Match: A0A5A7V3T6 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00520 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY
Sbjct: 138 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 197

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI
Sbjct: 198 NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 257

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 258 ADVEEII 264

[Close]

BLAST of Cmc07g0194811 vs. ExPASy TrEMBL
Match: A0A1S3CHX1 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103501148 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY
Sbjct: 140 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 199

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI
Sbjct: 200 NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 259

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 260 ADVEEII 266

[Close]

BLAST of Cmc07g0194811 vs. ExPASy TrEMBL
Match: A0A0A0L0P9 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_4G109540 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 114/127 (89.76%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPV+VGEYDYFLT +TIFSKYNVTKVLS+ GFVASNTEKYPIEDV+AAIKN+F 
Sbjct: 141 KHGTCAAPVIVGEYDYFLTTITIFSKYNVTKVLSDAGFVASNTEKYPIEDVVAAIKNEFN 200

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKI+CAKKG VKELWLCFDKSFEPRDCNL +SCPDFIK PTYEPQEPNKVEGAIPWI
Sbjct: 201 NATPKISCAKKGAVKELWLCFDKSFEPRDCNLPNSCPDFIKFPTYEPQEPNKVEGAIPWI 260

Query: 133 ADVEEII 140
           ADVEEII
Sbjct: 261 ADVEEII 267

[Close]

BLAST of Cmc07g0194811 vs. ExPASy TrEMBL
Match: A0A6J1CGP7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011504 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53
Identity = 99/127 (77.95%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTCAAPV+VGE+DYFLT LTIFSKYNVTKVL++ GFVAS+TEKY + DV+AA+++ F 
Sbjct: 143 KHGTCAAPVIVGEFDYFLTTLTIFSKYNVTKVLNDAGFVASDTEKYALGDVVAAVQDAF- 202

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWI 132
           NATPKI+CAKKG VKELWLCFDK+F+PRDC+L +SCPDFIKLPTYEPQE NKVEGAIPW+
Sbjct: 203 NATPKISCAKKGAVKELWLCFDKTFQPRDCDLANSCPDFIKLPTYEPQEANKVEGAIPWM 262

Query: 133 ADVEEII 140
            D E II
Sbjct: 263 GDAEAII 268

[Close]

BLAST of Cmc07g0194811 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 13  KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 72
           KHGTC++PV   EY+YFLT L ++ K+NVT VL + G+VASN+EKYP+  ++ AI+N F+
Sbjct: 132 KHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFH 191

Query: 73  NATPKITCAKKGVVKELWLCFDKSFEPRDC------NLQHSCPDFIKLPTYEP 120
             TP++ C K+  + E+ +CF K F+PRDC        + SCP ++ LP Y P
Sbjct: 192 -ITPEVVC-KRDAIDEIRICFYKDFKPRDCVGSQDLTSRKSCPKYVSLPEYTP 242

[Close]

BLAST of Cmc07g0194811 vs. TAIR 10
Match: AT2G39780.2 (ribonuclease 2 )

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-14
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 44  VLSEGGFVASNTEKYPIEDVIAAIKNKFYNATPKITCAKKGVVKELWLCFDKSFEPRDC- 103
           VL + G+VASN+EKYP+  ++ AI+N F+  TP++ C K+  + E+ +CF K F+PRDC 
Sbjct: 131 VLYQAGYVASNSEKYPLGGIVTAIQNAFH-ITPEVVC-KRDAIDEIRICFYKDFKPRDCV 190

Query: 104 -----NLQHSCPDFIKLPTYEP 120
                  + SCP ++ LP Y P
Sbjct: 191 GSQDLTSRKSCPKYVSLPEYTP 210

The following BLAST results are available for this feature:

BLAST of Cmc07g0194811 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462866.1	6.6e-69	100.00	PREDICTED: ribonuclease 2-like [Cucumis melo]	[more]
KAA0061176.1	6.6e-69	100.00	ribonuclease 2-like [Cucumis melo var. makuwa]	[more]
TYK29936.1	6.6e-69	100.00	ribonuclease 2-like [Cucumis melo var. makuwa]	[more]
XP_004137162.1	2.1e-62	89.76	ribonuclease 2 [Cucumis sativus]	[more]
XP_038876700.1	3.0e-61	88.98	ribonuclease 2-like [Benincasa hispida]	[more]

BLAST of Cmc07g0194811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42814	2.1e-25	46.90	Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1	[more]
Q7M456	6.8e-08	33.03	Ribonuclease Oy OS=Crassostrea gigas OX=29159 PE=1 SV=1	[more]

BLAST of Cmc07g0194811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E236	3.2e-69	100.00	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00...	[more]
A0A5A7V3T6	3.2e-69	100.00	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00...	[more]
A0A1S3CHX1	3.2e-69	100.00	Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103501148 PE=3 SV=1	[more]
A0A0A0L0P9	1.0e-62	89.76	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_4G109540 PE=3 SV=1	[more]
A0A6J1CGP7	2.5e-53	77.95	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011504 PE=3 SV=1	[more]

BLAST of Cmc07g0194811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39780.1	1.5e-26	46.90	ribonuclease 2	[more]
AT2G39780.2	2.2e-14	42.68	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 12..119 e-value: 8.7E-31 score: 109.5
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 12..116
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 13..102 e-value: 2.0E-20 score: 73.7
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 13..104
None	No IPR available	PANTHER	PTHR11240:SF51	RIBONUCLEASE 2	coord: 13..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0194811.1	Cmc07g0194811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding