Cmc07g0193771 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0193771
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 15795500 .. 15795928 (-)
RNA-Seq Expression	Cmc07g0193771
Synteny	Cmc07g0193771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTTGGTCTCACCAATGCCCTTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAAGAGAATCAGTTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGCAATGCCGAAATCAGTCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCATCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTAAAAAACGACGTTCACTGA

mRNA sequence

ATGCCATTTGGTCTCACCAATGCCCTTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAAGAGAATCAGTTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGCAATGCCGAAATCAGTCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCATCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTAAAAAACGACGTTCACTGA

Coding sequence (CDS)

ATGCCATTTGGTCTCACCAATGCCCTTGCCACCTTCTGTACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAAGAGAATCAGTTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGCAATGCCGAAATCAGTCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCATCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTAAAAAACGACGTTCACTGA

Protein sequence

MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYHRFVEGFSKRASPLTELLKNDVH

Homology

[Close]

BLAST of Cmc07g0193771 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 784 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 843

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 844 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 903

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 904 RFVEGFSKRASPLTELLKKDVH 925

[Close]

BLAST of Cmc07g0193771 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. NCBI nr
Match: KAA0063412.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. NCBI nr
Match: KAA0032849.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. NCBI nr
Match: TYK28713.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 59/141 (41.84%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NA ATF   MN +    L+K  +VYLDDI+V+ST+++EH   L  VF+KL +  
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           L ++ +KC F ++   FLGHV+    I     KI AI+ + +P    E+++FLGL  YY 
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFVEGFSKRASPLTELLKNDV 142
           +F+  F+  A P+T+ LK ++
Sbjct: 454 KFIPNFADIAKPMTKCLKKNM 474

[Close]

BLAST of Cmc07g0193771 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NA +TF   M   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   
Sbjct: 718 MPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNEN 777

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           L VK++KC FA E   FLG+ I   +I   + K AAIRD+  PK+V + + FLG+ NYY 
Sbjct: 778 LIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYR 837

Query: 121 RFVEGFSKRASPL 134
           RF+   SK A P+
Sbjct: 838 RFIPNCSKIAQPI 848

[Close]

BLAST of Cmc07g0193771 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NA +TF   M   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   
Sbjct: 744 MPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNEN 803

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           L VK++KC FA E   FLG+ I   +I   + K AAIRD+  PK+V + + FLG+ NYY 
Sbjct: 804 LIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYR 863

Query: 121 RFVEGFSKRASPL 134
           RF+   SK A P+
Sbjct: 864 RFIPNCSKIAQPI 874

[Close]

BLAST of Cmc07g0193771 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.3e-26
Identity = 57/138 (41.30%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NA ATF   MN +    L+K  +VYLDDI+++ST++ EH + +Q VF KL +  
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           L ++ +KC F ++  NFLGH++    I     K+ AI  + +P    E+R+FLGL  YY 
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFVEGFSKRASPLTELLK 139
           +F+  ++  A P+T  LK
Sbjct: 453 KFIPNYADIAKPMTSCLK 470

[Close]

BLAST of Cmc07g0193771 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.5e-22
Identity = 50/138 (36.23%), Postives = 81/138 (58.70%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           +PFGL NA A F  +++ +  E++ K   VY+DDI+V+S   + H  +L+ V   L +  
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           L V  EK  F   ++ FLG+++    I  +  K+ AI +   P SV EL+ FLG+ +YY 
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYR 369

Query: 121 RFVEGFSKRASPLTELLK 139
           +F++ ++K A PLT L +
Sbjct: 370 KFIQDYAKVAKPLTNLTR 387

[Close]

BLAST of Cmc07g0193771 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.9e-73
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.9e-73
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.9e-73
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. ExPASy TrEMBL
Match: A0A5A7T0E2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001310 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.9e-73
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. ExPASy TrEMBL
Match: A0A5D3B7E7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00360 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.9e-73
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYH 120
           LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYY 
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFSKRASPLTELLKNDVH 143
           RFVEGFSKRASPLTELLK DVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0193771 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.9e-17
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 47  DHLQKVFQKLKENQLYVKREKCSFAQERINFLG--HVIECGRIGMEEGKIAAIRDWAMPK 106
           +HL  V Q  +++Q Y  R+KC+F Q +I +LG  H+I    +  +  K+ A+  W  PK
Sbjct: 2   NHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPK 61

Query: 107 SVSELRSFLGLANYYHRFVEGFSKRASPLTELLKND 141
           + +ELR FLGL  YY RFV+ + K   PLTELLK +
Sbjct: 62  NTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN 97

The following BLAST results are available for this feature:

BLAST of Cmc07g0193771 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067557.1	1.0e-72	97.89	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	1.0e-72	97.89	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]
KAA0063412.1	1.0e-72	97.89	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0032849.1	1.0e-72	97.89	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK28713.1	1.0e-72	97.89	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0193771 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	1.1e-26	41.84	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q99315	1.1e-26	46.62	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.1e-26	46.62	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	4.3e-26	41.30	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	6.5e-22	36.23	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc07g0193771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4R1	4.9e-73	97.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	4.9e-73	97.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UXR6	4.9e-73	97.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5A7T0E2	4.9e-73	97.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]
A0A5D3B7E7	4.9e-73	97.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc07g0193771 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.9e-17	42.71	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..81 e-value: 1.7E-18 score: 66.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 12.134958
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 92..142 e-value: 3.4E-18 score: 67.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 2.0E-34 score: 120.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..140
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 1..140
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 1.45166E-41 score: 134.26
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0193771.1	Cmc07g0193771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding