Cmc07g0194181 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0194181
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr07: 16606429 .. 16606818 (+)
RNA-Seq Expression	Cmc07g0194181
Synteny	Cmc07g0194181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACAATCTCATATCATGGTTCAATAAGAAACAAAATTGCGTATCTCTTTCTACAATGGAGGCTGAATATATTGCGGTTGGAAGTGCATGTACTCAACTTATATGGATGAAGAATATGGTGAAAGAGTATGGCATTCCACAGAATCTTATGACATTGTATTGTGATAATATGAGTGCCATTGATATCTCCAAGAATCTGGTTCAGCACAGCCGAACCAAACATATTGATATCAGGCATCATTTTATTAGGAAGCTTATTGAAGATAAAATTATCAGTTTACAACATATTCGTTCGAATTTACAACTAGCAGATATTTTCACTAAACCCTTTGATGTGAATTTTTTTGAGCATTTACGCGTAGGTTTAGGAGTGTGCAAGATTTAA

mRNA sequence

ATGGGAAACAATCTCATATCATGGTTCAATAAGAAACAAAATTGCGTATCTCTTTCTACAATGGAGGCTGAATATATTGCGGTTGGAAGTGCATGTACTCAACTTATATGGATGAAGAATATGGTGAAAGAGTATGGCATTCCACAGAATCTTATGACATTGTATTGTGATAATATGAGTGCCATTGATATCTCCAAGAATCTGGTTCAGCACAGCCGAACCAAACATATTGATATCAGGCATCATTTTATTAGGAAGCTTATTGAAGATAAAATTATCAGTTTACAACATATTCGTTCGAATTTACAACTAGCAGATATTTTCACTAAACCCTTTGATGTGAATTTTTTTGAGCATTTACGCGTAGGTTTAGGAGTGTGCAAGATTTAA

Coding sequence (CDS)

ATGGGAAACAATCTCATATCATGGTTCAATAAGAAACAAAATTGCGTATCTCTTTCTACAATGGAGGCTGAATATATTGCGGTTGGAAGTGCATGTACTCAACTTATATGGATGAAGAATATGGTGAAAGAGTATGGCATTCCACAGAATCTTATGACATTGTATTGTGATAATATGAGTGCCATTGATATCTCCAAGAATCTGGTTCAGCACAGCCGAACCAAACATATTGATATCAGGCATCATTTTATTAGGAAGCTTATTGAAGATAAAATTATCAGTTTACAACATATTCGTTCGAATTTACAACTAGCAGATATTTTCACTAAACCCTTTGATGTGAATTTTTTTGAGCATTTACGCGTAGGTTTAGGAGTGTGCAAGATTTAA

Protein sequence

MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHLRVGLGVCKI

Homology

[Close]

BLAST of Cmc07g0194181 vs. NCBI nr
Match: KAA0055610.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52
Identity = 101/128 (78.91%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
           +GNNLISW +KKQNCVSLST EAEYIA GS CTQLIWMKNM+ EYG  Q+ MTLYCDN S
Sbjct: 155 LGNNLISWLSKKQNCVSLSTTEAEYIAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDNTS 214

Query: 61  AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
           AIDISKN VQHSRTKHIDIRHHFIR+L+EDK+I L HIRSNLQL DIFTKP D + FE+L
Sbjct: 215 AIDISKNPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLVDIFTKPLDASSFEYL 274

Query: 121 RVGLGVCK 129
           R GLGVC+
Sbjct: 275 RAGLGVCR 282

[Close]

BLAST of Cmc07g0194181 vs. NCBI nr
Match: KAA0048308.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK10653.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 4.6e-48
Identity = 96/124 (77.42%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
           +GNNLISWF+KKQN VSLST EAEYIAVGS CTQLIWMKNM+ EY I Q++MT+YCDNM+
Sbjct: 111 LGNNLISWFSKKQNSVSLSTAEAEYIAVGSGCTQLIWMKNMLHEYEITQDVMTMYCDNMN 170

Query: 61  AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
           AIDISKN +Q SRTK+IDIRHHFIR+LIE+KII+L+HIRSN QLADIFTKP D   F+HL
Sbjct: 171 AIDISKNPIQRSRTKYIDIRHHFIRELIENKIITLEHIRSNSQLADIFTKPLDATTFDHL 230

Query: 121 RVGL 125
           R GL
Sbjct: 231 RAGL 234

[Close]

BLAST of Cmc07g0194181 vs. NCBI nr
Match: AAO73523.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 198.0 bits (502), Expect = 5.1e-47
Identity = 90/127 (70.87%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
            +GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMS
Sbjct: 1445 LGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMS 1504

Query: 61   AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
            AI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +  Q+ADIFTK  D N FE L
Sbjct: 1505 AINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKL 1564

Query: 121  RVGLGVC 128
            R  LG+C
Sbjct: 1565 RGKLGIC 1571

[Close]

BLAST of Cmc07g0194181 vs. NCBI nr
Match: AAO73521.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 198.0 bits (502), Expect = 5.1e-47
Identity = 90/127 (70.87%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
            +GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMS
Sbjct: 1443 LGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMS 1502

Query: 61   AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
            AI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +  Q+ADIFTK  D N FE L
Sbjct: 1503 AINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKL 1562

Query: 121  RVGLGVC 128
            R  LG+C
Sbjct: 1563 RGKLGIC 1569

[Close]

BLAST of Cmc07g0194181 vs. NCBI nr
Match: AAO73527.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 198.0 bits (502), Expect = 5.1e-47
Identity = 90/127 (70.87%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
            +GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMS
Sbjct: 1445 LGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMS 1504

Query: 61   AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
            AI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +  Q+ADIFTK  D N FE L
Sbjct: 1505 AINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKL 1564

Query: 121  RVGLGVC 128
            R  LG+C
Sbjct: 1565 RGKLGIC 1571

[Close]

BLAST of Cmc07g0194181 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-24
Identity = 53/113 (46.90%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 6    ISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDIS 65
            ISW +K Q CV+LST EAEYIA      ++IW+K  ++E G+ Q    +YCD+ SAID+S
Sbjct: 1205 ISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLS 1264

Query: 66   KNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFE 119
            KN + H+RTKHID+R+H+IR++++D+ + +  I +N   AD+ TK    N FE
Sbjct: 1265 KNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFE 1317

[Close]

BLAST of Cmc07g0194181 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 8.5e-21
Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 4    NLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNMSAI 63
            NLI W  K+QN V+ S+ EAEY+A+  A  + +W+K ++    I  +N + +Y DN   I
Sbjct: 1277 NLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCI 1336

Query: 64   DISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHLRV 123
             I+ N   H R KHIDI++HF R+ +++ +I L++I +  QLADIFTKP     F  LR 
Sbjct: 1337 SIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRD 1396

Query: 124  GLGV 127
             LG+
Sbjct: 1397 KLGL 1400

[Close]

BLAST of Cmc07g0194181 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.8e-18
Identity = 48/130 (36.92%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNM 60
            +G++ ISW +KKQ  V  S+ EAEY +V +  ++L W+ +++ E GI   +   +YCDN+
Sbjct: 1317 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNV 1376

Query: 61   SAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEH 120
             A  +  N V HSR KHI + +HFIR  ++   + + H+ ++ QLAD  TKP     F++
Sbjct: 1377 GATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1436

Query: 121  LRVGLGVCKI 130
                +GV K+
Sbjct: 1437 FSRKIGVIKV 1446

[Close]

BLAST of Cmc07g0194181 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17
Identity = 47/130 (36.15%), Postives = 77/130 (59.23%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNM 60
            +G++ ISW +KKQ  V  S+ EAEY +V +  +++ W+ +++ E GI       +YCDN+
Sbjct: 1334 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNV 1393

Query: 61   SAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEH 120
             A  +  N V HSR KHI I +HFIR  ++   + + H+ ++ QLAD  TKP     F++
Sbjct: 1394 GATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQN 1453

Query: 121  LRVGLGVCKI 130
                +GV ++
Sbjct: 1454 FASKIGVTRV 1463

[Close]

BLAST of Cmc07g0194181 vs. ExPASy TrEMBL
Match: A0A5D3DLL1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00150 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.7e-53
Identity = 101/128 (78.91%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
           +GNNLISW +KKQNCVSLST EAEYIA GS CTQLIWMKNM+ EYG  Q+ MTLYCDN S
Sbjct: 155 LGNNLISWLSKKQNCVSLSTTEAEYIAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDNTS 214

Query: 61  AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
           AIDISKN VQHSRTKHIDIRHHFIR+L+EDK+I L HIRSNLQL DIFTKP D + FE+L
Sbjct: 215 AIDISKNPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLVDIFTKPLDASSFEYL 274

Query: 121 RVGLGVCK 129
           R GLGVC+
Sbjct: 275 RAGLGVCR 282

[Close]

BLAST of Cmc07g0194181 vs. ExPASy TrEMBL
Match: A0A5A7TZB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00150 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.2e-48
Identity = 96/124 (77.42%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
           +GNNLISWF+KKQN VSLST EAEYIAVGS CTQLIWMKNM+ EY I Q++MT+YCDNM+
Sbjct: 111 LGNNLISWFSKKQNSVSLSTAEAEYIAVGSGCTQLIWMKNMLHEYEITQDVMTMYCDNMN 170

Query: 61  AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
           AIDISKN +Q SRTK+IDIRHHFIR+LIE+KII+L+HIRSN QLADIFTKP D   F+HL
Sbjct: 171 AIDISKNPIQRSRTKYIDIRHHFIRELIENKIITLEHIRSNSQLADIFTKPLDATTFDHL 230

Query: 121 RVGL 125
           R GL
Sbjct: 231 RAGL 234

[Close]

BLAST of Cmc07g0194181 vs. ExPASy TrEMBL
Match: Q84VI4 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 90/127 (70.87%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
            +GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMS
Sbjct: 1443 LGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMS 1502

Query: 61   AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
            AI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +  Q+ADIFTK  D N FE L
Sbjct: 1503 AINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKL 1562

Query: 121  RVGLGVC 128
            R  LG+C
Sbjct: 1563 RGKLGIC 1569

[Close]

BLAST of Cmc07g0194181 vs. ExPASy TrEMBL
Match: Q84VH8 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 90/127 (70.87%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
            +GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMS
Sbjct: 1445 LGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMS 1504

Query: 61   AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
            AI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +  Q+ADIFTK  D N FE L
Sbjct: 1505 AINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKL 1564

Query: 121  RVGLGVC 128
            R  LG+C
Sbjct: 1565 RGKLGIC 1571

[Close]

BLAST of Cmc07g0194181 vs. ExPASy TrEMBL
Match: Q84VI2 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 90/127 (70.87%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1    MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMS 60
            +GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMS
Sbjct: 1445 LGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMS 1504

Query: 61   AIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLADIFTKPFDVNFFEHL 120
            AI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +  Q+ADIFTK  D N FE L
Sbjct: 1505 AINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKL 1564

Query: 121  RVGLGVC 128
            R  LG+C
Sbjct: 1565 RGKLGIC 1571

[Close]

BLAST of Cmc07g0194181 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 74.3 bits (181), Expect = 7.9e-14
Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 1   MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMT-LYCDNM 60
           +G +LISW +KKQ  VS S+ EAEY A+  A  +++W+    +E  +P +  T L+CDN 
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526

Query: 61  SAIDISKNLVQHSRTKHIDIRHHFIRK 87
           +AI I+ N V H RTKHI+   H +R+
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:

BLAST of Cmc07g0194181 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055610.1	1.8e-52	78.91	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [...	[more]
KAA0048308.1	4.6e-48	77.42	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK10653.1 gag-pol polyprotein [...	[more]
AAO73523.1	5.1e-47	70.87	gag-pol polyprotein [Glycine max]	[more]
AAO73521.1	5.1e-47	70.87	gag-pol polyprotein [Glycine max]	[more]
AAO73527.1	5.1e-47	70.87	gag-pol polyprotein [Glycine max]	[more]

BLAST of Cmc07g0194181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.6e-24	46.90	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	8.5e-21	41.94	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	8.8e-18	36.92	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.5e-17	36.15	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc07g0194181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLL1	8.7e-53	78.91	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G...	[more]
A0A5A7TZB3	2.2e-48	77.42	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G0...	[more]
Q84VI4	2.5e-47	70.87	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]
Q84VH8	2.5e-47	70.87	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]
Q84VI2	2.5e-47	70.87	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]

BLAST of Cmc07g0194181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.9e-14	43.68	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF355	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 3..128
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 3..128
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1..111 e-value: 1.37362E-61 score: 183.438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0194181.1	Cmc07g0194181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0052923	all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding