Cmc07g0193281 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0193281
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr07: 14696808 .. 14697566 (-)
RNA-Seq Expression	Cmc07g0193281
Synteny	Cmc07g0193281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTTTTCGTTTATCTAATAAAGTTGAGGTCTCTTCTCTGTCTTGTAATGCGTGCATTCGTGCAGAACAGCATAGGGTCACCTCTCCATCTCAACTTTATAAATTGTCTCAACCTTTCACCCTTATTCGTAGTGATGTTTGGGGTCCCTCGAGTATTACCACCTCTTCAGGGAAACGTTGGTTTGTGACTTTTATTGATGATCAGACCTATTTCACATGGGTTTTTCTCTTCACTGAAAATATGACGTTTCAACAATTTCAAACTACCATTAAGACTCGGTTTACAGCCAAAATTGCTTTTTTAGTAGTGATAATAGTTGTGAGTTCCTTGATAATACTCTTCATGATTTTCTTTCTTCTAAAGGCATTGTCTACCAAAGCTCGTGTGTCTATATCCCTCGACAGAATAAGGTGGCTGAAAGGAACAATTGTTAACTCCTCGAGGTTAACCTCATGTTGTCTACTTCGCTTCCATCATACTTCTGGAGGGATGCAGTTCTCACTAGAACTCATCTTATTAATTGTATGTCTTAACGTGTCTTCCAACTCCAGACCCCTTTTGAATCCCTTAAAGAGTCCTACCCTACCACGTGGCTTATTCTCAATGTCCCTCTTTAGGTTTTTCAGTGCACTGGCTTTGTCCATAGTCATGACCCTTAACCAAACTAAGTTTACTCCTCATGCTCAAAGATGTGTCTTTGTTGGGTATCCCCTTTACCAACGAGGTTATAAATGCTTCCATCTTTCTTCTTAA

mRNA sequence

ATGAAAATTTTTCGTTTATCTAATAAAGTTGAGGTCTCTTCTCTGTCTTGTAATGCGTGCATTCGTGCAGAACAGCATAGGGTCACCTCTCCATCTCAACTTTATAAATTGTCTCAACCTTTCACCCTTATTCGTAGTGATGTTTGGGGTCCCTCGAGTATTACCACCTCTTCAGGGAAACGTTGGTTTGTGACTTTTATTGATGATCAGACCTATTTCACATGGGTTTTTCTCTTCACTGAAAATATGACGTTTCAACAATTTCAAACTACCATTAAGACTCGGTTTACAGCCAAAATTGCTTTTTTAGTAGTGATAATAGTTGTGAGTTCCTTGATAATACTCTTCATGATTTTCTTTCTTCTAAAGGCATTGTCTACCAAAGCTCGTGTGTCTATATCCCTCGACAGAATAAGGTGGCTGAAAGGAACAATTGTTAACTCCTCGAGGTTAACCTCATGTTGTCTACTTCGCTTCCATCATACTTCTGGAGGGATGCAGTTCTCACTAGAACTCATCTTATTAATTGTATGTCTTAACGTGTCTTCCAACTCCAGACCCCTTTTGAATCCCTTAAAGAGTCCTACCCTACCACGTGGCTTATTCTCAATGTCCCTCTTTAGGTTTTTCAGTGCACTGGCTTTGTCCATAGTCATGACCCTTAACCAAACTAAGTTTACTCCTCATGCTCAAAGATGTGTCTTTGTTGGGTATCCCCTTTACCAACGAGGTTATAAATGCTTCCATCTTTCTTCTTAA

Coding sequence (CDS)

ATGAAAATTTTTCGTTTATCTAATAAAGTTGAGGTCTCTTCTCTGTCTTGTAATGCGTGCATTCGTGCAGAACAGCATAGGGTCACCTCTCCATCTCAACTTTATAAATTGTCTCAACCTTTCACCCTTATTCGTAGTGATGTTTGGGGTCCCTCGAGTATTACCACCTCTTCAGGGAAACGTTGGTTTGTGACTTTTATTGATGATCAGACCTATTTCACATGGGTTTTTCTCTTCACTGAAAATATGACGTTTCAACAATTTCAAACTACCATTAAGACTCGGTTTACAGCCAAAATTGCTTTTTTAGTAGTGATAATAGTTGTGAGTTCCTTGATAATACTCTTCATGATTTTCTTTCTTCTAAAGGCATTGTCTACCAAAGCTCGTGTGTCTATATCCCTCGACAGAATAAGGTGGCTGAAAGGAACAATTGTTAACTCCTCGAGGTTAACCTCATGTTGTCTACTTCGCTTCCATCATACTTCTGGAGGGATGCAGTTCTCACTAGAACTCATCTTATTAATTGTATGTCTTAACGTGTCTTCCAACTCCAGACCCCTTTTGAATCCCTTAAAGAGTCCTACCCTACCACGTGGCTTATTCTCAATGTCCCTCTTTAGGTTTTTCAGTGCACTGGCTTTGTCCATAGTCATGACCCTTAACCAAACTAAGTTTACTCCTCATGCTCAAAGATGTGTCTTTGTTGGGTATCCCCTTTACCAACGAGGTTATAAATGCTTCCATCTTTCTTCTTAA

Protein sequence

MKIFRLSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVTFIDDQTYFTWVFLFTENMTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFLLKALSTKARVSISLDRIRWLKGTIVNSSRLTSCCLLRFHHTSGGMQFSLELILLIVCLNVSSNSRPLLNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCVFVGYPLYQRGYKCFHLSS

Homology

[Close]

BLAST of Cmc07g0193281 vs. NCBI nr
Match: KAA0025289.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 5.6e-34
Identity = 118/255 (46.27%), Postives = 137/255 (53.73%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +K++VSSLSC+ CIRA+QHRV+ PSQ YKL+QPFTLI SDVWGPS +TT+SGKRWFVT
Sbjct: 616 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKLTQPFTLIHSDVWGPSKVTTTSGKRWFVT 675

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L T+       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 676 FIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFHTKIA-----ILQSDNGREFQNHNL 735

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L +K  V   S        G     +R L          TS       + IL    L
Sbjct: 736 SEFLVSKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYMWGDAILTAAHL 795

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 796 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 855

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+QRGYKCFH
Sbjct: 856 FVGYPLHQRGYKCFH 865

[Close]

BLAST of Cmc07g0193281 vs. NCBI nr
Match: TYK07380.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 155.2 bits (391), Expect = 7.4e-34
Identity = 118/255 (46.27%), Postives = 137/255 (53.73%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +K++VSSLSC+ CIRA+QHRV+ PSQ YKL+QPFTLI SDVWGPS +TT+SGKRWFVT
Sbjct: 616 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKLTQPFTLIHSDVWGPSKVTTTSGKRWFVT 675

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L T+       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 676 FIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 735

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L +K  V   S        G     +R L          TS       + IL    L
Sbjct: 736 SEFLVSKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYMWGDAILTAAHL 795

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 796 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 855

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+QRGYKCFH
Sbjct: 856 FVGYPLHQRGYKCFH 865

[Close]

BLAST of Cmc07g0193281 vs. NCBI nr
Match: KAA0032571.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK20914.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-33
Identity = 114/255 (44.71%), Postives = 137/255 (53.73%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +K++VSSLSC+ CIRA+QHRV+ PSQ YK +QPFTLI SDVWGPS +TTSSGKRWFVT
Sbjct: 420 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVT 479

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L T+       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 480 FIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 539

Query: 126 LKALSTKARVSISLDRIRWLKGTIV--NSSRLTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L++K  V  +       +  +    +  L          TS       + IL    L
Sbjct: 540 SEFLASKGIVHQTSCAYTPQQNGVAEQKNHHLVEVARSLMLSTSLPSYMWGDAILTAAHL 599

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 600 INRMPSRILQLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 659

Query: 246 FVGYPLYQRGYKCFH 250
           F+GYPL+QRGYKCFH
Sbjct: 660 FIGYPLHQRGYKCFH 669

[Close]

BLAST of Cmc07g0193281 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-32
Identity = 116/255 (45.49%), Postives = 135/255 (52.94%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +KV+VSSLSC+ CIRA+QHRV+ PSQ YK +QPF LI SDVWGPS +TTSSGKRWFVT
Sbjct: 641 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 700

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L ++       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 701 FIDDHTRLTWVYLISDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 760

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L++K  V   S        G     +R L          TS       + IL    L
Sbjct: 761 SEFLASKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYLWGDAILTAAHL 820

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 821 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 880

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+Q GYKCFH
Sbjct: 881 FVGYPLHQHGYKCFH 890

[Close]

BLAST of Cmc07g0193281 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-32
Identity = 116/255 (45.49%), Postives = 135/255 (52.94%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +KV+VSSLSC+ CIRA+QHRV+ PSQ YK +QPF LI SDVWGPS +TTSSGKRWFVT
Sbjct: 641 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 700

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L ++       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 701 FIDDHTRLTWVYLISDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 760

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L++K  V   S        G     +R L          TS       + IL    L
Sbjct: 761 SEFLASKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYLWGDAILTAAHL 820

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 821 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 880

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+Q GYKCFH
Sbjct: 881 FVGYPLHQHGYKCFH 890

[Close]

BLAST of Cmc07g0193281 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 17  CNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVTFIDDQTYFTWV 76
           C+ C+  +QHRV+  +   +      L+ SDV GP  I +  G ++FVTFIDD +   WV
Sbjct: 457 CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWV 516

Query: 77  FLF-TENMTFQQFQ 90
           ++  T++  FQ FQ
Sbjct: 517 YILKTKDQVFQVFQ 530

[Close]

BLAST of Cmc07g0193281 vs. ExPASy TrEMBL
Match: A0A5A7SJ13 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001430 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34
Identity = 118/255 (46.27%), Postives = 137/255 (53.73%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +K++VSSLSC+ CIRA+QHRV+ PSQ YKL+QPFTLI SDVWGPS +TT+SGKRWFVT
Sbjct: 616 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKLTQPFTLIHSDVWGPSKVTTTSGKRWFVT 675

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L T+       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 676 FIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFHTKIA-----ILQSDNGREFQNHNL 735

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L +K  V   S        G     +R L          TS       + IL    L
Sbjct: 736 SEFLVSKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYMWGDAILTAAHL 795

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 796 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 855

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+QRGYKCFH
Sbjct: 856 FVGYPLHQRGYKCFH 865

[Close]

BLAST of Cmc07g0193281 vs. ExPASy TrEMBL
Match: A0A5D3C7S0 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001000 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.6e-34
Identity = 118/255 (46.27%), Postives = 137/255 (53.73%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +K++VSSLSC+ CIRA+QHRV+ PSQ YKL+QPFTLI SDVWGPS +TT+SGKRWFVT
Sbjct: 616 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKLTQPFTLIHSDVWGPSKVTTTSGKRWFVT 675

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L T+       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 676 FIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 735

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L +K  V   S        G     +R L          TS       + IL    L
Sbjct: 736 SEFLVSKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYMWGDAILTAAHL 795

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 796 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 855

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+QRGYKCFH
Sbjct: 856 FVGYPLHQRGYKCFH 865

[Close]

BLAST of Cmc07g0193281 vs. ExPASy TrEMBL
Match: A0A5A7SSP2 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00560 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33
Identity = 114/255 (44.71%), Postives = 137/255 (53.73%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +K++VSSLSC+ CIRA+QHRV+ PSQ YK +QPFTLI SDVWGPS +TTSSGKRWFVT
Sbjct: 420 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTSSGKRWFVT 479

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L T+       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 480 FIDDHTRLTWVYLITDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 539

Query: 126 LKALSTKARVSISLDRIRWLKGTIV--NSSRLTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L++K  V  +       +  +    +  L          TS       + IL    L
Sbjct: 540 SEFLASKGIVHQTSCAYTPQQNGVAEQKNHHLVEVARSLMLSTSLPSYMWGDAILTAAHL 599

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 600 INRMPSRILQLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 659

Query: 246 FVGYPLYQRGYKCFH 250
           F+GYPL+QRGYKCFH
Sbjct: 660 FIGYPLHQRGYKCFH 669

[Close]

BLAST of Cmc07g0193281 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.8e-33
Identity = 116/255 (45.49%), Postives = 135/255 (52.94%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +KV+VSSLSC+ CIRA+QHRV+ PSQ YK +QPF LI SDVWGPS +TTSSGKRWFVT
Sbjct: 641 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 700

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L ++       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 701 FIDDHTRLTWVYLISDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 760

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L++K  V   S        G     +R L          TS       + IL    L
Sbjct: 761 SEFLASKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYLWGDAILTAAHL 820

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 821 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 880

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+Q GYKCFH
Sbjct: 881 FVGYPLHQHGYKCFH 890

[Close]

BLAST of Cmc07g0193281 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.8e-33
Identity = 116/255 (45.49%), Postives = 135/255 (52.94%), Query Frame = 0


Query: 6   LSNKVEVSSLSCNACIRAEQHRVTSPSQLYKLSQPFTLIRSDVWGPSSITTSSGKRWFVT 65
           L +KV+VSSLSC+ CIRA+QHRV+ PSQ YK +QPF LI SDVWGPS +TTSSGKRWFVT
Sbjct: 641 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 700

Query: 66  FIDDQTYFTWVFLFTEN----MTFQQFQTTIKTRFTAKIAFLVVIIVVSSLIILFMIFFL 125
           FIDD T  TWV+L ++       FQ F  TIKT+F  KIA     I+ S     F    L
Sbjct: 701 FIDDHTRLTWVYLISDKSEVPSIFQNFYHTIKTQFHTKIA-----ILRSDNGREFQNHNL 760

Query: 126 LKALSTKARV-SISLDRIRWLKGTIVNSSR-LTSCCLLRFHHTSGGMQFSLELILLIVCL 185
            + L++K  V   S        G     +R L          TS       + IL    L
Sbjct: 761 SEFLASKGIVHQTSCAYTPQQNGVAERKNRHLVEVARSLMLSTSLPSYLWGDAILTAAHL 820

Query: 186 NVSSNSRPL-----LNPLKSPTLPRGLFSMSLFRFFSALALSIVMTLNQTKFTPHAQRCV 245
                SR L     L+ LK       L S    R F   A       NQTKFTP AQ CV
Sbjct: 821 INRMPSRILHLQTPLDCLKESYPSTRLVSEVPLRVFGCTAYVHNFGPNQTKFTPRAQACV 880

Query: 246 FVGYPLYQRGYKCFH 250
           FVGYPL+Q GYKCFH
Sbjct: 881 FVGYPLHQHGYKCFH 890

The following BLAST results are available for this feature:

BLAST of Cmc07g0193281 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025289.1	5.6e-34	46.27	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK07380.1	7.4e-34	46.27	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0032571.1	3.7e-33	44.71	Beta-galactosidase [Cucumis melo var. makuwa] >TYK20914.1 Beta-galactosidase [Cu...	[more]
TYJ99952.1	1.8e-32	45.49	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	1.8e-32	45.49	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0193281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.8e-06	37.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc07g0193281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJ13	2.7e-34	46.27	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G0...	[more]
A0A5D3C7S0	3.6e-34	46.27	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G0...	[more]
A0A5A7SSP2	1.8e-33	44.71	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G0...	[more]
A0A5D3BJK7	8.8e-33	45.49	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	8.8e-33	45.49	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]

BLAST of Cmc07g0193281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 33..109 e-value: 4.1E-6 score: 28.2
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 33..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0193281.1	Cmc07g0193281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding