Cmc07g0194331 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0194331
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
LocationCMiso1.1chr07: 16912403 .. 16912990 (-)
RNA-Seq ExpressionCmc07g0194331
SyntenyCmc07g0194331
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGAGAAGATGACTACTTTAAATGATAATGGTATTTGGGATTTGGTATCTCGTCCTGCAGGAAAGAAGGCCATTGGTTGTAAATGGGTGTTTTTTATTAAGGTGAATCTTGATGGAATAGTGGCTCGATTGAAAGCCCGTCTTGTTGCCAAAGGTTATGCTCAAACCTATGGAATTGATTATTCATATACATTTTCTCCAATTGCCAAATTAACTTCAATTCGCCTATTTCTTTCCATGGCTACTACCCATAACTGGCCTTTGCATCAACTTGACATTAAGAACCCACCTAGGTTTGTCGTTCATGGGGAGAGTGATAAAGTATGTCGCCTTCAAAAATCTTTGTATAGTTTGAGACAGAGTCCACGTGCGTGGTTTGGTAAGTTTAGTCAAGCTCTTGTATGCTTTGCTGTGCAGAAGAGTACATCCGATCATTTTGTTTTCTATCGGCGATCTAATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATAATGCATCGAGTATTTCATCTCTCAAAACATTCCTTCAAGGTCAGTTCATACAAAAGATTTGGGTCAATTGA

mRNA sequence

ATGATTGAGAAGATGACTACTTTAAATGATAATGGTATTTGGGATTTGGTATCTCGTCCTGCAGGAAAGAAGGCCATTGGTTGTAAATGGGTGTTTTTTATTAAGGTGAATCTTGATGGAATAGTGGCTCGATTGAAAGCCCGTCTTGTTGCCAAAGGTTATGCTCAAACCTATGGAATTGATTATTCATATACATTTTCTCCAATTGCCAAATTAACTTCAATTCGCCTATTTCTTTCCATGGCTACTACCCATAACTGGCCTTTGCATCAACTTGACATTAAGAACCCACCTAGGTTTGTCGTTCATGGGGAGAGTGATAAAGTATGTCGCCTTCAAAAATCTTTGTATAGTTTGAGACAGAGTCCACGTGCGTGGTTTGGTAAGTTTAGTCAAGCTCTTGTATGCTTTGCTGTGCAGAAGAGTACATCCGATCATTTTGTTTTCTATCGGCGATCTAATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATAATGCATCGAGTATTTCATCTCTCAAAACATTCCTTCAAGGTCAGTTCATACAAAAGATTTGGGTCAATTGA

Coding sequence (CDS)

ATGATTGAGAAGATGACTACTTTAAATGATAATGGTATTTGGGATTTGGTATCTCGTCCTGCAGGAAAGAAGGCCATTGGTTGTAAATGGGTGTTTTTTATTAAGGTGAATCTTGATGGAATAGTGGCTCGATTGAAAGCCCGTCTTGTTGCCAAAGGTTATGCTCAAACCTATGGAATTGATTATTCATATACATTTTCTCCAATTGCCAAATTAACTTCAATTCGCCTATTTCTTTCCATGGCTACTACCCATAACTGGCCTTTGCATCAACTTGACATTAAGAACCCACCTAGGTTTGTCGTTCATGGGGAGAGTGATAAAGTATGTCGCCTTCAAAAATCTTTGTATAGTTTGAGACAGAGTCCACGTGCGTGGTTTGGTAAGTTTAGTCAAGCTCTTGTATGCTTTGCTGTGCAGAAGAGTACATCCGATCATTTTGTTTTCTATCGGCGATCTAATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATAATGCATCGAGTATTTCATCTCTCAAAACATTCCTTCAAGGTCAGTTCATACAAAAGATTTGGGTCAATTGA

Protein sequence

MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGIDYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKNPPRFVVHGESDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVDDIVITGNNASSISSLKTFLQGQFIQKIWVN
Homology
BLAST of Cmc07g0194331 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 157/206 (76.21%), Postives = 168/206 (81.55%), Query Frame = 0

Query: 1    MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
            MIE+MT L+DNG WDLVSRPAGKKAIGCKWVF +K+N DG VARLKARLVAKGYAQ YG 
Sbjct: 854  MIEEMTALDDNGTWDLVSRPAGKKAIGCKWVFAVKMNPDGTVARLKARLVAKGYAQIYGT 913

Query: 61   DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
            DYS TFSP+AKLTSIRLFLSMA T+ W LHQLDIKN               PP FV  GE
Sbjct: 914  DYSDTFSPVAKLTSIRLFLSMAATNKWSLHQLDIKNAFLHGDLQEEVYMEQPPGFVAQGE 973

Query: 121  SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
            SDKVCRL+KSLY L+QSPRAWFGKFSQALVCF ++KSTSDH VFYRRS  GIVLLVVYVD
Sbjct: 974  SDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIVLLVVYVD 1033

Query: 181  DIVITGNNASSISSLKTFLQGQFIQK 192
            DIVITGN+A  ISSLKTFLQGQF  K
Sbjct: 1034 DIVITGNDALGISSLKTFLQGQFYTK 1059

BLAST of Cmc07g0194331 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 157/206 (76.21%), Postives = 168/206 (81.55%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           MIE+MT L+DNG WDLVSRPAGKKAIGCKWVF +K+N DG VARLKARLVAKGYAQ YG 
Sbjct: 477 MIEEMTALDDNGTWDLVSRPAGKKAIGCKWVFAVKMNPDGTVARLKARLVAKGYAQIYGT 536

Query: 61  DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
           DYS TFSP+AKLTSIRLFLSMA T+ W LHQLDIKN               PP FV  GE
Sbjct: 537 DYSDTFSPVAKLTSIRLFLSMAATNKWSLHQLDIKNAFLHGDLQEEVYMEQPPGFVAQGE 596

Query: 121 SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
           SDKVCRL+KSLY L+QSPRAWFGKFSQALVCF ++KSTSDH VFYRRS  GIVLLVVYVD
Sbjct: 597 SDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIVLLVVYVD 656

Query: 181 DIVITGNNASSISSLKTFLQGQFIQK 192
           DIVITGN+A  ISSLKTFLQGQF  K
Sbjct: 657 DIVITGNDALGISSLKTFLQGQFYTK 682

BLAST of Cmc07g0194331 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 157/206 (76.21%), Postives = 168/206 (81.55%), Query Frame = 0

Query: 1    MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
            MIE+MT L+DNG WDLVSRPAGKKAIGCKWVF +K+N DG VARLKARLVAKGYAQ YG 
Sbjct: 869  MIEEMTALDDNGTWDLVSRPAGKKAIGCKWVFAVKMNPDGTVARLKARLVAKGYAQIYGT 928

Query: 61   DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
            DYS TFSP+AKLTSIRLFLSMA T+ W LHQLDIKN               PP FV  GE
Sbjct: 929  DYSDTFSPVAKLTSIRLFLSMAATNKWSLHQLDIKNAFLHGDLQEEVYMEQPPGFVAQGE 988

Query: 121  SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
            SDKVCRL+KSLY L+QSPRAWFGKFSQALVCF ++KSTSDH VFYRRS  GIVLLVVYVD
Sbjct: 989  SDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIVLLVVYVD 1048

Query: 181  DIVITGNNASSISSLKTFLQGQFIQK 192
            DIVITGN+A  ISSLKTFLQGQF  K
Sbjct: 1049 DIVITGNDALGISSLKTFLQGQFYTK 1074

BLAST of Cmc07g0194331 vs. NCBI nr
Match: XP_031744755.1 (uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 157/206 (76.21%), Postives = 168/206 (81.55%), Query Frame = 0

Query: 1    MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
            MIE+MT L+DNG WDLVSRPAGKKAIGCKWVF +K+N DG VARLKARLVAKGYAQ YG 
Sbjct: 821  MIEEMTALDDNGTWDLVSRPAGKKAIGCKWVFAVKMNPDGTVARLKARLVAKGYAQIYGT 880

Query: 61   DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
            DYS TFSP+AKLTSIRLFLSMA T+ W LHQLDIKN               PP FV  GE
Sbjct: 881  DYSDTFSPVAKLTSIRLFLSMAATNKWSLHQLDIKNAFLHGDLQEEVYMEQPPGFVAQGE 940

Query: 121  SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
            SDKVCRL+KSLY L+QSPRAWFGKFSQALVCF ++KSTSDH VFYRRS  GIVLLVVYVD
Sbjct: 941  SDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIVLLVVYVD 1000

Query: 181  DIVITGNNASSISSLKTFLQGQFIQK 192
            DIVITGN+A  ISSLKTFLQGQF  K
Sbjct: 1001 DIVITGNDALGISSLKTFLQGQFYTK 1026

BLAST of Cmc07g0194331 vs. NCBI nr
Match: XP_031744756.1 (uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus] >XP_031744757.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 157/206 (76.21%), Postives = 168/206 (81.55%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           MIE+MT L+DNG WDLVSRPAGKKAIGCKWVF +K+N DG VARLKARLVAKGYAQ YG 
Sbjct: 683 MIEEMTALDDNGTWDLVSRPAGKKAIGCKWVFAVKMNPDGTVARLKARLVAKGYAQIYGT 742

Query: 61  DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
           DYS TFSP+AKLTSIRLFLSMA T+ W LHQLDIKN               PP FV  GE
Sbjct: 743 DYSDTFSPVAKLTSIRLFLSMAATNKWSLHQLDIKNAFLHGDLQEEVYMEQPPGFVAQGE 802

Query: 121 SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
           SDKVCRL+KSLY L+QSPRAWFGKFSQALVCF ++KSTSDH VFYRRS  GIVLLVVYVD
Sbjct: 803 SDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIVLLVVYVD 862

Query: 181 DIVITGNNASSISSLKTFLQGQFIQK 192
           DIVITGN+A  ISSLKTFLQGQF  K
Sbjct: 863 DIVITGNDALGISSLKTFLQGQFYTK 888

BLAST of Cmc07g0194331 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36
Identity = 81/197 (41.12%), Postives = 112/197 (56.85%), Query Frame = 0

Query: 11   NGIWDLVSRPAGKKAI-GCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGIDYSYTFSPI 70
            N  WDLV  P     I GC+W+F  K N DG + R KARLVAKGY Q  G+DY+ TFSP+
Sbjct: 982  NHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPV 1041

Query: 71   AKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGESDKVCRLQK 130
             K TSIR+ L +A   +WP+ QLD+ N               PP F+     + VC+L+K
Sbjct: 1042 IKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRK 1101

Query: 131  SLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVDDIVITGNNA 190
            +LY L+Q+PRAW+ +    L+      S SD  +F  +    IV ++VYVDDI+ITGN+ 
Sbjct: 1102 ALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDP 1161

Query: 191  SSISSLKTFLQGQFIQK 192
            + + +    L  +F  K
Sbjct: 1162 TLLHNTLDNLSQRFSVK 1178

BLAST of Cmc07g0194331 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36
Identity = 82/197 (41.62%), Postives = 110/197 (55.84%), Query Frame = 0

Query: 11   NGIWDLVSRPAGKKAI-GCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGIDYSYTFSPI 70
            N  WDLV  P     I GC+W+F  K N DG + R KARLVAKGY Q  G+DY+ TFSP+
Sbjct: 965  NHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPV 1024

Query: 71   AKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGESDKVCRLQK 130
             K TSIR+ L +A   +WP+ QLD+ N               PP FV     D VCRL+K
Sbjct: 1025 IKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRK 1084

Query: 131  SLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVDDIVITGNNA 190
            ++Y L+Q+PRAW+ +    L+      S SD  +F  +    I+ ++VYVDDI+ITGN+ 
Sbjct: 1085 AIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDT 1144

Query: 191  SSISSLKTFLQGQFIQK 192
              +      L  +F  K
Sbjct: 1145 VLLKHTLDALSQRFSVK 1161

BLAST of Cmc07g0194331 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36
Identity = 83/207 (40.10%), Postives = 118/207 (57.00%), Query Frame = 0

Query: 1    MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
            M E+M +L  NG + LV  P GK+ + CKWVF +K + D  + R KARLV KG+ Q  GI
Sbjct: 830  MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGI 889

Query: 61   DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIK---------------NPPRFVVHGE 120
            D+   FSP+ K+TSIR  LS+A + +  + QLD+K                P  F V G+
Sbjct: 890  DFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK 949

Query: 121  SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRR-SNNGIVLLVVYV 180
               VC+L KSLY L+Q+PR W+ KF   +      K+ SD  V+++R S N  ++L++YV
Sbjct: 950  KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYV 1009

Query: 181  DDIVITGNNASSISSLKTFLQGQFIQK 192
            DD++I G +   I+ LK  L   F  K
Sbjct: 1010 DDMLIVGKDKGLIAKLKGDLSKSFDMK 1036

BLAST of Cmc07g0194331 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-28
Identity = 66/194 (34.02%), Postives = 106/194 (54.64%), Query Frame = 0

Query: 11   NGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGIDYSYTFSPIA 70
            N  W +  RP  K  +  +WVF +K N  G   R KARLVA+G+ Q Y IDY  TF+P+A
Sbjct: 920  NNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVA 979

Query: 71   KLTSIRLFLSMATTHNWPLHQLDIKNP--------------PRFVVHGESDKVCRLQKSL 130
            +++S R  LS+   +N  +HQ+D+K                P+  +   SD VC+L K++
Sbjct: 980  RISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQ-GISCNSDNVCKLNKAI 1039

Query: 131  YSLRQSPRAWFGKFSQALVCFAVQKSTSDH--FVFYRRSNNGIVLLVVYVDDIVITGNNA 189
            Y L+Q+ R WF  F QAL       S+ D   ++  + + N  + +++YVDD+VI   + 
Sbjct: 1040 YGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDM 1099

BLAST of Cmc07g0194331 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.9e-14
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           M E++  L+ N  W LV  P  +  +GCKWVF  K++ DG + RLKARLVAKG+ Q  GI
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  DYSYTFSPIAKLTSIRLFLSMA 83
            +  T+SP+ +  +IR  L++A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125

BLAST of Cmc07g0194331 vs. ExPASy TrEMBL
Match: A0A438CP53 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1882 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 8.5e-68
Identity = 127/210 (60.48%), Postives = 154/210 (73.33%), Query Frame = 0

Query: 1    MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
            M+E++  L DN  W LV  P GKK +GCKWVF +KVN DG VARLKARLVA+GYAQTYG+
Sbjct: 823  MLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGV 882

Query: 61   DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
            DYS TFSP+AKL S+RLF+S+A +  W +HQLDIKN               PP FV  GE
Sbjct: 883  DYSDTFSPVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQGE 942

Query: 121  SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
              KVCRL+K+LY L+QSPRAWFGKFS+ +  F + KS  DH VFY++S  GI+LLVVYVD
Sbjct: 943  YGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGMNKSEKDHSVFYKKSAAGIILLVVYVD 1002

Query: 181  DIVITGNNASSISSLKTFLQGQFIQKIWVN 196
            DIVITGN+ + IS LKTF+  +FIQ+ WVN
Sbjct: 1003 DIVITGNDHAGISDLKTFMHSKFIQRTWVN 1032

BLAST of Cmc07g0194331 vs. ExPASy TrEMBL
Match: A0A061EJR6 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Theobroma cacao OX=3641 GN=TCM_020052 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 128/206 (62.14%), Postives = 152/206 (73.79%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           ++E+M  L+ NG WD V   AGKK IGCKWVF +KVN DG +ARLKARLVAKGYAQTYG+
Sbjct: 357 IVEEMMALDGNGTWDSVDLLAGKKVIGCKWVFAVKVNPDGSMARLKARLVAKGYAQTYGV 416

Query: 61  DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
           DYS TFSP+AKLTS+RLF+SM  T +WPLHQLDIKN                PRFV  GE
Sbjct: 417 DYSNTFSPVAKLTSVRLFISMVATCDWPLHQLDIKNAFLHGDLQEEVYMEQSPRFVAQGE 476

Query: 121 SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
             KVC L+KSLY L+QSPRAWFGKF++A+  F ++KS  DH VF R S  GI+LL+VYVD
Sbjct: 477 YGKVCHLRKSLYGLKQSPRAWFGKFNEAVQEFGMKKSKCDHLVFCRHSEVGIILLIVYVD 536

Query: 181 DIVITGNNASSISSLKTFLQGQFIQK 192
           DIVITG++ + ISSLK+FL  QF  K
Sbjct: 537 DIVITGSDTAGISSLKSFLHTQFQTK 562

BLAST of Cmc07g0194331 vs. ExPASy TrEMBL
Match: A0A6V7NF38 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS403 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.0e-65
Identity = 129/206 (62.62%), Postives = 151/206 (73.30%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           M E+M  L+ NG W+LV  PA K+AIGCKWVF +K+N DG VARLKARLVAKGYAQTYG+
Sbjct: 100 MEEEMMALDANGTWELVPLPADKRAIGCKWVFTVKMNPDGSVARLKARLVAKGYAQTYGV 159

Query: 61  DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
           DYS TFSP+AKL SIRLF+S+  T +W LHQLDIKN               PP FV  GE
Sbjct: 160 DYSDTFSPVAKLASIRLFISLTATSHWVLHQLDIKNAFLDGDLQEEVYMEQPPGFVAQGE 219

Query: 121 SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
             +VCRL+KSLY L+QSPRAWFG+FS+ +  F ++KS  DH VFYR S   I+LLVVYVD
Sbjct: 220 LGRVCRLRKSLYGLKQSPRAWFGRFSEVVQEFGMKKSKCDHSVFYRHSETSIILLVVYVD 279

Query: 181 DIVITGNNASSISSLKTFLQGQFIQK 192
           DIVITGN+ + ISSLK FLQ QF  K
Sbjct: 280 DIVITGNDTAGISSLKLFLQTQFQTK 305

BLAST of Cmc07g0194331 vs. ExPASy TrEMBL
Match: A0A438IRR9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1320 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.9e-65
Identity = 124/206 (60.19%), Postives = 150/206 (72.82%), Query Frame = 0

Query: 1    MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
            M+E++  L DN  W LV  P GKK +GCKWVF +KVNLDG VARLKARLVA+GYAQTYG+
Sbjct: 827  MLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNLDGSVARLKARLVARGYAQTYGV 886

Query: 61   DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
            DYS TFSP+AKL S+RLF+S+A +  W +HQLDIKN               PP FV  GE
Sbjct: 887  DYSDTFSPVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQGE 946

Query: 121  SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
              KVCRL+K+LY L+QSPRAWFGKFS+ +  F + KS  DH VFY++S  GI+LLVVYVD
Sbjct: 947  YGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGMNKSEKDHSVFYKKSAAGIILLVVYVD 1006

Query: 181  DIVITGNNASSISSLKTFLQGQFIQK 192
            DIVITGN+ + IS LKTF+  +F  K
Sbjct: 1007 DIVITGNDHAGISDLKTFMHSKFHTK 1032

BLAST of Cmc07g0194331 vs. ExPASy TrEMBL
Match: A0A438IJ87 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1287 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.0e-64
Identity = 123/206 (59.71%), Postives = 149/206 (72.33%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           M+E++  L DN  W LV  P GKK +GCKWVF +KVN DG VARLKARLVA+GYAQTYG+
Sbjct: 665 MLEEICALEDNHTWKLVDLPQGKKVVGCKWVFVVKVNPDGSVARLKARLVARGYAQTYGV 724

Query: 61  DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVVHGE 120
           DYS TFSP+AKL S+RLF+S+A +  W +HQLDIKN               PP FV  GE
Sbjct: 725 DYSDTFSPVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQGE 784

Query: 121 SDKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLVVYVD 180
             KVCRL+K+LY L+QSPRAWFGKFS+ +  F + KS  DH VFY++S  GI+LLVVYVD
Sbjct: 785 YGKVCRLKKALYGLKQSPRAWFGKFSKEIQAFGMNKSEKDHSVFYKKSAAGIILLVVYVD 844

Query: 181 DIVITGNNASSISSLKTFLQGQFIQK 192
           DIVITGN+ + IS LKTF+  +F  K
Sbjct: 845 DIVITGNDHAGISDLKTFMHSKFHTK 870

BLAST of Cmc07g0194331 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 164.9 bits (416), Expect = 6.7e-41
Identity = 86/207 (41.55%), Postives = 124/207 (59.90%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           M +++  +     W++ + P  KK IGCKWV+ IK N DG + R KARLVAKGY Q  GI
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161

Query: 61  DYSYTFSPIAKLTSIRLFLSMATTHNWPLHQLDIKN---------------PPRFVV-HG 120
           D+  TFSP+ KLTS++L L+++  +N+ LHQLDI N               PP +    G
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221

Query: 121 ES---DKVCRLQKSLYSLRQSPRAWFGKFSQALVCFAVQKSTSDHFVFYRRSNNGIVLLV 180
           +S   + VC L+KS+Y L+Q+ R WF KFS  L+ F   +S SDH  F + +    + ++
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281

Query: 181 VYVDDIVITGNNASSISSLKTFLQGQF 189
           VYVDDI+I  NN +++  LK+ L+  F
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCF 308

BLAST of Cmc07g0194331 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 78.6 bits (192), Expect = 6.3e-15
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 0

Query: 1   MIEKMTTLNDNGIWDLVSRPAGKKAIGCKWVFFIKVNLDGIVARLKARLVAKGYAQTYGI 60
           M E++  L+ N  W LV  P  +  +GCKWVF  K++ DG + RLKARLVAKG+ Q  GI
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  DYSYTFSPIAKLTSIRLFLSMA 83
            +  T+SP+ +  +IR  L++A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031744754.12.1e-8176.21uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus][more]
XP_031744758.12.1e-8176.21uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus][more]
XP_031744753.12.1e-8176.21uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus][more]
XP_031744755.12.1e-8176.21uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus][more]
XP_031744756.12.1e-8176.21uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus] >XP_031744757.... [more]
Match NameE-valueIdentityDescription
Q94HW21.3e-3641.12Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.3e-3641.62Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P109783.7e-3640.10Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.8e-2834.02Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925208.9e-1445.12Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A438CP538.5e-6860.48Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A061EJR62.3e-6562.14Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Theobroma cacao OX=3641 GN... [more]
A0A6V7NF383.0e-6562.62Reverse transcriptase Ty1/copia-type domain-containing protein OS=Ananas comosus... [more]
A0A438IRR93.9e-6560.19Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438IJ872.0e-6459.71Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
Match NameE-valueIdentityDescription
AT4G23160.16.7e-4141.55cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.16.3e-1545.12Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 11..188
e-value: 2.1E-45
score: 155.2
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 34..181
NoneNo IPR availablePANTHERPTHR11439:SF322CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKEcoord: 34..181
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 11..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0194331.1Cmc07g0194331.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0005488 binding