Cmc07g0193751 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0193751
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr07: 15725381 .. 15725920 (+)
RNA-Seq Expression	Cmc07g0193751
Synteny	Cmc07g0193751

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCAAGCAAGAATGGTTAGACCTAGCCACAACCCCTATTCCAGTCCAGTTTTACTAGTGAAGAAAGAGGAGGGAGAATGGAGGTTCTGTGTGGGTTACAGGAAACTCAATCAAGTAACCATTTCTAATAAATTTTTCATTCCTATAATTGAAGAATTATTGGATGAGCTACATAGAGCCAAGGTTTTTCCGAAGCTGGACTTAAAATCTGGGTACCACCAAATTAGAATGAAGGAAAAAGACATAGAGAAGACAGCTTTCAAGACTCATGAAGGCTATTATGAGTTCCTTGTCATGCCTTTTAGCCTCACTAATGCACCAACTACCTTCCAATCCCCAAAGAACCAGGTATTTAAACCTTTCTTAAGGCGCTGTGCATTAGTCTTTTTTTATGATATACTTGTTTATAGTGCTGATATTACCGAGCATGAGAAACATTTGGGAATGGTGTTTGCAGTTTTGAGAGAGAACAGGTTGTTTGCCAACAAAAAGAAGTGTGTGATAGCACACTCGAAGATTCAATATTTGGGGCATTAA

mRNA sequence

ATGCTCCAAGCAAGAATGGTTAGACCTAGCCACAACCCCTATTCCAGTCCAGTTTTACTAGTGAAGAAAGAGGAGGGAGAATGGAGGTTCTGTGTGGGTTACAGGAAACTCAATCAAGTAACCATTTCTAATAAATTTTTCATTCCTATAATTGAAGAATTATTGGATGAGCTACATAGAGCCAAGGTTTTTCCGAAGCTGGACTTAAAATCTGGGTACCACCAAATTAGAATGAAGGAAAAAGACATAGAGAAGACAGCTTTCAAGACTCATGAAGGCTATTATGAGTTCCTTGTCATGCCTTTTAGCCTCACTAATGCACCAACTACCTTCCAATCCCCAAAGAACCAGGTATTTAAACCTTTCTTAAGGCGCTGTGCATTAGTCTTTTTTTATGATATACTTGTTTATAGTGCTGATATTACCGAGCATGAGAAACATTTGGGAATGGTGTTTGCAGTTTTGAGAGAGAACAGGTTGTTTGCCAACAAAAAGAAGTGTGTGATAGCACACTCGAAGATTCAATATTTGGGGCATTAA

Coding sequence (CDS)

ATGCTCCAAGCAAGAATGGTTAGACCTAGCCACAACCCCTATTCCAGTCCAGTTTTACTAGTGAAGAAAGAGGAGGGAGAATGGAGGTTCTGTGTGGGTTACAGGAAACTCAATCAAGTAACCATTTCTAATAAATTTTTCATTCCTATAATTGAAGAATTATTGGATGAGCTACATAGAGCCAAGGTTTTTCCGAAGCTGGACTTAAAATCTGGGTACCACCAAATTAGAATGAAGGAAAAAGACATAGAGAAGACAGCTTTCAAGACTCATGAAGGCTATTATGAGTTCCTTGTCATGCCTTTTAGCCTCACTAATGCACCAACTACCTTCCAATCCCCAAAGAACCAGGTATTTAAACCTTTCTTAAGGCGCTGTGCATTAGTCTTTTTTTATGATATACTTGTTTATAGTGCTGATATTACCGAGCATGAGAAACATTTGGGAATGGTGTTTGCAGTTTTGAGAGAGAACAGGTTGTTTGCCAACAAAAAGAAGTGTGTGATAGCACACTCGAAGATTCAATATTTGGGGCATTAA

Protein sequence

MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHRAKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFKPFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH

Homology

[Close]

BLAST of Cmc07g0193751 vs. NCBI nr
Match: KAE8637561.1 (hypothetical protein CSA_017659 [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 1.7e-80
Identity = 148/179 (82.68%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQA ++RPSH+PYSSPVLLVKK++G WRFCV YRKLNQVTIS+KF IP+IEELLDELH 
Sbjct: 238 MLQAGVIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTISDKFPIPVIEELLDELHG 297

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLD+KS YHQIRM+E+D+EKTAF+THEG+YEFLVMPF LTNAP TFQS  NQVFK
Sbjct: 298 ATVFSKLDMKSDYHQIRMQEEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFK 357

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFF DILVYS DI+EHEKHLGMVFAVLR+N LFANKKKCVIAHSKIQYLGH
Sbjct: 358 PFLRRCVLVFFDDILVYSKDISEHEKHLGMVFAVLRDNHLFANKKKCVIAHSKIQYLGH 416

[Close]

BLAST of Cmc07g0193751 vs. NCBI nr
Match: KAA0055376.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 2.4e-79
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPS +PYSSPVLLVKK+ G WRFCV YRKLNQ TIS+KF IP+IEELLDEL+ 
Sbjct: 620 MLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLNQATISDKFPIPVIEELLDELYG 679

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEFLVMPF LTNAP TFQS  NQVFK
Sbjct: 680 AAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFK 739

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFFYDILVYS DITEHEKHLGMVFAVLR+N+L+AN KKCV AHSKIQYLGH
Sbjct: 740 PFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGH 798

[Close]

BLAST of Cmc07g0193751 vs. NCBI nr
Match: TYJ99303.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 2.4e-79
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPS +PYSSPVLLVKK+ G WRFCV YRKLNQ TIS+KF IP+IEELLDEL+ 
Sbjct: 620 MLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLNQATISDKFPIPVIEELLDELYG 679

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEFLVMPF LTNAP TFQS  NQVFK
Sbjct: 680 AAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFK 739

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFFYDILVYS DITEHEKHLGMVFAVLR+N+L+AN KKCV AHSKIQYLGH
Sbjct: 740 PFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGH 798

[Close]

BLAST of Cmc07g0193751 vs. NCBI nr
Match: KAA0056659.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 142/179 (79.33%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPSH+P+SSPVLLVKK++G WRFCV YRKLN++TI++KF IP+IEELLDELH 
Sbjct: 618 MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEFLVMPF LTNAP TFQS  NQVFK
Sbjct: 678 ATVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFK 737

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFF DILVYS+DITEHEKHLGMVFA LR+N+L+AN+KKCV AHS+I YLGH
Sbjct: 738 PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGH 796

[Close]

BLAST of Cmc07g0193751 vs. NCBI nr
Match: KAA0059481.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 302.0 bits (772), Expect = 3.5e-78
Identity = 141/179 (78.77%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPSH+P+SSPVLLVKK++G WRFCV YRKLN++TI++KF IP+IEELLDELH 
Sbjct: 618 MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEF+VMPF LTNAP TFQS  NQVFK
Sbjct: 678 ATVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSHMNQVFK 737

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFF DILVYS+DITEHEKHLGMVFA LR+N+L+AN+KKCV AHS+I YLGH
Sbjct: 738 PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGH 796

[Close]

BLAST of Cmc07g0193751 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 154.8 bits (390), Expect = 9.0e-37
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           +L  + + PS +P SSPV+LV K++G +R CV YR LN+ TIS+ F +P I+ LL  +  
Sbjct: 619 LLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGN 678

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A++F  LDL SGYHQI M+ KD  KTAF T  G YE+ VMPF L NAP+TF       F+
Sbjct: 679 AQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFR 738

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
               R   V+  DIL++S    EH KHL  V   L+   L   KKKC  A  + ++LG+
Sbjct: 739 DL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 795

[Close]

BLAST of Cmc07g0193751 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 9.0e-37
Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           +L  + + PS +P SSPV+LV K++G +R CV YR LN+ TIS+ F +P I+ LL  +  
Sbjct: 645 LLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGN 704

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A++F  LDL SGYHQI M+ KD  KTAF T  G YE+ VMPF L NAP+TF       F+
Sbjct: 705 AQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFR 764

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
               R   V+  DIL++S    EH KHL  V   L+   L   KKKC  A  + ++LG+
Sbjct: 765 DL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 821

[Close]

BLAST of Cmc07g0193751 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-35
Identity = 72/184 (39.13%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKE-----EGEWRFCVGYRKLNQVTISNKFFIPIIEELL 60
           ML   ++R S++PY+SP  +V K+       ++R  + YRKLN++TI +++ IP ++E+L
Sbjct: 229 MLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEIL 288

Query: 61  DELHRAKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPK 120
            +L + + F  +DL  G+HQI M E+ I KTAF T  G+YE+L MPF L NAP TFQ   
Sbjct: 289 GKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCM 348

Query: 121 NQVFKPFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQ 180
           N + +P L +  LV+  DI+++S  +TEH   + +VF  L +  L     KC     +  
Sbjct: 349 NNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEAN 408

[Close]

BLAST of Cmc07g0193751 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.9e-35
Identity = 72/184 (39.13%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEG-----EWRFCVGYRKLNQVTISNKFFIPIIEELL 60
           ML   ++R S++PY+SP+ +V K++      ++R  + YRKLN++T+ ++  IP ++E+L
Sbjct: 230 MLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEIL 289

Query: 61  DELHRAKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPK 120
            +L R   F  +DL  G+HQI M  + + KTAF T  G+YE+L MPF L NAP TFQ   
Sbjct: 290 GKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCM 349

Query: 121 NQVFKPFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQ 180
           N + +P L +  LV+  DI+V+S  + EH + LG+VF  L +  L     KC     +  
Sbjct: 350 NDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETT 409

[Close]

BLAST of Cmc07g0193751 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.0e-33
Identity = 75/184 (40.76%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKE-----EGEWRFCVGYRKLNQVTISNKFFIPIIEELL 60
           +LQ  ++RPS++PY+SP+ +V K+     E ++R  V +++LN VTI + + IP I   L
Sbjct: 146 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 205

Query: 61  DELHRAKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPK 120
             L  AK F  LDL SG+HQI MKE DI KTAF T  G YEFL +PF L NAP  FQ   
Sbjct: 206 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMI 265

Query: 121 NQVFKPFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQ 180
           + + +  + +   V+  DI+V+S D   H K+L +V A L +  L  N +K     ++++
Sbjct: 266 DDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVE 325

[Close]

BLAST of Cmc07g0193751 vs. ExPASy TrEMBL
Match: A0A5A7UM77 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002210 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPS +PYSSPVLLVKK+ G WRFCV YRKLNQ TIS+KF IP+IEELLDEL+ 
Sbjct: 620 MLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLNQATISDKFPIPVIEELLDELYG 679

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEFLVMPF LTNAP TFQS  NQVFK
Sbjct: 680 AAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFK 739

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFFYDILVYS DITEHEKHLGMVFAVLR+N+L+AN KKCV AHSKIQYLGH
Sbjct: 740 PFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGH 798

[Close]

BLAST of Cmc07g0193751 vs. ExPASy TrEMBL
Match: A0A5D3BJ50 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005160 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPS +PYSSPVLLVKK+ G WRFCV YRKLNQ TIS+KF IP+IEELLDEL+ 
Sbjct: 620 MLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLNQATISDKFPIPVIEELLDELYG 679

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEFLVMPF LTNAP TFQS  NQVFK
Sbjct: 680 AAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFK 739

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFFYDILVYS DITEHEKHLGMVFAVLR+N+L+AN KKCV AHSKIQYLGH
Sbjct: 740 PFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGH 798

[Close]

BLAST of Cmc07g0193751 vs. ExPASy TrEMBL
Match: A0A5A7UT21 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001910 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.8e-79
Identity = 142/179 (79.33%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPSH+P+SSPVLLVKK++G WRFCV YRKLN++TI++KF IP+IEELLDELH 
Sbjct: 618 MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEFLVMPF LTNAP TFQS  NQVFK
Sbjct: 678 ATVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFK 737

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFF DILVYS+DITEHEKHLGMVFA LR+N+L+AN+KKCV AHS+I YLGH
Sbjct: 738 PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGH 796

[Close]

BLAST of Cmc07g0193751 vs. ExPASy TrEMBL
Match: A0A5A7V194 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002120 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.7e-78
Identity = 141/179 (78.77%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPSH+P+SSPVLLVKK++G WRFCV YRKLN++TI++KF IP+IEELLDELH 
Sbjct: 618 MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEF+VMPF LTNAP TFQS  NQVFK
Sbjct: 678 ATVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSHMNQVFK 737

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVFF DILVYS+DITEHEKHLGMVFA LR+N+L+AN+KKCV AHS+I YLGH
Sbjct: 738 PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGH 796

[Close]

BLAST of Cmc07g0193751 vs. ExPASy TrEMBL
Match: A0A5D3CW02 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00980 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.2e-78
Identity = 143/179 (79.89%), Postives = 161/179 (89.94%), Query Frame = 0


Query: 1   MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQVTISNKFFIPIIEELLDELHR 60
           MLQ  ++RPSH+PYSSPVLLVK+++G WRFCV YRKLNQ T+S+KF IP+IEELLDELH 
Sbjct: 581 MLQDGIIRPSHSPYSSPVLLVKEKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHG 640

Query: 61  AKVFPKLDLKSGYHQIRMKEKDIEKTAFKTHEGYYEFLVMPFSLTNAPTTFQSPKNQVFK 120
           A VF KLDLKSGYHQIRMKE+DIEKTAF+THEG+YEFLVMPF LTNA  TFQS  NQVFK
Sbjct: 641 AAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNASATFQSLMNQVFK 700

Query: 121 PFLRRCALVFFYDILVYSADITEHEKHLGMVFAVLRENRLFANKKKCVIAHSKIQYLGH 180
           PFLRRC LVF YDILVYS DI+EHEKHLGMVFA+LR+N+L+AN+KKCV AHSKIQYLGH
Sbjct: 701 PFLRRCVLVFSYDILVYSNDISEHEKHLGMVFALLRDNQLYANQKKCVFAHSKIQYLGH 759

[Close]

BLAST of Cmc07g0193751 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-05
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1  MLQARMVRPSHNPYSSPVLLVKKEEGEWRFCVGYRKLNQ 40
          ML+AR+++PS +PYSSPVLLV+K++G W    G   L Q
Sbjct: 52 MLEARIIQPSISPYSSPVLLVQKKDGGWPTARGLPSLLQ 90

The following BLAST results are available for this feature:

BLAST of Cmc07g0193751 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637561.1	1.7e-80	82.68	hypothetical protein CSA_017659 [Cucumis sativus]	[more]
KAA0055376.1	2.4e-79	82.12	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ99303.1	2.4e-79	82.12	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056659.1	2.0e-78	79.33	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0059481.1	3.5e-78	78.77	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0193751 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	9.0e-37	45.25	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	9.0e-37	45.25	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	1.7e-35	39.13	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.9e-35	39.13	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	6.0e-33	40.76	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc07g0193751 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UM77	1.2e-79	82.12	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BJ50	1.2e-79	82.12	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UT21	9.8e-79	79.33	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7V194	1.7e-78	78.77	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CW02	2.2e-78	79.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cmc07g0193751 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00850.1	3.2e-05	53.85	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 46..179 e-value: 3.4E-66 score: 224.6
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 21..179 e-value: 4.5E-22 score: 78.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 2..179 score: 11.028012
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..106 e-value: 3.4E-66 score: 224.6
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 1..131
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..131
None	No IPR available	CDD	cd01647	RT_LTR	coord: 7..179 e-value: 2.71254E-76 score: 224.012
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0193751.1	Cmc07g0193751.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding